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The map label for this gene is yoaR [H]

Identifier: 159900572

GI number: 159900572

Start: 5182827

End: 5184755

Strand: Direct

Name: yoaR [H]

Synonym: Haur_4059

Alternate gene names: 159900572

Gene position: 5182827-5184755 (Clockwise)

Preceding gene: 159900571

Following gene: 159900573

Centisome position: 81.66

GC content: 51.53

Gene sequence:

>1929_bases
ATGATGAGTAGTATGGCCGCAGTTGCGCCGAACCCTCAAGCGCTGGCTTGGGCGAGGGCTGGTTTGTTGGCAATCAAATA
TGGGCGTTATCGTGATAGTGCTGCTTTATTGACTCGCGCAGTTAAGCTTGACCCAATGTTGGGCGAGGCTTGGCGCTGGT
TGGGCGCACTGCATAGCGGGCAACGTCAAGCCTATTGTTTGCGTTGGGCACAACGATCATTGCCGAGTGCCACCATTCCG
CGCTTGCCGAGCGTCGTCGCGGCACCTATAGCGCCAGTTCGCAGCAAAGCCAAACCGCAACGCCGAGGCAATTGGCGCAA
AGTTGCCCGTTGGTCGAGCGCCGCTGCCCTAGCCGCCTTGCTTGGTTTTGGTGGTTTTCAGGCGGCCTACGCCAATCGGG
TTTATCCTGGCATTCAGGCTTTTGGTCAATCGCTGAGTGGCTTGACCAGCAACGAAGCCGCCCAAGCGATTTTGCCAACC
TTGCAAGCTTGGAACAATCATCATTTTAAAGTGCAATTGGGCGATCAAACCGCGATTGTGCCATTTAATGCCTTGACGAG
CTTTGACCCTCAAGTGATTGCTGAGCGAGCGTTGCAAATTGGCCGCGAAGATTCGTGGTCGCAGCGCTTGAGCAACCAAA
GTTTAGGAATTGTCGGGACGATTAAGGCCGATGGCTTATTGCTCAATCAAGCCTCACTTGATCAGGCCATCCAAACCTTG
GCTGAAGCTAGCGATCGTTCTGCCGTCGATGCACAATTTCAGCACAATGCCAATGGTGCTTGGGCGGTCAGCAACGATGT
GATTGGCCTCAAACTTGATCGTGATCAAACCAAAGCGGCTTTCCAAGCCGCATGGGACAGCATTGATTGGGCAGCTGCGC
CGCATGATTATGAAGTGGTGGTCGTGCAACAGGCCTTACAACCGCAGCAAAAAGCCACTGAGCTTAATGCGCTGTTGCCA
ACCCTCAATCAGCAAACTGCTGCTCCGTTGATCATTACGATCAAGGGTAACGAGCATCAGTTTGATCGCACGAGCTTGCT
CGATTTACATAGATTACCGCAAGCAGGCCAACGTTTTGGCAATAATGATGCTGCAATCAAAGCAATTGTGCAGGAATTAG
CTCAAAACTATGATCAACCCGCCCAAGCCTCGCGGCTGGTGCGCAACGGCAATCGCGCGATTGAATGGCAATTTGGTCAA
ATTGGCTACACGCTTGATCAAGCGCAACTGCAAACTCAAATTGGCCAAGCCCTGAACACCGCCAATAATGCAGCCTTGGA
TTTCTCGTTGCATGAAACTGTGCCACCTGCTGGTGAGCTTGAAGCCTTGGGGATTTATCAAGTGATTGGGGTTGGCGCAT
CAGATTTTAGCTCCTACCCCGATTACAACCGTGATCGCAATGTTGACGTTGGTGGCAAGGAATTTGATGGTCTATTGATT
GCTCCTGGTGAAGTGGTATCGTTTGGTGGTACGGTTGGCGATATTTCGCTGGAAAAAGGCTACCAAATTGGCGAGATGAT
TGAAAATGGCGTGGCTGTGCCAAGCATTGGCGGTGGCATTTGCCAAGTTTCAACGACGCTATTTCGCGCGGTATTTTGGG
CGGGTTTGCCAATTGAGGAGCGCCACAACCATAGCTGGCGTTTGGCTTGGTACGAAGTTGATGCGCCCGCAGGCATGGAT
GCGACGATCGCCTTGGGCGGGCCAGATCTCAAATTTCGCAACGATACCAATGGCTATATTTTGATTGATGTTGAAACCGA
TCTGGTTAAGAAAAACCAAACTTTTACCTTATATGGCAGCGACACAGGCCGCACGGTGACGATGGAAGCAACCGGCAATG
GCTGGAATTTCTTCCAAATTTTTCGTACTATTACTGAGCGCGATGGCATAAGCCGCAGCGATCGTTGGGATAGCTATTAT
ACGCAGTAG

Upstream 100 bases:

>100_bases
CCATATCAGCGATTTATCAGCAGCCAACGAGCAAGGTTTGATTGACGCTAGAATCTGCCACGCCCTATGATAAGAGCATC
TAAACATAATGGGGGCAGTT

Downstream 100 bases:

>100_bases
GGAGGCTTTGTGGAGCCAAAAACACCAGAACCAATCATCAAAACAATCCCATCTTGGCGCGATTTAGCCCGTTGGACAAT
CACCGCATTTGCGATTTGGC

Product: VanW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MMSSMAAVAPNPQALAWARAGLLAIKYGRYRDSAALLTRAVKLDPMLGEAWRWLGALHSGQRQAYCLRWAQRSLPSATIP
RLPSVVAAPIAPVRSKAKPQRRGNWRKVARWSSAAALAALLGFGGFQAAYANRVYPGIQAFGQSLSGLTSNEAAQAILPT
LQAWNNHHFKVQLGDQTAIVPFNALTSFDPQVIAERALQIGREDSWSQRLSNQSLGIVGTIKADGLLLNQASLDQAIQTL
AEASDRSAVDAQFQHNANGAWAVSNDVIGLKLDRDQTKAAFQAAWDSIDWAAAPHDYEVVVVQQALQPQQKATELNALLP
TLNQQTAAPLIITIKGNEHQFDRTSLLDLHRLPQAGQRFGNNDAAIKAIVQELAQNYDQPAQASRLVRNGNRAIEWQFGQ
IGYTLDQAQLQTQIGQALNTANNAALDFSLHETVPPAGELEALGIYQVIGVGASDFSSYPDYNRDRNVDVGGKEFDGLLI
APGEVVSFGGTVGDISLEKGYQIGEMIENGVAVPSIGGGICQVSTTLFRAVFWAGLPIEERHNHSWRLAWYEVDAPAGMD
ATIALGGPDLKFRNDTNGYILIDVETDLVKKNQTFTLYGSDTGRTVTMEATGNGWNFFQIFRTITERDGISRSDRWDSYY
TQ

Sequences:

>Translated_642_residues
MMSSMAAVAPNPQALAWARAGLLAIKYGRYRDSAALLTRAVKLDPMLGEAWRWLGALHSGQRQAYCLRWAQRSLPSATIP
RLPSVVAAPIAPVRSKAKPQRRGNWRKVARWSSAAALAALLGFGGFQAAYANRVYPGIQAFGQSLSGLTSNEAAQAILPT
LQAWNNHHFKVQLGDQTAIVPFNALTSFDPQVIAERALQIGREDSWSQRLSNQSLGIVGTIKADGLLLNQASLDQAIQTL
AEASDRSAVDAQFQHNANGAWAVSNDVIGLKLDRDQTKAAFQAAWDSIDWAAAPHDYEVVVVQQALQPQQKATELNALLP
TLNQQTAAPLIITIKGNEHQFDRTSLLDLHRLPQAGQRFGNNDAAIKAIVQELAQNYDQPAQASRLVRNGNRAIEWQFGQ
IGYTLDQAQLQTQIGQALNTANNAALDFSLHETVPPAGELEALGIYQVIGVGASDFSSYPDYNRDRNVDVGGKEFDGLLI
APGEVVSFGGTVGDISLEKGYQIGEMIENGVAVPSIGGGICQVSTTLFRAVFWAGLPIEERHNHSWRLAWYEVDAPAGMD
ATIALGGPDLKFRNDTNGYILIDVETDLVKKNQTFTLYGSDTGRTVTMEATGNGWNFFQIFRTITERDGISRSDRWDSYY
TQ
>Mature_642_residues
MMSSMAAVAPNPQALAWARAGLLAIKYGRYRDSAALLTRAVKLDPMLGEAWRWLGALHSGQRQAYCLRWAQRSLPSATIP
RLPSVVAAPIAPVRSKAKPQRRGNWRKVARWSSAAALAALLGFGGFQAAYANRVYPGIQAFGQSLSGLTSNEAAQAILPT
LQAWNNHHFKVQLGDQTAIVPFNALTSFDPQVIAERALQIGREDSWSQRLSNQSLGIVGTIKADGLLLNQASLDQAIQTL
AEASDRSAVDAQFQHNANGAWAVSNDVIGLKLDRDQTKAAFQAAWDSIDWAAAPHDYEVVVVQQALQPQQKATELNALLP
TLNQQTAAPLIITIKGNEHQFDRTSLLDLHRLPQAGQRFGNNDAAIKAIVQELAQNYDQPAQASRLVRNGNRAIEWQFGQ
IGYTLDQAQLQTQIGQALNTANNAALDFSLHETVPPAGELEALGIYQVIGVGASDFSSYPDYNRDRNVDVGGKEFDGLLI
APGEVVSFGGTVGDISLEKGYQIGEMIENGVAVPSIGGGICQVSTTLFRAVFWAGLPIEERHNHSWRLAWYEVDAPAGMD
ATIALGGPDLKFRNDTNGYILIDVETDLVKKNQTFTLYGSDTGRTVTMEATGNGWNFFQIFRTITERDGISRSDRWDSYY
TQ

