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The map label for this gene is phoD [H]

Identifier: 159900570

GI number: 159900570

Start: 5179654

End: 5181411

Strand: Reverse

Name: phoD [H]

Synonym: Haur_4057

Alternate gene names: 159900570

Gene position: 5181411-5179654 (Counterclockwise)

Preceding gene: 159900578

Following gene: 159900568

Centisome position: 81.64

GC content: 50.74

Gene sequence:

>1758_bases
ATGCGCCGCTTATTTGGGCTATGTTGTTTATGTTGCTTGCTAGCTGGAAGTTGGTCAGGCAGTTCAAGCGTTGGCCGGAC
AAATCTGCTCTTTCCGCCCGCCGATTTGCCGCAAGGCGTGGCTGTGGGCGATGTAACTGCTACCAGCGCGGTGCTTTGGG
CACGTTCCGCCAGCCTTGGCTCGGTTAGCTTTGAATATAGTCTCAACGCCAATTTTAATCCAGTGGCTGGCTCGGCCACA
GTTAGCATCACCGACACGATGCAACCAGCCAAAACCAGCATCAGCAATTTACAACCGGCTACTAGTTATTTTTATCGTGC
TACAACGCTCAGCAATACTTCATTTGCTGGTAGATTTCGCACCGCCCCAACCAGTGGAACCTATAGCAATTTACGCTTTG
GCGCAAGCGGCGATCAACAAGGGGCACTCGCGCCGTTTCCAGCTTTAGCCAACGCCGATCAGCGCGATCTTGATCTGTTT
ATTCATCTTGGCGATTCAATTTATGCTGATATTGGCTCGCCTGTGTTGGGCACAACCGCCAAAACTTTAGCCGAATTTCG
CTTGAAACAGACCGAAAGTTATAGCACGCGGCTGAATTTGAACACGCTGGCCGATTTACGCGCGACCACCGCATGGCTAG
CGACAACTGATGATCATGAAGTTGCCAACGATCACGCTGGTGGGGCAGCACCGAGCAGTGATCCACGTTTTTTGCCGACC
AATGCCAGCTACATCAATGATACTGATTATTTTGAAGCGGGCTATCAAGCTTTCGTCGAATATAACCCAGTTAATGCGCT
GTTTTATGGCGCGACTGGCGATCTGCGGACTGCCAACGAGCGTAAACTTTACCGCTACCAACCATATGGTAATACGGCAG
CCTTTTTTGTGCTCGATGGCCGTTCATTTCGCGACCAAAAATTACCAGCACCCAACAACACGCCCTCAGAAATTGTGGCC
TTTTTGACTGCCGTATTTAGCCCAACCCGCACCTTGCTTGGTCAAGCTCAACTCAGCCAACTCGAAAACGATTTGCTCGC
CGCTGATCAAGCCAATATCACCTGGAAATTTGTGATTGTGCCTGAGCCAATTCAAAACCTTGGCACAGCAGCGGCCAACG
ATCGCTTTGAGGGCTATGCCGCCGAACGCAGCCGCATTTTGAGCTTTATCAACGATCATGCAATTGAAAATGTGGTGTTT
ATCGCCGCCGATATTCATGGTACGGTTGTCAATAATTTAAGCTACCAAACCGCCGCAGGCCAGCCGCAAATCCCCACCAA
TGCCTGGGAAATTTCGGTTGGTTCGGTCGCCACGACCTCGCCATTTGGCATGCGAGTAGCAGCAGGAGCCTTATCAACCG
GAATTATTAGCTCAACCACTTACAATAATTATTTACAACTACCCAACGATCAACAAGACGCGGCGGCGGAAGGTTGGCTC
AACACCGTATTAAATGTATTCGGCTACACGCCCGTGGGCTTGCAGGATGCGCCGTTCGCTGAACGCACCACGCTCTTGCA
AGGGCGCTATTTTGCTGGCCACTACTTTGGCTGGACTGAATTTGAAATTAGCCAGCCTGACCAAACCTTGCGCGTTTCGA
CCTATGGTATCGATACTTATGGAACCAGCGAACTGGCCAACAATCCAGGCGAGGTGGTGAGCCGTATGCCAGTGATTGTG
CAGCAATTCGAGGTTGATCCCATCGTCAGCATCTCGCCAACGCTGATACTCAATTATTTGCCAGCAGTAACGAAGTAA

Upstream 100 bases:

>100_bases
AAGATGTTGTTGCTGCATCCTACCATTATTTAATCAATTTGTGGATTGACAACGCCGCTAGACTAGGGGGGATTTTTCCA
CTATCAACAAGGAGCTAACT

Downstream 100 bases:

>100_bases
CGAGATAACAGGGATGAGGGCAACGAAACCGCGAAGGACACGAAGAACACAAAGTTCTGGTTGATTGGTAGGCTGAAATA
TCTGCAATATTCAGGATTCC

Product: phosphodiesterase/alkaline phosphatase D-like protein

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MRRLFGLCCLCCLLAGSWSGSSSVGRTNLLFPPADLPQGVAVGDVTATSAVLWARSASLGSVSFEYSLNANFNPVAGSAT
VSITDTMQPAKTSISNLQPATSYFYRATTLSNTSFAGRFRTAPTSGTYSNLRFGASGDQQGALAPFPALANADQRDLDLF
IHLGDSIYADIGSPVLGTTAKTLAEFRLKQTESYSTRLNLNTLADLRATTAWLATTDDHEVANDHAGGAAPSSDPRFLPT
NASYINDTDYFEAGYQAFVEYNPVNALFYGATGDLRTANERKLYRYQPYGNTAAFFVLDGRSFRDQKLPAPNNTPSEIVA
FLTAVFSPTRTLLGQAQLSQLENDLLAADQANITWKFVIVPEPIQNLGTAAANDRFEGYAAERSRILSFINDHAIENVVF
IAADIHGTVVNNLSYQTAAGQPQIPTNAWEISVGSVATTSPFGMRVAAGALSTGIISSTTYNNYLQLPNDQQDAAAEGWL
NTVLNVFGYTPVGLQDAPFAERTTLLQGRYFAGHYFGWTEFEISQPDQTLRVSTYGIDTYGTSELANNPGEVVSRMPVIV
QQFEVDPIVSISPTLILNYLPAVTK

Sequences:

>Translated_585_residues
MRRLFGLCCLCCLLAGSWSGSSSVGRTNLLFPPADLPQGVAVGDVTATSAVLWARSASLGSVSFEYSLNANFNPVAGSAT
VSITDTMQPAKTSISNLQPATSYFYRATTLSNTSFAGRFRTAPTSGTYSNLRFGASGDQQGALAPFPALANADQRDLDLF
IHLGDSIYADIGSPVLGTTAKTLAEFRLKQTESYSTRLNLNTLADLRATTAWLATTDDHEVANDHAGGAAPSSDPRFLPT
NASYINDTDYFEAGYQAFVEYNPVNALFYGATGDLRTANERKLYRYQPYGNTAAFFVLDGRSFRDQKLPAPNNTPSEIVA
FLTAVFSPTRTLLGQAQLSQLENDLLAADQANITWKFVIVPEPIQNLGTAAANDRFEGYAAERSRILSFINDHAIENVVF
IAADIHGTVVNNLSYQTAAGQPQIPTNAWEISVGSVATTSPFGMRVAAGALSTGIISSTTYNNYLQLPNDQQDAAAEGWL
NTVLNVFGYTPVGLQDAPFAERTTLLQGRYFAGHYFGWTEFEISQPDQTLRVSTYGIDTYGTSELANNPGEVVSRMPVIV
QQFEVDPIVSISPTLILNYLPAVTK
>Mature_585_residues
MRRLFGLCCLCCLLAGSWSGSSSVGRTNLLFPPADLPQGVAVGDVTATSAVLWARSASLGSVSFEYSLNANFNPVAGSAT
VSITDTMQPAKTSISNLQPATSYFYRATTLSNTSFAGRFRTAPTSGTYSNLRFGASGDQQGALAPFPALANADQRDLDLF
IHLGDSIYADIGSPVLGTTAKTLAEFRLKQTESYSTRLNLNTLADLRATTAWLATTDDHEVANDHAGGAAPSSDPRFLPT
NASYINDTDYFEAGYQAFVEYNPVNALFYGATGDLRTANERKLYRYQPYGNTAAFFVLDGRSFRDQKLPAPNNTPSEIVA
FLTAVFSPTRTLLGQAQLSQLENDLLAADQANITWKFVIVPEPIQNLGTAAANDRFEGYAAERSRILSFINDHAIENVVF
IAADIHGTVVNNLSYQTAAGQPQIPTNAWEISVGSVATTSPFGMRVAAGALSTGIISSTTYNNYLQLPNDQQDAAAEGWL
NTVLNVFGYTPVGLQDAPFAERTTLLQGRYFAGHYFGWTEFEISQPDQTLRVSTYGIDTYGTSELANNPGEVVSRMPVIV
QQFEVDPIVSISPTLILNYLPAVTK

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 63114; Mature: 63114

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLFGLCCLCCLLAGSWSGSSSVGRTNLLFPPADLPQGVAVGDVTATSAVLWARSASLG
CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEECCCHHHHHEEEECCCCCC
SVSFEYSLNANFNPVAGSATVSITDTMQPAKTSISNLQPATSYFYRATTLSNTSFAGRFR
CEEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHCCCCHHHHEEEEEEECCCCCCCEEE
TAPTSGTYSNLRFGASGDQQGALAPFPALANADQRDLDLFIHLGDSIYADIGSPVLGTTA
CCCCCCCCCCEEECCCCCCCCCCCCCCHHCCCCCCCEEEEEEECCHHHHHCCCCCCCHHH
KTLAEFRLKQTESYSTRLNLNTLADLRATTAWLATTDDHEVANDHAGGAAPSSDPRFLPT
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHEEEEEECCCCHHCCCCCCCCCCCCCCCEECC
NASYINDTDYFEAGYQAFVEYNPVNALFYGATGDLRTANERKLYRYQPYGNTAAFFVLDG
CCCCCCCCHHHHHCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEECCCCCCEEEEEECC
RSFRDQKLPAPNNTPSEIVAFLTAVFSPTRTLLGQAQLSQLENDLLAADQANITWKFVIV
CCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
PEPIQNLGTAAANDRFEGYAAERSRILSFINDHAIENVVFIAADIHGTVVNNLSYQTAAG
CCCHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEEECCCEEECCCEEEECCC
QPQIPTNAWEISVGSVATTSPFGMRVAAGALSTGIISSTTYNNYLQLPNDQQDAAAEGWL
CCCCCCCCEEEEECCEEECCCCCCCHHHHHHHCCCEECCCCCCEEECCCCCHHHHHHHHH
NTVLNVFGYTPVGLQDAPFAERTTLLQGRYFAGHYFGWTEFEISQPDQTLRVSTYGIDTY
HHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEEECCEEEEEECCCCCEEEEEEECCCCC
GTSELANNPGEVVSRMPVIVQQFEVDPIVSISPTLILNYLPAVTK
CCHHHHCCHHHHHHHCCHHHHHHCCCCCEECCHHHHHHHHHCCCC
>Mature Secondary Structure
MRRLFGLCCLCCLLAGSWSGSSSVGRTNLLFPPADLPQGVAVGDVTATSAVLWARSASLG
CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCEECCCHHHHHEEEECCCCCC
SVSFEYSLNANFNPVAGSATVSITDTMQPAKTSISNLQPATSYFYRATTLSNTSFAGRFR
CEEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHCCCCHHHHEEEEEEECCCCCCCEEE
TAPTSGTYSNLRFGASGDQQGALAPFPALANADQRDLDLFIHLGDSIYADIGSPVLGTTA
CCCCCCCCCCEEECCCCCCCCCCCCCCHHCCCCCCCEEEEEEECCHHHHHCCCCCCCHHH
KTLAEFRLKQTESYSTRLNLNTLADLRATTAWLATTDDHEVANDHAGGAAPSSDPRFLPT
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHEEEEEECCCCHHCCCCCCCCCCCCCCCEECC
NASYINDTDYFEAGYQAFVEYNPVNALFYGATGDLRTANERKLYRYQPYGNTAAFFVLDG
CCCCCCCCHHHHHCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEECCCCCCEEEEEECC
RSFRDQKLPAPNNTPSEIVAFLTAVFSPTRTLLGQAQLSQLENDLLAADQANITWKFVIV
CCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
PEPIQNLGTAAANDRFEGYAAERSRILSFINDHAIENVVFIAADIHGTVVNNLSYQTAAG
CCCHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEEECCCEEECCCEEEECCC
QPQIPTNAWEISVGSVATTSPFGMRVAAGALSTGIISSTTYNNYLQLPNDQQDAAAEGWL
CCCCCCCCEEEEECCEEECCCCCCCHHHHHHHCCCEECCCCCCEEECCCCCHHHHHHHHH
NTVLNVFGYTPVGLQDAPFAERTTLLQGRYFAGHYFGWTEFEISQPDQTLRVSTYGIDTY
HHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEEECCEEEEEECCCCCEEEEEEECCCCC
GTSELANNPGEVVSRMPVIVQQFEVDPIVSISPTLILNYLPAVTK
CCHHHHCCHHHHHHHCCHHHHHHCCCCCEECCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]