| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900588
Identifier: 159900588
GI number: 159900588
Start: 5201374
End: 5202246
Strand: Direct
Name: 159900588
Synonym: Haur_4075
Alternate gene names: NA
Gene position: 5201374-5202246 (Clockwise)
Preceding gene: 159900587
Following gene: 159900589
Centisome position: 81.96
GC content: 50.52
Gene sequence:
>873_bases ATGGAAATGCGCGATGATGCGCGGCTCGCCGATGAAGTCGAGAAGCTAAGCCATACAGCGGATACGCTTTCGCTTGATAC GAAAGACCGTATGCGCGATGTTGTTGCTCCTAAAATTGAGGCTGCGGTTGCCCAACGTGAGGCAATGGTCGCCGAATTAA CTAGCCAACCTGTCCAGGCTCCAGCCAGCGAATTAGCCAAGGCTGATCCCCGCCGTGTGACAATTACCCAAGTGCGCAAT CATCCCCATACCTATGCCTACCTTGATGCTGCCAATAATCAGCTTAAGTTGATTGGCTATACTGAGCATGGCCGTCGCCA TGCATCTTTAGTTGGCCATATTGGGGCAAATGTGTTGCGCCGCCTAAAGTTTTCGGCTCGCGAGATTGAGCTGGCCGAAA TTGCGGGCGTGTTGCACGACATTGGCAATAGCATCAATCGCAATGATCATGGCCAAACTGGGGCGATTTTGGCCAAAGAT ATTTTGAGCAGCCTCGATATGCCAATCGACGAGATCATCACGATTATGGGCGCGATTGGTAATCACGAGGAAGAACGCGG CCATGCGGTTTCAACCGTGGCAGCGGCACTGATTTTGGCCGATAAATCTGATGTGCATCGTTCGCGGGTGCAAAACAGCG ATCCCACCACCTTTGATATTCATGATCGAGTTAATTACGCCGCGACCAAATCATTTTTACGGGTTGATACTGAGCAACGC CGTGTTACACTGCAATTAACCATCGACACCGAGATGGCCTCGGTGATGGATTATTTTGAGATTTTTCTTTCACGAATGGT AATGTGCCGCCGTGCTGCTGAGTTTCTTGGTAGCCGCTTTGGCCTCTCGATTAACGATGTATCGGTGTTGTAG
Upstream 100 bases:
>100_bases AATTGACGTTTATGCAAGCTGGCAGTGATTGCTGGCCCATTCATTGAAGTAATGAACTGATTAGCCCTGAGCTACTGTTG TTGCTTCAGCGAGGTTCTCT
Downstream 100 bases:
>100_bases CTGCTACGCTAGCTGGCTCACCAAGCGCAAGTTGAACGCGCTTGTGCTGGTTGTAGCCGCTACGGCAGCTTATTTTTATT TCTCTTTATCTAAAGGAGCC
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: HDIG Domain-Containing Protein; Metal-Dependent Phosphohydrolase HD Sub Domain
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MEMRDDARLADEVEKLSHTADTLSLDTKDRMRDVVAPKIEAAVAQREAMVAELTSQPVQAPASELAKADPRRVTITQVRN HPHTYAYLDAANNQLKLIGYTEHGRRHASLVGHIGANVLRRLKFSAREIELAEIAGVLHDIGNSINRNDHGQTGAILAKD ILSSLDMPIDEIITIMGAIGNHEEERGHAVSTVAAALILADKSDVHRSRVQNSDPTTFDIHDRVNYAATKSFLRVDTEQR RVTLQLTIDTEMASVMDYFEIFLSRMVMCRRAAEFLGSRFGLSINDVSVL
Sequences:
>Translated_290_residues MEMRDDARLADEVEKLSHTADTLSLDTKDRMRDVVAPKIEAAVAQREAMVAELTSQPVQAPASELAKADPRRVTITQVRN HPHTYAYLDAANNQLKLIGYTEHGRRHASLVGHIGANVLRRLKFSAREIELAEIAGVLHDIGNSINRNDHGQTGAILAKD ILSSLDMPIDEIITIMGAIGNHEEERGHAVSTVAAALILADKSDVHRSRVQNSDPTTFDIHDRVNYAATKSFLRVDTEQR RVTLQLTIDTEMASVMDYFEIFLSRMVMCRRAAEFLGSRFGLSINDVSVL >Mature_290_residues MEMRDDARLADEVEKLSHTADTLSLDTKDRMRDVVAPKIEAAVAQREAMVAELTSQPVQAPASELAKADPRRVTITQVRN HPHTYAYLDAANNQLKLIGYTEHGRRHASLVGHIGANVLRRLKFSAREIELAEIAGVLHDIGNSINRNDHGQTGAILAKD ILSSLDMPIDEIITIMGAIGNHEEERGHAVSTVAAALILADKSDVHRSRVQNSDPTTFDIHDRVNYAATKSFLRVDTEQR RVTLQLTIDTEMASVMDYFEIFLSRMVMCRRAAEFLGSRFGLSINDVSVL
Specific function: Unknown
COG id: COG3294
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32191; Mature: 32191
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMRDDARLADEVEKLSHTADTLSLDTKDRMRDVVAPKIEAAVAQREAMVAELTSQPVQA CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PASELAKADPRRVTITQVRNHPHTYAYLDAANNQLKLIGYTEHGRRHASLVGHIGANVLR CHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHH RLKFSAREIELAEIAGVLHDIGNSINRNDHGQTGAILAKDILSSLDMPIDEIITIMGAIG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHC NHEEERGHAVSTVAAALILADKSDVHRSRVQNSDPTTFDIHDRVNYAATKSFLRVDTEQR CCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCC RVTLQLTIDTEMASVMDYFEIFLSRMVMCRRAAEFLGSRFGLSINDVSVL EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECC >Mature Secondary Structure MEMRDDARLADEVEKLSHTADTLSLDTKDRMRDVVAPKIEAAVAQREAMVAELTSQPVQA CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PASELAKADPRRVTITQVRNHPHTYAYLDAANNQLKLIGYTEHGRRHASLVGHIGANVLR CHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHH RLKFSAREIELAEIAGVLHDIGNSINRNDHGQTGAILAKDILSSLDMPIDEIITIMGAIG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHC NHEEERGHAVSTVAAALILADKSDVHRSRVQNSDPTTFDIHDRVNYAATKSFLRVDTEQR CCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCC RVTLQLTIDTEMASVMDYFEIFLSRMVMCRRAAEFLGSRFGLSINDVSVL EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA