| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900538
Identifier: 159900538
GI number: 159900538
Start: 5137458
End: 5139317
Strand: Direct
Name: 159900538
Synonym: Haur_4025
Alternate gene names: NA
Gene position: 5137458-5139317 (Clockwise)
Preceding gene: 159900537
Following gene: 159900539
Centisome position: 80.95
GC content: 47.47
Gene sequence:
>1860_bases ATGAACAAAAAAACATTAACGAGTTTGTTTGCCGAGTCAATCTACCAAATTCCAGATTATCAGCGTGGTTATGCTTGGGA AGAAAAACAGTGGAAAGATTTTATACAAGATATTGATGCCCTGGTCGATGAGCAGGTGACCAGTCATTATACTGGAACCG TTGTAGTTTACGAAGGCCGCGACGCTGAAAAGCGACCATATGGCCGAAAGAAGCTAAAAGTGCTTGATGTGGTTGATGGA CAGCAGCGATTAACCACCACTTGCCTCTATCTTTCAGTAATTATTCGCGCACTGATTCAGCATGGAGAGTCGGACTATGA GCGCGATATTGATGATTTTCTGTATGCAGGCGCAACCTGCAAGCTGAACCTCAATAATGAAACTGGCGACATCTTTTATG ATCTTTTAAAGACAGGCTATGTCAATACCCCGCTTCAGTCGCCACATCAGCATCGGCTCGTCGAGGCCCACCGTCGCTTT CAACACCACATTAGCGAGCAGTTGCAGCAACGAGGTGGCGCTGGGGTCGCTTATCTCAAAGAATTGCATTATGCGATTAC CCAAAAACTCAATTTTACCTTCTATGTGATCGAATCAGAAGCCGAAATTGGCATGACCTTCGAGTTGATGAACTCGCGGG GCAAGGATCTTTCGGTGCTTGAACTGCTCAAAAATTATTTAATGCACTGGGTTTCGCGCAACGAAAACAACCTTGCAGAT CGTGAAACCCTCACCAAACTGATCAATCGCAGTTGGAAAGACACCTACACCAACCTTGGCGCAAGTTCGGGCAACAATGA AGATCAATGTCTACGCATCGCTTGGACGCTCTATTGCAGCCATTCCCCAGCCAATTGGCATGGGTATGAAGGCTTCAAAG CTGATGAATACATCCCGCTGAGAACATTTAGTAAACGCACGAAGGCCGAGACAAAAATATTTATCGAGCACTTTGTGATG GGCCTTGCTGAAGTTTCACATCATTATGCCAGCATTATCAATCCAACCACCACCACAGCGCTATTCGAAGCTGAGCGGAT TTGGCTCAGCAAGATTCGGCATACCGGCAACATTGCCAATTTCTTGCCCTTGATGGTGGCAGCCCGCAAGCAATACCAAG CAGGGCAGATTAGCGAAGGCGCATACATCGACATGCTCAAGGCACTCGAATGCTATGCCTATCGTGTATTTCTTTGGGCA GCCCGCCGCAGCAATGCTGGTAAATCAAGCTTCTATCGTTGGGGATACGAGATCTTTACTCAGCCGCAACTGATCAGTGA TATTACGCGCGGGATTCATCAACTGACCCGCTACTATGCACCTGAAGATGATTTTATCAACGGCAATGCCAACCCCAGCG ATTGGTATAGAACTCGGAATCGCTTGAGGTACACCCTGTTTGAGTATGAGTTACATCTGCTTGCGACCGAGGGGAAAAAT AGCGAACCACGACTTGGCTGGGATCAGCTCAGCGATTCGACGATTGAGCATATTCTGCCGCAGAATCCAGCAAAACATTC GCATTGGAATGGCGTATGGAACAAAACCGCGTTCAATGCAAGTGTCCACGATATCGCCAATCTTGTGCTTACCCACAATA ATGCCAGCTATAGCAACTTTGAGTTTGCCCGCAAAAAGGGCCAACCAGGCCTAAGTCCTAGTTATAGCGATTCTGATATT CGCCAAGAACGTAAACTCGCGGCCTTTGCCGATTGGACTCCCAAAGAGTTTGCTGAACGCCGAAACGAGTTGATCATATG GATCAATCAGCGCTGGAAAACCGTCGGCGAACCCGACAATGCAACGTTGGAAGTCAACGACGAGGCTGATGACGATGGCA TCGAGCATCAAGAAGGATAA
Upstream 100 bases:
>100_bases TAATCAATAATAGTACTTATTTGCTCAAAATAGTTTCAATTATCGCAACATTCGATATGCTAAAATCAAATATCGGTGCT GATTGAAAGACAAGGGTGCT
Downstream 100 bases:
