| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900568
Identifier: 159900568
GI number: 159900568
Start: 5174863
End: 5175621
Strand: Reverse
Name: 159900568
Synonym: Haur_4055
Alternate gene names: NA
Gene position: 5175621-5174863 (Counterclockwise)
Preceding gene: 159900570
Following gene: 159900567
Centisome position: 81.55
GC content: 43.08
Gene sequence:
>759_bases ATGTCAATACCAACAGTATTTATCGCCGATGATGATGAGATTTTCTTGGCTGGAACGATTGATCTATTTCAACGAATGGG ATATGCGATAGATTCAGCCCGCTCGGTGAATGAGGCGCTTGCCAAACTTGATACTCATCAAAATGATTGGAGTTTAGCCG TAGTTGATTTACTGATGCCAATGGAATATCGCGAGCAGGTATATCGCGACCAAGTGCGTTATGAAAATGATGCCGCCAAC GGCCTCAAGGTTATTCAGCAGATCAAGCAAAAAATGCCATGGCTCGGCATTATCGTCGTTACCTCATATCGCTGGCTCTT TGAGCACATCGTTGAATTGTGGGCACAAGGCTTTGGACGAATTGTTGGAGTTGAAAAAGGCGCATCAATTGCGATTTACC GTGAAGCCCTCGAAACCCTGCGGATTGGTGAGAGTCGTTTATTTTGCAAAGATCGTCAAATTCCCTTGGTTGGGGCCACC AAAATTTTCTTATCAATGATCGATACGAGCCTGATCGAGCAAGTTAAAGCGATTGCTCCTCAACTGCCAACTATGCCAAA TCATCTTCAACGGATTGTGCCTCTGATTGCTTGGAAGCCAAAATTTATTGCTGAAGCCTTATCACTTTCAATCCATGCCG TTCAAACTTATAAAGATGATATTTACGAATATTTAGATTTACGCAAACGCGAAGAACACCGTGATACCCTGATTTTCCTA GCCTCGATTTATGCCTATTTATCCGAGAATGATCGATGA
Upstream 100 bases:
>100_bases AATTTGTTGGGTATTATTCTGAAATGAGAAACCAAAAGAGCAGAATATGCCTGCTATAATAGCCGATTAAGCAACCCTAA TTGGCTTAAATGAGGTACGT
Downstream 100 bases:
>100_bases AATACATAATGCGTGTAATTAGCATCTTTTTTGGATGTTTTGTTGTCATCTCAATGGCAATTTCCGTTCGAACTAGCTTA AACACGATTGATGATCCAGC
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSIPTVFIADDDEIFLAGTIDLFQRMGYAIDSARSVNEALAKLDTHQNDWSLAVVDLLMPMEYREQVYRDQVRYENDAAN GLKVIQQIKQKMPWLGIIVVTSYRWLFEHIVELWAQGFGRIVGVEKGASIAIYREALETLRIGESRLFCKDRQIPLVGAT KIFLSMIDTSLIEQVKAIAPQLPTMPNHLQRIVPLIAWKPKFIAEALSLSIHAVQTYKDDIYEYLDLRKREEHRDTLIFL ASIYAYLSENDR
Sequences:
>Translated_252_residues MSIPTVFIADDDEIFLAGTIDLFQRMGYAIDSARSVNEALAKLDTHQNDWSLAVVDLLMPMEYREQVYRDQVRYENDAAN GLKVIQQIKQKMPWLGIIVVTSYRWLFEHIVELWAQGFGRIVGVEKGASIAIYREALETLRIGESRLFCKDRQIPLVGAT KIFLSMIDTSLIEQVKAIAPQLPTMPNHLQRIVPLIAWKPKFIAEALSLSIHAVQTYKDDIYEYLDLRKREEHRDTLIFL ASIYAYLSENDR >Mature_251_residues SIPTVFIADDDEIFLAGTIDLFQRMGYAIDSARSVNEALAKLDTHQNDWSLAVVDLLMPMEYREQVYRDQVRYENDAANG LKVIQQIKQKMPWLGIIVVTSYRWLFEHIVELWAQGFGRIVGVEKGASIAIYREALETLRIGESRLFCKDRQIPLVGATK IFLSMIDTSLIEQVKAIAPQLPTMPNHLQRIVPLIAWKPKFIAEALSLSIHAVQTYKDDIYEYLDLRKREEHRDTLIFLA SIYAYLSENDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29050; Mature: 28919
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPTVFIADDDEIFLAGTIDLFQRMGYAIDSARSVNEALAKLDTHQNDWSLAVVDLLMP CCCCEEEEECCCCEEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC MEYREQVYRDQVRYENDAANGLKVIQQIKQKMPWLGIIVVTSYRWLFEHIVELWAQGFGR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHH IVGVEKGASIAIYREALETLRIGESRLFCKDRQIPLVGATKIFLSMIDTSLIEQVKAIAP EEEECCCCCHHHHHHHHHHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC QLPTMPNHLQRIVPLIAWKPKFIAEALSLSIHAVQTYKDDIYEYLDLRKREEHRDTLIFL CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASIYAYLSENDR HHHHHHHHCCCC >Mature Secondary Structure SIPTVFIADDDEIFLAGTIDLFQRMGYAIDSARSVNEALAKLDTHQNDWSLAVVDLLMP CCCEEEEECCCCEEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC MEYREQVYRDQVRYENDAANGLKVIQQIKQKMPWLGIIVVTSYRWLFEHIVELWAQGFGR HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHH IVGVEKGASIAIYREALETLRIGESRLFCKDRQIPLVGATKIFLSMIDTSLIEQVKAIAP EEEECCCCCHHHHHHHHHHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC QLPTMPNHLQRIVPLIAWKPKFIAEALSLSIHAVQTYKDDIYEYLDLRKREEHRDTLIFL CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASIYAYLSENDR HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA