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The map label for this gene is msmE [H]

Identifier: 159900546

GI number: 159900546

Start: 5148672

End: 5149961

Strand: Direct

Name: msmE [H]

Synonym: Haur_4033

Alternate gene names: 159900546

Gene position: 5148672-5149961 (Clockwise)

Preceding gene: 159900539

Following gene: 159900547

Centisome position: 81.13

GC content: 50.08

Gene sequence:

>1290_bases
ATGGTTCGCAAATGGCGTTGGAAATTCGCTTTGGTTAGCCTATTAACGACCGTTTTAGCCGCGTGTGGTGGCGGCAGCGC
AACCCAAGCTCCTACCACCAATCCCAATCGGGTCACGCTGACGATTGAAAGCTGGCGCAGCGACGACCAAAAGGTCTGGA
CTGAGCAGATTATCCCGCTATTTGAAAAGAGCCATCCTGATATTCATGTGGAGTTTCGGCCCACCGCGCCGACCGAATAC
AACGCAGCGCTCAATAGCAAACTAGAGGCTGGCACTGCTGGCGATCTGATCACCTGCCGGCCTTTTGATGTTTCATTAGG
CTTGTATACTGCGGGGCATTTGACTGCACTCGACGATTTGCCAGGCATTGCCCATTTTAGCGATGTAGCCAAGAGCGCTT
GGCAAACCGACGATGGCAAGACGCTCTTTTGCTTGCCAATGGCCTCGGTGATCCATGGCTTTATCTACAACAAAGCGATT
TTTAACGAGCTAGGTTTGACTGAACCCAAAACTGTCGATGAGTTTTTCGCGGTGCTCGATAAAATTAAGCAAGATGGCCG
CTATACACCATTGGTGATGGGTACTGCCGAGCAGTGGGAAGCAGCAACCATGGGCTTCCAAAACATCGGGCCAAATTATT
GGTTTGGTGAAAATGGCCGTAAAGCGCTAATCGATGGCAGCGCCAAATTATCCGATGCGGCCTATGTTTCGACCTTAAAA
GATTTGGCACGCTGGGGCGATTATTTGCCCGATGGCTTTGAAGCAGTCAAATATGCCGATGCTCAGATGTTGTTTGCCTC
AGGCAAAGGGGCAATTTACCCCGCTGGCTCGTGGGATATTAGCTATTTCAACCAAAATGCCAAATTCGAGCTTGGCGCAT
TCAAAGCTCCGGTTGCCAAAGCCAATGATCAATGCTTCATCAGCGACCATACCGATATTGGAATTGGGATTAATGCTAAG
ACTGCCCACATGGCTCAAGCCCGTACCTTCCTTGAGTGGATGACTGGGCCAGAATTTGCTGGCGAATTCAGCAATGCCTT
GCCTGGCTTCTTCAGCCTCTCGGATTATCCAGTGAGCTTGAAAAATCCCTTGGCCCAAACCTTTGTTGATTGGCGCAAAC
AGTGTCAATCGACAATCCGCAATTCCTACCAAATTCTCTCACGCGGCGAGCCAAACCTCGAAAACGAACTCTGGCGGATC
AGCGTTGGGGTGATTGATGGAACATTTGCGCCTGAAGATGCGGCCCAAGATCTGCAAAAGGGCTTAGATAATTGGTACAA
AAAGCCCTAG

Upstream 100 bases:

>100_bases
AATGAAATAATAAAGTTTATTCAGTCCTCAATCGCATTGCTGCCCGCATCATCAACAAACAAGTTTCAATAATCCGCAAC
GTCCTAGACAGGAGTACGTT

Downstream 100 bases:

>100_bases
TTTGCCCAAAGTAAGGCTACCTCGCTGAATTATTGGCGAGGTAGCTGGTTTGTTGAAAGAGTTTGCCTATGTTGCGCCCC
AACAAATCGCGCCCACGCTG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MVRKWRWKFALVSLLTTVLAACGGGSATQAPTTNPNRVTLTIESWRSDDQKVWTEQIIPLFEKSHPDIHVEFRPTAPTEY
NAALNSKLEAGTAGDLITCRPFDVSLGLYTAGHLTALDDLPGIAHFSDVAKSAWQTDDGKTLFCLPMASVIHGFIYNKAI
FNELGLTEPKTVDEFFAVLDKIKQDGRYTPLVMGTAEQWEAATMGFQNIGPNYWFGENGRKALIDGSAKLSDAAYVSTLK
DLARWGDYLPDGFEAVKYADAQMLFASGKGAIYPAGSWDISYFNQNAKFELGAFKAPVAKANDQCFISDHTDIGIGINAK
TAHMAQARTFLEWMTGPEFAGEFSNALPGFFSLSDYPVSLKNPLAQTFVDWRKQCQSTIRNSYQILSRGEPNLENELWRI
SVGVIDGTFAPEDAAQDLQKGLDNWYKKP

Sequences:

>Translated_429_residues
MVRKWRWKFALVSLLTTVLAACGGGSATQAPTTNPNRVTLTIESWRSDDQKVWTEQIIPLFEKSHPDIHVEFRPTAPTEY
NAALNSKLEAGTAGDLITCRPFDVSLGLYTAGHLTALDDLPGIAHFSDVAKSAWQTDDGKTLFCLPMASVIHGFIYNKAI
FNELGLTEPKTVDEFFAVLDKIKQDGRYTPLVMGTAEQWEAATMGFQNIGPNYWFGENGRKALIDGSAKLSDAAYVSTLK
DLARWGDYLPDGFEAVKYADAQMLFASGKGAIYPAGSWDISYFNQNAKFELGAFKAPVAKANDQCFISDHTDIGIGINAK
TAHMAQARTFLEWMTGPEFAGEFSNALPGFFSLSDYPVSLKNPLAQTFVDWRKQCQSTIRNSYQILSRGEPNLENELWRI
SVGVIDGTFAPEDAAQDLQKGLDNWYKKP
>Mature_429_residues
MVRKWRWKFALVSLLTTVLAACGGGSATQAPTTNPNRVTLTIESWRSDDQKVWTEQIIPLFEKSHPDIHVEFRPTAPTEY
NAALNSKLEAGTAGDLITCRPFDVSLGLYTAGHLTALDDLPGIAHFSDVAKSAWQTDDGKTLFCLPMASVIHGFIYNKAI
FNELGLTEPKTVDEFFAVLDKIKQDGRYTPLVMGTAEQWEAATMGFQNIGPNYWFGENGRKALIDGSAKLSDAAYVSTLK
DLARWGDYLPDGFEAVKYADAQMLFASGKGAIYPAGSWDISYFNQNAKFELGAFKAPVAKANDQCFISDHTDIGIGINAK
TAHMAQARTFLEWMTGPEFAGEFSNALPGFFSLSDYPVSLKNPLAQTFVDWRKQCQSTIRNSYQILSRGEPNLENELWRI
SVGVIDGTFAPEDAAQDLQKGLDNWYKKP

Specific function: Involved in a binding protein-dependent transport system responsible for the uptake of melibiose, raffinose and isomaltotriose [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47449; Mature: 47449

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRKWRWKFALVSLLTTVLAACGGGSATQAPTTNPNRVTLTIESWRSDDQKVWTEQIIPL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
FEKSHPDIHVEFRPTAPTEYNAALNSKLEAGTAGDLITCRPFDVSLGLYTAGHLTALDDL
HHCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEEEECCCEEEEEEEECCCEEEHHCC
PGIAHFSDVAKSAWQTDDGKTLFCLPMASVIHGFIYNKAIFNELGLTEPKTVDEFFAVLD
CCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KIKQDGRYTPLVMGTAEQWEAATMGFQNIGPNYWFGENGRKALIDGSAKLSDAAYVSTLK
HHHHCCCCCCEEECCHHHHHHHHCCHHHCCCCCEECCCCCEEEECCCCCCCHHHHHHHHH
DLARWGDYLPDGFEAVKYADAQMLFASGKGAIYPAGSWDISYFNQNAKFELGAFKAPVAK
HHHHHHCCCCCHHHHHHHHCCEEEEECCCCCEECCCCCEEEEECCCCCEEECCCCCCCCC
ANDQCFISDHTDIGIGINAKTAHMAQARTFLEWMTGPEFAGEFSNALPGFFSLSDYPVSL
CCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCCCCHH
KNPLAQTFVDWRKQCQSTIRNSYQILSRGEPNLENELWRISVGVIDGTFAPEDAAQDLQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHH
GLDNWYKKP
HHHHHCCCC
>Mature Secondary Structure
MVRKWRWKFALVSLLTTVLAACGGGSATQAPTTNPNRVTLTIESWRSDDQKVWTEQIIPL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
FEKSHPDIHVEFRPTAPTEYNAALNSKLEAGTAGDLITCRPFDVSLGLYTAGHLTALDDL
HHCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCEEEECCCEEEEEEEECCCEEEHHCC
PGIAHFSDVAKSAWQTDDGKTLFCLPMASVIHGFIYNKAIFNELGLTEPKTVDEFFAVLD
CCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KIKQDGRYTPLVMGTAEQWEAATMGFQNIGPNYWFGENGRKALIDGSAKLSDAAYVSTLK
HHHHCCCCCCEEECCHHHHHHHHCCHHHCCCCCEECCCCCEEEECCCCCCCHHHHHHHHH
DLARWGDYLPDGFEAVKYADAQMLFASGKGAIYPAGSWDISYFNQNAKFELGAFKAPVAK
HHHHHHCCCCCHHHHHHHHCCEEEEECCCCCEECCCCCEEEEECCCCCEEECCCCCCCCC
ANDQCFISDHTDIGIGINAKTAHMAQARTFLEWMTGPEFAGEFSNALPGFFSLSDYPVSL
CCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCCCCHH
KNPLAQTFVDWRKQCQSTIRNSYQILSRGEPNLENELWRISVGVIDGTFAPEDAAQDLQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHH
GLDNWYKKP
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1537846; 12397186 [H]