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 70014; Mature: 70014

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSSMAAVAPNPQALAWARAGLLAIKYGRYRDSAALLTRAVKLDPMLGEAWRWLGALHSG
CCCCCCCCCCCCHHHHHHHHCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC
QRQAYCLRWAQRSLPSATIPRLPSVVAAPIAPVRSKAKPQRRGNWRKVARWSSAAALAAL
CCHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHCCCCHHCCCHHHHHHHHHHHHHHHH
LGFGGFQAAYANRVYPGIQAFGQSLSGLTSNEAAQAILPTLQAWNNHHFKVQLGDQTAIV
HHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEE
PFNALTSFDPQVIAERALQIGREDSWSQRLSNQSLGIVGTIKADGLLLNQASLDQAIQTL
EEHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCEEECHHHHHHHHHHH
AEASDRSAVDAQFQHNANGAWAVSNDVIGLKLDRDQTKAAFQAAWDSIDWAAAPHDYEVV
HHCCCCCHHCHHHEECCCCEEEECCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCEEE
VVQQALQPQQKATELNALLPTLNQQTAAPLIITIKGNEHQFDRTSLLDLHRLPQAGQRFG
EEHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCHHHHHCC
NNDAAIKAIVQELAQNYDQPAQASRLVRNGNRAIEWQFGQIGYTLDQAQLQTQIGQALNT
CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC
ANNAALDFSLHETVPPAGELEALGIYQVIGVGASDFSSYPDYNRDRNVDVGGKEFDGLLI
CCCCEEEEEHHCCCCCCCCCCCCCHHHHEECCCHHHCCCCCCCCCCCCCCCCCCCCCEEE
APGEVVSFGGTVGDISLEKGYQIGEMIENGVAVPSIGGGICQVSTTLFRAVFWAGLPIEE
CCCCEEECCCCEECEEHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH
RHNHSWRLAWYEVDAPAGMDATIALGGPDLKFRNDTNGYILIDVETDLVKKNQTFTLYGS
CCCCCEEEEEEEECCCCCCCEEEEECCCCCEEECCCCCEEEEEECHHHHCCCCEEEEEEC
DTGRTVTMEATGNGWNFFQIFRTITERDGISRSDRWDSYYTQ
CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMSSMAAVAPNPQALAWARAGLLAIKYGRYRDSAALLTRAVKLDPMLGEAWRWLGALHSG
CCCCCCCCCCCCHHHHHHHHCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC
QRQAYCLRWAQRSLPSATIPRLPSVVAAPIAPVRSKAKPQRRGNWRKVARWSSAAALAAL
CCHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHCCCCHHCCCHHHHHHHHHHHHHHHH
LGFGGFQAAYANRVYPGIQAFGQSLSGLTSNEAAQAILPTLQAWNNHHFKVQLGDQTAIV
HHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEE
PFNALTSFDPQVIAERALQIGREDSWSQRLSNQSLGIVGTIKADGLLLNQASLDQAIQTL
EEHHHCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCEEECHHHHHHHHHHH
AEASDRSAVDAQFQHNANGAWAVSNDVIGLKLDRDQTKAAFQAAWDSIDWAAAPHDYEVV
HHCCCCCHHCHHHEECCCCEEEECCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCEEE
VVQQALQPQQKATELNALLPTLNQQTAAPLIITIKGNEHQFDRTSLLDLHRLPQAGQRFG
EEHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCHHHHHCC
NNDAAIKAIVQELAQNYDQPAQASRLVRNGNRAIEWQFGQIGYTLDQAQLQTQIGQALNT
CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC
ANNAALDFSLHETVPPAGELEALGIYQVIGVGASDFSSYPDYNRDRNVDVGGKEFDGLLI
CCCCEEEEEHHCCCCCCCCCCCCCHHHHEECCCHHHCCCCCCCCCCCCCCCCCCCCCEEE
APGEVVSFGGTVGDISLEKGYQIGEMIENGVAVPSIGGGICQVSTTLFRAVFWAGLPIEE
CCCCEEECCCCEECEEHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH
RHNHSWRLAWYEVDAPAGMDATIALGGPDLKFRNDTNGYILIDVETDLVKKNQTFTLYGS
CCCCCEEEEEEEECCCCCCCEEEEECCCCCEEECCCCCEEEEEECHHHHCCCCEEEEEEC
DTGRTVTMEATGNGWNFFQIFRTITERDGISRSDRWDSYYTQ
CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]