>100_bases ATTAGTCTGCAAACCGCCAAGCCTGAAACTTGGCGGTTTATCTATCCAATTCAAAATTATTTTTTTGCGAACGCTTGTAG GTCTGAACAATTCTAACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MNKKTLTSLFAESIYQIPDYQRGYAWEEKQWKDFIQDIDALVDEQVTSHYTGTVVVYEGRDAEKRPYGRKKLKVLDVVDG QQRLTTTCLYLSVIIRALIQHGESDYERDIDDFLYAGATCKLNLNNETGDIFYDLLKTGYVNTPLQSPHQHRLVEAHRRF QHHISEQLQQRGGAGVAYLKELHYAITQKLNFTFYVIESEAEIGMTFELMNSRGKDLSVLELLKNYLMHWVSRNENNLAD RETLTKLINRSWKDTYTNLGASSGNNEDQCLRIAWTLYCSHSPANWHGYEGFKADEYIPLRTFSKRTKAETKIFIEHFVM GLAEVSHHYASIINPTTTTALFEAERIWLSKIRHTGNIANFLPLMVAARKQYQAGQISEGAYIDMLKALECYAYRVFLWA ARRSNAGKSSFYRWGYEIFTQPQLISDITRGIHQLTRYYAPEDDFINGNANPSDWYRTRNRLRYTLFEYELHLLATEGKN SEPRLGWDQLSDSTIEHILPQNPAKHSHWNGVWNKTAFNASVHDIANLVLTHNNASYSNFEFARKKGQPGLSPSYSDSDI RQERKLAAFADWTPKEFAERRNELIIWINQRWKTVGEPDNATLEVNDEADDDGIEHQEG
Sequences:
>Translated_619_residues MNKKTLTSLFAESIYQIPDYQRGYAWEEKQWKDFIQDIDALVDEQVTSHYTGTVVVYEGRDAEKRPYGRKKLKVLDVVDG QQRLTTTCLYLSVIIRALIQHGESDYERDIDDFLYAGATCKLNLNNETGDIFYDLLKTGYVNTPLQSPHQHRLVEAHRRF QHHISEQLQQRGGAGVAYLKELHYAITQKLNFTFYVIESEAEIGMTFELMNSRGKDLSVLELLKNYLMHWVSRNENNLAD RETLTKLINRSWKDTYTNLGASSGNNEDQCLRIAWTLYCSHSPANWHGYEGFKADEYIPLRTFSKRTKAETKIFIEHFVM GLAEVSHHYASIINPTTTTALFEAERIWLSKIRHTGNIANFLPLMVAARKQYQAGQISEGAYIDMLKALECYAYRVFLWA ARRSNAGKSSFYRWGYEIFTQPQLISDITRGIHQLTRYYAPEDDFINGNANPSDWYRTRNRLRYTLFEYELHLLATEGKN SEPRLGWDQLSDSTIEHILPQNPAKHSHWNGVWNKTAFNASVHDIANLVLTHNNASYSNFEFARKKGQPGLSPSYSDSDI RQERKLAAFADWTPKEFAERRNELIIWINQRWKTVGEPDNATLEVNDEADDDGIEHQEG >Mature_619_residues MNKKTLTSLFAESIYQIPDYQRGYAWEEKQWKDFIQDIDALVDEQVTSHYTGTVVVYEGRDAEKRPYGRKKLKVLDVVDG QQRLTTTCLYLSVIIRALIQHGESDYERDIDDFLYAGATCKLNLNNETGDIFYDLLKTGYVNTPLQSPHQHRLVEAHRRF QHHISEQLQQRGGAGVAYLKELHYAITQKLNFTFYVIESEAEIGMTFELMNSRGKDLSVLELLKNYLMHWVSRNENNLAD RETLTKLINRSWKDTYTNLGASSGNNEDQCLRIAWTLYCSHSPANWHGYEGFKADEYIPLRTFSKRTKAETKIFIEHFVM GLAEVSHHYASIINPTTTTALFEAERIWLSKIRHTGNIANFLPLMVAARKQYQAGQISEGAYIDMLKALECYAYRVFLWA ARRSNAGKSSFYRWGYEIFTQPQLISDITRGIHQLTRYYAPEDDFINGNANPSDWYRTRNRLRYTLFEYELHLLATEGKN SEPRLGWDQLSDSTIEHILPQNPAKHSHWNGVWNKTAFNASVHDIANLVLTHNNASYSNFEFARKKGQPGLSPSYSDSDI RQERKLAAFADWTPKEFAERRNELIIWINQRWKTVGEPDNATLEVNDEADDDGIEHQEG
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71741; Mature: 71741
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKTLTSLFAESIYQIPDYQRGYAWEEKQWKDFIQDIDALVDEQVTSHYTGTVVVYEGR CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC DAEKRPYGRKKLKVLDVVDGQQRLTTTCLYLSVIIRALIQHGESDYERDIDDFLYAGATC CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHCCCEE KLNLNNETGDIFYDLLKTGYVNTPLQSPHQHRLVEAHRRFQHHISEQLQQRGGAGVAYLK EEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ELHYAITQKLNFTFYVIESEAEIGMTFELMNSRGKDLSVLELLKNYLMHWVSRNENNLAD HHHHHHHHCCCEEEEEEECCCCCCEEHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHH RETLTKLINRSWKDTYTNLGASSGNNEDQCLRIAWTLYCSHSPANWHGYEGFKADEYIPL HHHHHHHHHCCHHHHHHHCCCCCCCCHHHEEEEEEEEEECCCCCCCCCCCCCCCCCEECH RTFSKRTKAETKIFIEHFVMGLAEVSHHYASIINPTTTTALFEAERIWLSKIRHTGNIAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHH FLPLMVAARKQYQAGQISEGAYIDMLKALECYAYRVFLWAARRSNAGKSSFYRWGYEIFT HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHC QPQLISDITRGIHQLTRYYAPEDDFINGNANPSDWYRTRNRLRYTLFEYELHLLATEGKN CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEEEEEEEECCCC SEPRLGWDQLSDSTIEHILPQNPAKHSHWNGVWNKTAFNASVHDIANLVLTHNNASYSNF CCCCCCHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCH EFARKKGQPGLSPSYSDSDIRQERKLAAFADWTPKEFAERRNELIIWINQRWKTVGEPDN HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCCCCCCC ATLEVNDEADDDGIEHQEG CEEEECCCCCCCCCCCCCC >Mature Secondary Structure MNKKTLTSLFAESIYQIPDYQRGYAWEEKQWKDFIQDIDALVDEQVTSHYTGTVVVYEGR CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC DAEKRPYGRKKLKVLDVVDGQQRLTTTCLYLSVIIRALIQHGESDYERDIDDFLYAGATC CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHCCCEE KLNLNNETGDIFYDLLKTGYVNTPLQSPHQHRLVEAHRRFQHHISEQLQQRGGAGVAYLK EEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ELHYAITQKLNFTFYVIESEAEIGMTFELMNSRGKDLSVLELLKNYLMHWVSRNENNLAD HHHHHHHHCCCEEEEEEECCCCCCEEHEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHH RETLTKLINRSWKDTYTNLGASSGNNEDQCLRIAWTLYCSHSPANWHGYEGFKADEYIPL HHHHHHHHHCCHHHHHHHCCCCCCCCHHHEEEEEEEEEECCCCCCCCCCCCCCCCCEECH RTFSKRTKAETKIFIEHFVMGLAEVSHHYASIINPTTTTALFEAERIWLSKIRHTGNIAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHH FLPLMVAARKQYQAGQISEGAYIDMLKALECYAYRVFLWAARRSNAGKSSFYRWGYEIFT HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHC QPQLISDITRGIHQLTRYYAPEDDFINGNANPSDWYRTRNRLRYTLFEYELHLLATEGKN CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEEEEEEEECCCC SEPRLGWDQLSDSTIEHILPQNPAKHSHWNGVWNKTAFNASVHDIANLVLTHNNASYSNF CCCCCCHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCH EFARKKGQPGLSPSYSDSDIRQERKLAAFADWTPKEFAERRNELIIWINQRWKTVGEPDN HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCCCCCCC ATLEVNDEADDDGIEHQEG CEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA