| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is rsrIM [H]
Identifier: 159900577
GI number: 159900577
Start: 5189510
End: 5190355
Strand: Direct
Name: rsrIM [H]
Synonym: Haur_4064
Alternate gene names: 159900577
Gene position: 5189510-5190355 (Clockwise)
Preceding gene: 159900576
Following gene: 159900579
Centisome position: 81.77
GC content: 47.4
Gene sequence:
>846_bases ATGAATAAACTTTATTTTGGCGATAATTTGGCTGTTTTGGCAACCCTGCCAGCGGCCAGCTATGATTTAATTTATATTGA CCCGCCCTTCAACACTGGCAAAATCCAAAGTCGCACCCAACTGCGCACGGTTCGCTCCGAGCAAGGTGATCGGGTTGGCT TTGGTGGTCATCGTTATAGCAGCATCAAAATTGGCGAGCGAGCCTATGGCGATAGCTTTGACGATTTTCTGGCATTTATT GAGCCGCGTTTGCTTGAAGCTTACCGTTTGCTGAAACCCCAAGGCAGCTTCTTTTTTCACATCGATTATCGTGAAGTCCA TTATTGCAAGGTATTGATCGACCAAATTTTTGGCCGTGATTCGTTTATCAACGAAATTATTTGGGCCTACGATTATGGCG CTCGGTCGCGCAAAAAATGGTCAACCAAGCACGATACCATCTTGTGGTATGCCAAAGATCCCGAAAACTATACCTTTAAT TATGATCAGATTGATCGCATTCCCTATATGGCTCCAGGTTTGGTTGGCCCCGAAAAGGCTGCCCGTGGCAAAACGCCGAC CGATGTTTGGTGGAACACGATTGTTAGCCCCAATGGCAAGGAAAAAACTGGCTATCCGACCCAAAAACCACTAGCAATTC TCAACCGGATTGTGCGCGTCCACTCCAACCCCAACGATCAACTGCTCGATTTCTTTGCTGGCAGCGGCTCGTTTGGTGAG GCGGCTGCGCGGAATGGCCGTAATTTCACCTTGATCGACCAAAATCCCCAAGCAATTGAGGTGATGCGCCAACGTTTGGC CTTCGCTGAGCCAGAATTTTACGAAATACCCAAGGATATAATTTAA
Upstream 100 bases:
>100_bases AGTGGCTGTGATTCGGCAATTTTACGGGCTTGGTTGGAAGGCAAGCGTTCATTGAGTGAAGCCGAACGCTTAGCGATTGA GGAAGCATTAACATCACACC
Downstream 100 bases:
>100_bases CCACGAAGGACACGAAGTTTCACTAAGGTTTGGGTTATTGGTTCTCTGATGTCTTGTACAAAACTCAGGTTTCCAACGAG CCTAACATTCGTGCTCTTCG
Product: site-specific DNA-methyltransferase
Products: NA
Alternate protein names: M.RsrI; Adenine-specific methyltransferase RsrI [H]
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MNKLYFGDNLAVLATLPAASYDLIYIDPPFNTGKIQSRTQLRTVRSEQGDRVGFGGHRYSSIKIGERAYGDSFDDFLAFI EPRLLEAYRLLKPQGSFFFHIDYREVHYCKVLIDQIFGRDSFINEIIWAYDYGARSRKKWSTKHDTILWYAKDPENYTFN YDQIDRIPYMAPGLVGPEKAARGKTPTDVWWNTIVSPNGKEKTGYPTQKPLAILNRIVRVHSNPNDQLLDFFAGSGSFGE AAARNGRNFTLIDQNPQAIEVMRQRLAFAEPEFYEIPKDII
Sequences:
>Translated_281_residues MNKLYFGDNLAVLATLPAASYDLIYIDPPFNTGKIQSRTQLRTVRSEQGDRVGFGGHRYSSIKIGERAYGDSFDDFLAFI EPRLLEAYRLLKPQGSFFFHIDYREVHYCKVLIDQIFGRDSFINEIIWAYDYGARSRKKWSTKHDTILWYAKDPENYTFN YDQIDRIPYMAPGLVGPEKAARGKTPTDVWWNTIVSPNGKEKTGYPTQKPLAILNRIVRVHSNPNDQLLDFFAGSGSFGE AAARNGRNFTLIDQNPQAIEVMRQRLAFAEPEFYEIPKDII >Mature_281_residues MNKLYFGDNLAVLATLPAASYDLIYIDPPFNTGKIQSRTQLRTVRSEQGDRVGFGGHRYSSIKIGERAYGDSFDDFLAFI EPRLLEAYRLLKPQGSFFFHIDYREVHYCKVLIDQIFGRDSFINEIIWAYDYGARSRKKWSTKHDTILWYAKDPENYTFN YDQIDRIPYMAPGLVGPEKAARGKTPTDVWWNTIVSPNGKEKTGYPTQKPLAILNRIVRVHSNPNDQLLDFFAGSGSFGE AAARNGRNFTLIDQNPQAIEVMRQRLAFAEPEFYEIPKDII
Specific function: This methylase recognizes the double-stranded sequence GAATTC, causes specific methylation on A-? on both strands, and protects the DNA from cleavage by the RsrI endonuclease [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI87082238, Length=279, Percent_Identity=31.1827956989247, Blast_Score=112, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 32329; Mature: 32329
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLYFGDNLAVLATLPAASYDLIYIDPPFNTGKIQSRTQLRTVRSEQGDRVGFGGHRYS CCCEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEECCCCCEEC SIKIGERAYGDSFDDFLAFIEPRLLEAYRLLKPQGSFFFHIDYREVHYCKVLIDQIFGRD EEEECCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCH SFINEIIWAYDYGARSRKKWSTKHDTILWYAKDPENYTFNYDQIDRIPYMAPGLVGPEKA HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEECHHHHCCCCCCCCCCCCCHHH ARGKTPTDVWWNTIVSPNGKEKTGYPTQKPLAILNRIVRVHSNPNDQLLDFFAGSGSFGE HCCCCCHHHHHHCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCH AAARNGRNFTLIDQNPQAIEVMRQRLAFAEPEFYEIPKDII HHHCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHCCCCCCC >Mature Secondary Structure MNKLYFGDNLAVLATLPAASYDLIYIDPPFNTGKIQSRTQLRTVRSEQGDRVGFGGHRYS CCCEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEECCCCCEEC SIKIGERAYGDSFDDFLAFIEPRLLEAYRLLKPQGSFFFHIDYREVHYCKVLIDQIFGRD EEEECCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCH SFINEIIWAYDYGARSRKKWSTKHDTILWYAKDPENYTFNYDQIDRIPYMAPGLVGPEKA HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEECHHHHCCCCCCCCCCCCCHHH ARGKTPTDVWWNTIVSPNGKEKTGYPTQKPLAILNRIVRVHSNPNDQLLDFFAGSGSFGE HCCCCCHHHHHHCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCH AAARNGRNFTLIDQNPQAIEVMRQRLAFAEPEFYEIPKDII HHHCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2690017; 2602165; 11024175 [H]