| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900600
Identifier: 159900600
GI number: 159900600
Start: 5220109
End: 5220633
Strand: Direct
Name: 159900600
Synonym: Haur_4087
Alternate gene names: NA
Gene position: 5220109-5220633 (Clockwise)
Preceding gene: 159900599
Following gene: 159900602
Centisome position: 82.25
GC content: 48.76
Gene sequence:
>525_bases ATGCAAAAATCAATTTGGTTGGTGTTGATCTTGATATTAGCCAGTTGTGGTGCGGAGATTATTACTCCGCAAGCACCATA TCAGGTGATCGAGGTGTTGCAAACGGTCGATAGCCAGCATGCCCAGGTCGAGCTGCGCCTGGAACGTGATAGCACCAACC AAATGATTTTGGCCGCAACCTATCAACCCAAAGAACCACATTTGCACTTGTATTCCAAAGATTTGCCGCGCAATGGGGTG GATGGCTTGGGTCGGCCAACCCTGCTTGAGCTAAGTCAGGCTGGTCAAATACGCTCAATTGGGCCAATTGTGGCCGATGC GATTGCCGCGCCCGATCCAACAATTGAAACTGCCAAATTGTTGATTTACCCAGCGGGGCCAGTAACCTTACGCATGCCAG TTGAACTTGATTTGCAACAGCCAAATCAGCAAATTTTGCTGACGTTTATGCTCTGTAGCAGCAAAGGTTACTGTACCTCG TCGGTCGAACAATTGCCAGTCACAATTCAGCTAAGCAACTCCTAG
Upstream 100 bases:
>100_bases CCAGCCGATAAGCGCCGCTAACCGCCGCCAATACCCTGAGCATAGCGTTGTTTGGCATGTCTGGGATGCGATTAAAACGC TCAAAGCGGAGATTGTCTAA
Downstream 100 bases:
>100_bases CAGCGTGGGCAATAGCTCTTCAGCTCGCCCGATCTGCTGTTCTTCAAAGGCTGAATCGTCGGCAGCATGTGGCTCCAAAT TGACCAACATTGTGCGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MQKSIWLVLILILASCGAEIITPQAPYQVIEVLQTVDSQHAQVELRLERDSTNQMILAATYQPKEPHLHLYSKDLPRNGV DGLGRPTLLELSQAGQIRSIGPIVADAIAAPDPTIETAKLLIYPAGPVTLRMPVELDLQQPNQQILLTFMLCSSKGYCTS SVEQLPVTIQLSNS
Sequences:
>Translated_174_residues MQKSIWLVLILILASCGAEIITPQAPYQVIEVLQTVDSQHAQVELRLERDSTNQMILAATYQPKEPHLHLYSKDLPRNGV DGLGRPTLLELSQAGQIRSIGPIVADAIAAPDPTIETAKLLIYPAGPVTLRMPVELDLQQPNQQILLTFMLCSSKGYCTS SVEQLPVTIQLSNS >Mature_174_residues MQKSIWLVLILILASCGAEIITPQAPYQVIEVLQTVDSQHAQVELRLERDSTNQMILAATYQPKEPHLHLYSKDLPRNGV DGLGRPTLLELSQAGQIRSIGPIVADAIAAPDPTIETAKLLIYPAGPVTLRMPVELDLQQPNQQILLTFMLCSSKGYCTS SVEQLPVTIQLSNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19066; Mature: 19066
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKSIWLVLILILASCGAEIITPQAPYQVIEVLQTVDSQHAQVELRLERDSTNQMILAAT CCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEE YQPKEPHLHLYSKDLPRNGVDGLGRPTLLELSQAGQIRSIGPIVADAIAAPDPTIETAKL CCCCCCCEEEEECCCCCCCCCCCCCCCEEEHHCCCCCCCCCHHHHHHHCCCCCCCCEEEE LIYPAGPVTLRMPVELDLQQPNQQILLTFMLCSSKGYCTSSVEQLPVTIQLSNS EEEECCCEEEEEEEEECCCCCCHHHEEEEEECCCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MQKSIWLVLILILASCGAEIITPQAPYQVIEVLQTVDSQHAQVELRLERDSTNQMILAAT CCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEE YQPKEPHLHLYSKDLPRNGVDGLGRPTLLELSQAGQIRSIGPIVADAIAAPDPTIETAKL CCCCCCCEEEEECCCCCCCCCCCCCCCEEEHHCCCCCCCCCHHHHHHHCCCCCCCCEEEE LIYPAGPVTLRMPVELDLQQPNQQILLTFMLCSSKGYCTSSVEQLPVTIQLSNS EEEECCCEEEEEEEEECCCCCCHHHEEEEEECCCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA