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The map label for this gene is 159900638

Identifier: 159900638

GI number: 159900638

Start: 5272330

End: 5273958

Strand: Direct

Name: 159900638

Synonym: Haur_4125

Alternate gene names: NA

Gene position: 5272330-5273958 (Clockwise)

Preceding gene: 159900637

Following gene: 159900659

Centisome position: 83.07

GC content: 50.52

Gene sequence:

>1629_bases
GTGGCACTACAATTCCTAAGCCTACCAACAGTTTCATTGCGAAGCTGGGTTTTGGTAGGCTTATTCAGTTTGGGGCTGGT
AGGCTTATTGGGCTTAACCTTGGCAGGCATTCGCCGTTGGAGCAAGCCACGCCAAGCAACTGACGACCATTTGAGCACGA
TTGGCCGCAACACTAGTATTCCCTTTGCTCTACAAATGGCCAGTCGCATGCTTGATTTGGTCTTTGCGATGATTCTTTAT
CGCTTTTTGGCTGCCGAAACCGTTGGAGCCTACGACTTTGCGGCAGTGATTGTCGTCAATTATTTTGGCACAATTGCCGA
TTGGGGCTTAACGGTTTTGGCAACGCACGAAATTGTGCGCCAGCCAAGCCAAGCGCCCCAAACATTTCGCACAACGCTCT
GGCTCCGTTTGCGTTTTGCAATTTTAGCCTTGCCAATTGCCGTGATTTTTGTGCTGATCTACAACGGCTTGGCGCAGGCT
GAGATTACGGCGGTTGGCCTGACCAGTCAGCAAATTACGGTGATCACAATTTTGATGCTGACCTTGTTTCCGGCGGCACT
TTCGGCCAGCGTCACCGCTTGGTTGCAAGGCCACGAGCGCTTGGTCGCGGCTGCGGTCGTCAATCTTTTGACCAATATTG
GGAGTGCAGCATTTCGCTTAACTGCCTTGATTTTGGGCTTTGGCATTATTGGGATTGCTAGCGGAGCCTTGGCGGGAGCA
TTGCTCAGCGCCCTCTTATTTTGGCTGGCGATGCGGCGTTTCTTCCCCGAAGTAGCGTGGTTTGGCCCAACCTTACCCGC
CAAACCCTTGCTCAAAGAGGGCTACCCGCTCTTGCTCAATAGTTTGTTGATGACGATCTTTTTTCGTTTCGACACCATTT
TGTTGAGCGCCTTCCACGGCTTTGTGGTCTCGGCAACCTATGGCGTAGCCTATAAACTGATTAATTTCACCCAAATTGTG
CCGCCAATTGTGGTTAACGCGATTTTCCCGACGCTAATTCGCCGTTCCGGCGATGATCGAGCTGGAATGAGTCGGGCTTA
TGCTGGCACATTGCGTATGTTGCTGAATTTAGCGTTTGGCATCGCCGTTGTGGCTACAATTATCGCTGTGCCACTAACCA
CATGGCTCGCCGATCGGCCTGAATATTTGCCAGGCAGCGTCTATGCCTTGATGATTACGATTTGGTATTTACCAGGCAGC
TATCTGAATGGCCTGACTCAATATGTGATTATCGCGCTGGGCAAGAAACAGGCAATTACTAAGGCTTTTGGTTTAACTGC
AATGGTCAATTTGGGCTTGAATATTTGGTTGATTCCACGCTATAGCTATTTTGCCGCCGCCGCAATCACGATTGTTTCTG
AGCTTGTGTTATTTTTGCCGCTCTGGCTGGTACTACGCCGCGAACAGATTAACATCAACTTGGCGAGTTTATTTTGGCGG
CCTGCGCTGGCAGCATTGCTGGCTGGTGGTATCGGCTGGTTGTTGCTCAGCATCAATGTGTATTTGGCAGGAGTCGTAAC
CGGATTAATCTATGGCGCTGGCTTATGGTTCAGCGGCAGCATCGGCCAAACAGAACGCGAATTGGCTGCGCGGATGTTTA
AAAAGTTACGCCCCCAAGCATCAAGCTGA

Upstream 100 bases:

>100_bases
TGCCTGAATGGCGACCGTTCAATGTGCGCGTGCTGCCGCAAATGCATGTGCTGATTTGGGGCCAAAAACGGCTTGTCTAA
TGCTTCCAAGGGAGTTCTGT

Downstream 100 bases:

>100_bases
TTCTAGCGGCGCTAGCACTCGATCACCATGGCTATTTGGTTGCGAAATCAGCAAAAAATGCAGCTCATCTGGGCCTTGAT
TGCTCAATTGATGGGCTGCT

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: Lipopolysaccharide O-Side Chain Biosynthesis Protein; O-Antigen Transporter Related Protein; Heteropolysaccharide Repeat-Containing Protein; MatE Family; Capsular Polysaccharide Biosynthesis Protein

Number of amino acids: Translated: 542; Mature: 541

Protein sequence:

>542_residues
MALQFLSLPTVSLRSWVLVGLFSLGLVGLLGLTLAGIRRWSKPRQATDDHLSTIGRNTSIPFALQMASRMLDLVFAMILY
RFLAAETVGAYDFAAVIVVNYFGTIADWGLTVLATHEIVRQPSQAPQTFRTTLWLRLRFAILALPIAVIFVLIYNGLAQA
EITAVGLTSQQITVITILMLTLFPAALSASVTAWLQGHERLVAAAVVNLLTNIGSAAFRLTALILGFGIIGIASGALAGA
LLSALLFWLAMRRFFPEVAWFGPTLPAKPLLKEGYPLLLNSLLMTIFFRFDTILLSAFHGFVVSATYGVAYKLINFTQIV
PPIVVNAIFPTLIRRSGDDRAGMSRAYAGTLRMLLNLAFGIAVVATIIAVPLTTWLADRPEYLPGSVYALMITIWYLPGS
YLNGLTQYVIIALGKKQAITKAFGLTAMVNLGLNIWLIPRYSYFAAAAITIVSELVLFLPLWLVLRREQININLASLFWR
PALAALLAGGIGWLLLSINVYLAGVVTGLIYGAGLWFSGSIGQTERELAARMFKKLRPQASS

Sequences:

>Translated_542_residues
MALQFLSLPTVSLRSWVLVGLFSLGLVGLLGLTLAGIRRWSKPRQATDDHLSTIGRNTSIPFALQMASRMLDLVFAMILY
RFLAAETVGAYDFAAVIVVNYFGTIADWGLTVLATHEIVRQPSQAPQTFRTTLWLRLRFAILALPIAVIFVLIYNGLAQA
EITAVGLTSQQITVITILMLTLFPAALSASVTAWLQGHERLVAAAVVNLLTNIGSAAFRLTALILGFGIIGIASGALAGA
LLSALLFWLAMRRFFPEVAWFGPTLPAKPLLKEGYPLLLNSLLMTIFFRFDTILLSAFHGFVVSATYGVAYKLINFTQIV
PPIVVNAIFPTLIRRSGDDRAGMSRAYAGTLRMLLNLAFGIAVVATIIAVPLTTWLADRPEYLPGSVYALMITIWYLPGS
YLNGLTQYVIIALGKKQAITKAFGLTAMVNLGLNIWLIPRYSYFAAAAITIVSELVLFLPLWLVLRREQININLASLFWR
PALAALLAGGIGWLLLSINVYLAGVVTGLIYGAGLWFSGSIGQTERELAARMFKKLRPQASS
>Mature_541_residues
ALQFLSLPTVSLRSWVLVGLFSLGLVGLLGLTLAGIRRWSKPRQATDDHLSTIGRNTSIPFALQMASRMLDLVFAMILYR
FLAAETVGAYDFAAVIVVNYFGTIADWGLTVLATHEIVRQPSQAPQTFRTTLWLRLRFAILALPIAVIFVLIYNGLAQAE
ITAVGLTSQQITVITILMLTLFPAALSASVTAWLQGHERLVAAAVVNLLTNIGSAAFRLTALILGFGIIGIASGALAGAL
LSALLFWLAMRRFFPEVAWFGPTLPAKPLLKEGYPLLLNSLLMTIFFRFDTILLSAFHGFVVSATYGVAYKLINFTQIVP
PIVVNAIFPTLIRRSGDDRAGMSRAYAGTLRMLLNLAFGIAVVATIIAVPLTTWLADRPEYLPGSVYALMITIWYLPGSY
LNGLTQYVIIALGKKQAITKAFGLTAMVNLGLNIWLIPRYSYFAAAAITIVSELVLFLPLWLVLRREQININLASLFWRP
ALAALLAGGIGWLLLSINVYLAGVVTGLIYGAGLWFSGSIGQTERELAARMFKKLRPQASS

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59086; Mature: 58955

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALQFLSLPTVSLRSWVLVGLFSLGLVGLLGLTLAGIRRWSKPRQATDDHLSTIGRNTSI
CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCC
PFALQMASRMLDLVFAMILYRFLAAETVGAYDFAAVIVVNYFGTIADWGLTVLATHEIVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QPSQAPQTFRTTLWLRLRFAILALPIAVIFVLIYNGLAQAEITAVGLTSQQITVITILML
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCCHHHHHHHHHH
TLFPAALSASVTAWLQGHERLVAAAVVNLLTNIGSAAFRLTALILGFGIIGIASGALAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSALLFWLAMRRFFPEVAWFGPTLPAKPLLKEGYPLLLNSLLMTIFFRFDTILLSAFHG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FVVSATYGVAYKLINFTQIVPPIVVNAIFPTLIRRSGDDRAGMSRAYAGTLRMLLNLAFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
IAVVATIIAVPLTTWLADRPEYLPGSVYALMITIWYLPGSYLNGLTQYVIIALGKKQAIT
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH
KAFGLTAMVNLGLNIWLIPRYSYFAAAAITIVSELVLFLPLWLVLRREQININLASLFWR
HHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
PALAALLAGGIGWLLLSINVYLAGVVTGLIYGAGLWFSGSIGQTERELAARMFKKLRPQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC
SS
CC
>Mature Secondary Structure 
ALQFLSLPTVSLRSWVLVGLFSLGLVGLLGLTLAGIRRWSKPRQATDDHLSTIGRNTSI
CCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCC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CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA