| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900599
Identifier: 159900599
GI number: 159900599
Start: 5219476
End: 5220108
Strand: Direct
Name: 159900599
Synonym: Haur_4086
Alternate gene names: NA
Gene position: 5219476-5220108 (Clockwise)
Preceding gene: 159900598
Following gene: 159900600
Centisome position: 82.24
GC content: 51.82
Gene sequence:
>633_bases TTGAGTACTGTCATTGAAGAACCGCCGATTGTCGGTTTGTGTCGTTGGTTGAAATTGCTTGATGAATGGGCTACGTTTTA CGAAACTGACCCCAAATCCGAACGCACGCCTAGCCGTGAAGACCTCAGCGCCTTTGATCGGGCGCAATCCCTCTATTTGC TCAAAGAACGGGCGATTCAAACGCTGTATCTCAGCGAATCGCCCTCGGTTAGTTTGGGTATTCTCGAAGGCCCAACGCCT AAAACGCGAATTTGGCTCTGTGAGAATTGCCGTAATCAAGCTCGCCGAGCCAACCTATCGCCCGCTGAATATGCAGAACT TTCCGGTGGTTGCGCTAAATGCCAACGCGAAGGCCTCGAAAACGATTATTATAGTTTGTACATATTGAATGTTGATTATG GTGCGCTGGGCAACTGGCAGTTTCATACGCCAGTGCCAATTGGCCAGAGCTATTTTCCTGCACCACGCTCGGAAGCAGCG CCCGTAGTTGGCCGCCGCCCAGTTGATCGCCAAGGTAAAATGACCCGCCTCGGCCAGCCGATAAGCGCCGCTAACCGCCG CCAATACCCTGAGCATAGCGTTGTTTGGCATGTCTGGGATGCGATTAAAACGCTCAAAGCGGAGATTGTCTAA
Upstream 100 bases:
>100_bases AGAGCCATGGGATGCCTTTTGGGGTCAGCGTTATGCCGTGGTGCTTGATCCCGATGGAAATTTGATTGATTTGTTTGCGC CGCTCGATTGAGGAGGCTCG
Downstream 100 bases:
>100_bases ATGCAAAAATCAATTTGGTTGGTGTTGATCTTGATATTAGCCAGTTGTGGTGCGGAGATTATTACTCCGCAAGCACCATA TCAGGTGATCGAGGTGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MSTVIEEPPIVGLCRWLKLLDEWATFYETDPKSERTPSREDLSAFDRAQSLYLLKERAIQTLYLSESPSVSLGILEGPTP KTRIWLCENCRNQARRANLSPAEYAELSGGCAKCQREGLENDYYSLYILNVDYGALGNWQFHTPVPIGQSYFPAPRSEAA PVVGRRPVDRQGKMTRLGQPISAANRRQYPEHSVVWHVWDAIKTLKAEIV
Sequences:
>Translated_210_residues MSTVIEEPPIVGLCRWLKLLDEWATFYETDPKSERTPSREDLSAFDRAQSLYLLKERAIQTLYLSESPSVSLGILEGPTP KTRIWLCENCRNQARRANLSPAEYAELSGGCAKCQREGLENDYYSLYILNVDYGALGNWQFHTPVPIGQSYFPAPRSEAA PVVGRRPVDRQGKMTRLGQPISAANRRQYPEHSVVWHVWDAIKTLKAEIV >Mature_209_residues STVIEEPPIVGLCRWLKLLDEWATFYETDPKSERTPSREDLSAFDRAQSLYLLKERAIQTLYLSESPSVSLGILEGPTPK TRIWLCENCRNQARRANLSPAEYAELSGGCAKCQREGLENDYYSLYILNVDYGALGNWQFHTPVPIGQSYFPAPRSEAAP VVGRRPVDRQGKMTRLGQPISAANRRQYPEHSVVWHVWDAIKTLKAEIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23842; Mature: 23711
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVIEEPPIVGLCRWLKLLDEWATFYETDPKSERTPSREDLSAFDRAQSLYLLKERAIQ CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TLYLSESPSVSLGILEGPTPKTRIWLCENCRNQARRANLSPAEYAELSGGCAKCQREGLE EEEECCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHCCCC NDYYSLYILNVDYGALGNWQFHTPVPIGQSYFPAPRSEAAPVVGRRPVDRQGKMTRLGQP CCCEEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC ISAANRRQYPEHSVVWHVWDAIKTLKAEIV HHHHHHCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STVIEEPPIVGLCRWLKLLDEWATFYETDPKSERTPSREDLSAFDRAQSLYLLKERAIQ CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TLYLSESPSVSLGILEGPTPKTRIWLCENCRNQARRANLSPAEYAELSGGCAKCQREGLE EEEECCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHCCCC NDYYSLYILNVDYGALGNWQFHTPVPIGQSYFPAPRSEAAPVVGRRPVDRQGKMTRLGQP CCCEEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC ISAANRRQYPEHSVVWHVWDAIKTLKAEIV HHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA