| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900506
Identifier: 159900506
GI number: 159900506
Start: 5093823
End: 5096441
Strand: Reverse
Name: 159900506
Synonym: Haur_3993
Alternate gene names: NA
Gene position: 5096441-5093823 (Counterclockwise)
Preceding gene: 159900507
Following gene: 159900497
Centisome position: 80.3
GC content: 49.68
Gene sequence:
>2619_bases ATGGGAACACGTCTGCTGCGGTGCTGCTTGCTGATCGGTCTATTGTTAAGTGCCATGCTTCCGCCAATCGTGGAGGCAAC ACCGAAAGCAGCGCCATTGGTGGCCATTTATATTTTGGCCTACGATAATCGGCTTGATAGCACGATGAATTTAACCCCGT ATTATGATGCAACCCTCACTAGCATCACTAATGCCACTGTTGGTCAGCCCGATCTAACGGCGATTGTGTTGGCTGATTTG GCGGGAATGAATGATACCCATGTGCGGGTTGTGCAGAATGGCAATGTCAATACCTTGATTGGCTTGCCCGATATTGATGG AATTATTGATAGCAACCTTAAAGAATATGATGTAACTGATGGCCGAACCTTGGGCGGGTTTTTATTGTGGGCCAAAAGCA GTTACACTGGCCAAAACTACACCTTGAGCTACATTGGCCATGGTGTGCCAATTATGCCCGATATCGAGATTTCAAACCTC AGCCAGCCCGAACGCCCAGTCAGCAGCGTCAATCTGCCACCGTTGCCCACCCGCATTGGGGCCAATGCCGATGTGACCGA TCACACGCTGACCACGAGTATCAGCGGCTATAATGCGCTTTCGCCCAATGATTTGGCCTTGGCTTTGGCAATTGCGGCTC CGATTGGCCCTCGCTTGGCCGTGCTCGATGTGTTGATGTGCTTTAGTGGCTCGATTGAGGCCTTATACCCACTTGCACCG TATGCCGAATATCTGACTGCCTCGCCCAACTATGCCTTTTTCGACCCAACCATGCCCGGTAATGCCTTGCTTGGCTTGAA CAGCAACCCCAACCCGCTACAAATGGCCCGACATATTCTCGATAGCTACCATAATCAACTGCCAAGCAGCGATCATCCAC GGATTTTAAGCGTGATCGATGCCGATCAATTAAATAATCTCAAAACCACGTGGGATAGTGCTTCGAACGCCATCTATACC AATTTGCTCAATCCCAGCCAGCGCGAAGTTACCCGCACAGCCTTGTTTAATGCCTACCTTGAGAGCCGAAAATACGATCT GACCTATTGTGAGCCAAGCGATTGGGAGCTGAATGCGCCCGATGGCTTGGTCGATTTGCGCAGTTTTGCTCATGGTTTGA GTCAAAGTTTCGCCAATCTCAATCCGCAAGTTGCTAGCTTTGCCGCCCAAACCCGCGATCGGATTCGCAATAATAGCGGT AATCCGATGGTCGTGGTTTATCGCTTGGCGGATAACGATTTTCCGTGGTTCGACCCAACTCCAACCCAATGGATTTTTGA TGGACTGAATCCACTTGGGCTTGATGATGATGCCGCTGGCTTGAGTTTATATGCCGATTTGCAAGGCCTCTCGGTGGCGG GAGCAACCGAATTAAGCTGGCAGGCCCATTGGTATCACGATGACGACACCCAGCCAGATAATCCGCATCCGTTAGCATTT TTAGCCGATGTGACCCATCGCAACGGCTGGGATGAAGTGTTTCAGGAATATTGGCGTGATATTGAGGTACAAACAGCGTT GTGTACGCCGAGCTTACCTGCTGCCCGCGATCAATCGACTCCTCGCGCCGACATCAGCCTAAGCCAATTTAACCCTGCCG ATAGCAACTTGGCGGTCAATGAATCGATTCGTTTGAGTGTTATGCTGAATGTCACTCGCGCAGTGCAACGTAGCGATCTC TGCTTTGAGGTTGTCTTGAATGGTACAGTCGTATTTACTGATAGTTTGATGTTGACCAAACTTGAGGCTGGTAGCCAACG AATCTATGCGCAAAAAATTTGGCAACCAACGACTGCTGGAGTTTATAGCTTGCGGGTCGTTGGCGATGGCGGCCAGCATG TGCAAGAAAGCAACGAAAATAATAATGTGCTTACCCGCTCGCTGAATATTGCGCCAACCGTGCCGCGTCGCCCAATGCTT ATTGTCAAGACCTCGAACAATCTGCAATTATCCAATAGCCCAACCGTTACGCTGAATGTTCAGCAGCAAGCGGGCAGCGG TACACCAGTTTCAAGGGTGATTATCCAAGCCTATCAATATCAGGGCAATGCTGCCAACCCGCGCTTGCAAACGCCAGTGT TGCGGGCTACTACCACGATCAATCAACCAACTTTACCAACAGTGCAATTAAGCGTAGCAGGCTTAGATCCTGGTGCGGTG GTCTTGTATGTTTGGGGCTATTCGAGCAATGGCTATAGCTTGATTCCGGCCATTGTGCGGCTAAATTATGCGCCGTTGCC CGCAACGATCAGCCAAAACCAAAAACATATCTATCGATTTAGCCTCAAGCGCGACCAAGCCCAAGCCTTTCGTTTACAAA GCCAGTTTGGCAATAGCAATTTGCACGCATGGGAACCATATATCTGGACTGCACCAACTCAACAATCAACCAGCCTTGGA TTGGATCAAATTAGCTATAATCCTACACCGCTAGCTGGCGAATACATCGTGCAAGTAAGTAGTAGTGAGGCTGGTCGCTA TCTGTTTACGGCGATACCTAATCCGCCAGCAGGTCGCAACTTTGAAACGATCACCAGTAAACAACCACGGCCAATCTTTG AGGAGCCAATCCCATTCTTGCCAATCGACCAACTGTTTATCCCAATAGTCCAACGTTAA
Upstream 100 bases:
>100_bases AATAAACGGCACTGCTAGCCAATTCAAACAATGAGGTTACCGACGCTTGCTCAGCCAGTTTTGGCTTGGGCAGGCGTTGG CGTTTGCGGAGGATTATCCC
Downstream 100 bases:
>100_bases TTCGTGGCCTTCGCCTCTGGTTCAGCGCAAAAAGCCCCTCGCTCACTCGTATGGGCGAGGGGCCACAATCCTGATGATGG ATCGGATCTACACCTGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 872; Mature: 871
Protein sequence:
>872_residues MGTRLLRCCLLIGLLLSAMLPPIVEATPKAAPLVAIYILAYDNRLDSTMNLTPYYDATLTSITNATVGQPDLTAIVLADL AGMNDTHVRVVQNGNVNTLIGLPDIDGIIDSNLKEYDVTDGRTLGGFLLWAKSSYTGQNYTLSYIGHGVPIMPDIEISNL SQPERPVSSVNLPPLPTRIGANADVTDHTLTTSISGYNALSPNDLALALAIAAPIGPRLAVLDVLMCFSGSIEALYPLAP YAEYLTASPNYAFFDPTMPGNALLGLNSNPNPLQMARHILDSYHNQLPSSDHPRILSVIDADQLNNLKTTWDSASNAIYT NLLNPSQREVTRTALFNAYLESRKYDLTYCEPSDWELNAPDGLVDLRSFAHGLSQSFANLNPQVASFAAQTRDRIRNNSG NPMVVVYRLADNDFPWFDPTPTQWIFDGLNPLGLDDDAAGLSLYADLQGLSVAGATELSWQAHWYHDDDTQPDNPHPLAF LADVTHRNGWDEVFQEYWRDIEVQTALCTPSLPAARDQSTPRADISLSQFNPADSNLAVNESIRLSVMLNVTRAVQRSDL CFEVVLNGTVVFTDSLMLTKLEAGSQRIYAQKIWQPTTAGVYSLRVVGDGGQHVQESNENNNVLTRSLNIAPTVPRRPML IVKTSNNLQLSNSPTVTLNVQQQAGSGTPVSRVIIQAYQYQGNAANPRLQTPVLRATTTINQPTLPTVQLSVAGLDPGAV VLYVWGYSSNGYSLIPAIVRLNYAPLPATISQNQKHIYRFSLKRDQAQAFRLQSQFGNSNLHAWEPYIWTAPTQQSTSLG LDQISYNPTPLAGEYIVQVSSSEAGRYLFTAIPNPPAGRNFETITSKQPRPIFEEPIPFLPIDQLFIPIVQR
Sequences:
>Translated_872_residues MGTRLLRCCLLIGLLLSAMLPPIVEATPKAAPLVAIYILAYDNRLDSTMNLTPYYDATLTSITNATVGQPDLTAIVLADL AGMNDTHVRVVQNGNVNTLIGLPDIDGIIDSNLKEYDVTDGRTLGGFLLWAKSSYTGQNYTLSYIGHGVPIMPDIEISNL SQPERPVSSVNLPPLPTRIGANADVTDHTLTTSISGYNALSPNDLALALAIAAPIGPRLAVLDVLMCFSGSIEALYPLAP YAEYLTASPNYAFFDPTMPGNALLGLNSNPNPLQMARHILDSYHNQLPSSDHPRILSVIDADQLNNLKTTWDSASNAIYT NLLNPSQREVTRTALFNAYLESRKYDLTYCEPSDWELNAPDGLVDLRSFAHGLSQSFANLNPQVASFAAQTRDRIRNNSG NPMVVVYRLADNDFPWFDPTPTQWIFDGLNPLGLDDDAAGLSLYADLQGLSVAGATELSWQAHWYHDDDTQPDNPHPLAF LADVTHRNGWDEVFQEYWRDIEVQTALCTPSLPAARDQSTPRADISLSQFNPADSNLAVNESIRLSVMLNVTRAVQRSDL CFEVVLNGTVVFTDSLMLTKLEAGSQRIYAQKIWQPTTAGVYSLRVVGDGGQHVQESNENNNVLTRSLNIAPTVPRRPML IVKTSNNLQLSNSPTVTLNVQQQAGSGTPVSRVIIQAYQYQGNAANPRLQTPVLRATTTINQPTLPTVQLSVAGLDPGAV VLYVWGYSSNGYSLIPAIVRLNYAPLPATISQNQKHIYRFSLKRDQAQAFRLQSQFGNSNLHAWEPYIWTAPTQQSTSLG LDQISYNPTPLAGEYIVQVSSSEAGRYLFTAIPNPPAGRNFETITSKQPRPIFEEPIPFLPIDQLFIPIVQR >Mature_871_residues GTRLLRCCLLIGLLLSAMLPPIVEATPKAAPLVAIYILAYDNRLDSTMNLTPYYDATLTSITNATVGQPDLTAIVLADLA GMNDTHVRVVQNGNVNTLIGLPDIDGIIDSNLKEYDVTDGRTLGGFLLWAKSSYTGQNYTLSYIGHGVPIMPDIEISNLS QPERPVSSVNLPPLPTRIGANADVTDHTLTTSISGYNALSPNDLALALAIAAPIGPRLAVLDVLMCFSGSIEALYPLAPY AEYLTASPNYAFFDPTMPGNALLGLNSNPNPLQMARHILDSYHNQLPSSDHPRILSVIDADQLNNLKTTWDSASNAIYTN LLNPSQREVTRTALFNAYLESRKYDLTYCEPSDWELNAPDGLVDLRSFAHGLSQSFANLNPQVASFAAQTRDRIRNNSGN PMVVVYRLADNDFPWFDPTPTQWIFDGLNPLGLDDDAAGLSLYADLQGLSVAGATELSWQAHWYHDDDTQPDNPHPLAFL ADVTHRNGWDEVFQEYWRDIEVQTALCTPSLPAARDQSTPRADISLSQFNPADSNLAVNESIRLSVMLNVTRAVQRSDLC FEVVLNGTVVFTDSLMLTKLEAGSQRIYAQKIWQPTTAGVYSLRVVGDGGQHVQESNENNNVLTRSLNIAPTVPRRPMLI VKTSNNLQLSNSPTVTLNVQQQAGSGTPVSRVIIQAYQYQGNAANPRLQTPVLRATTTINQPTLPTVQLSVAGLDPGAVV LYVWGYSSNGYSLIPAIVRLNYAPLPATISQNQKHIYRFSLKRDQAQAFRLQSQFGNSNLHAWEPYIWTAPTQQSTSLGL DQISYNPTPLAGEYIVQVSSSEAGRYLFTAIPNPPAGRNFETITSKQPRPIFEEPIPFLPIDQLFIPIVQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95675; Mature: 95544
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTRLLRCCLLIGLLLSAMLPPIVEATPKAAPLVAIYILAYDNRLDSTMNLTPYYDATLT CCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHH SITNATVGQPDLTAIVLADLAGMNDTHVRVVQNGNVNTLIGLPDIDGIIDSNLKEYDVTD HHCCCCCCCCCHHEEEEEHHCCCCCCEEEEEECCCEEEEEECCCCCHHHCCCCCEEECCC GRTLGGFLLWAKSSYTGQNYTLSYIGHGVPIMPDIEISNLSQPERPVSSVNLPPLPTRIG CCEECEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC ANADVTDHTLTTSISGYNALSPNDLALALAIAAPIGPRLAVLDVLMCFSGSIEALYPLAP CCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEECCCC YAEYLTASPNYAFFDPTMPGNALLGLNSNPNPLQMARHILDSYHNQLPSSDHPRILSVID HHHHHCCCCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEC ADQLNNLKTTWDSASNAIYTNLLNPSQREVTRTALFNAYLESRKYDLTYCEPSDWELNAP HHHCCCCEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC DGLVDLRSFAHGLSQSFANLNPQVASFAAQTRDRIRNNSGNPMVVVYRLADNDFPWFDPT CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCC PTQWIFDGLNPLGLDDDAAGLSLYADLQGLSVAGATELSWQAHWYHDDDTQPDNPHPLAF CHHHHHCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCEEEEEECCCCCCCCCCCCEEE LADVTHRNGWDEVFQEYWRDIEVQTALCTPSLPAARDQSTPRADISLSQFNPADSNLAVN EEECCCCCCHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEC ESIRLSVMLNVTRAVQRSDLCFEVVLNGTVVFTDSLMLTKLEAGSQRIYAQKIWQPTTAG CCEEEEEEEEHHHHHHHCCCEEEEEECCEEEEECCEEEEEECCCCCHHHHHHHCCCCCCC VYSLRVVGDGGQHVQESNENNNVLTRSLNIAPTVPRRPMLIVKTSNNLQLSNSPTVTLNV EEEEEEECCCCHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEECCCCEEEEEE QQQAGSGTPVSRVIIQAYQYQGNAANPRLQTPVLRATTTINQPTLPTVQLSVAGLDPGAV ECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEE VLYVWGYSSNGYSLIPAIVRLNYAPLPATISQNQKHIYRFSLKRDQAQAFRLQSQFGNSN EEEEEECCCCCCCCEEHHHHCCCCCCCCHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCC LHAWEPYIWTAPTQQSTSLGLDQISYNPTPLAGEYIVQVSSSEAGRYLFTAIPNPPAGRN CEEECCEEEECCCCCCCCCCCHHCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCC FETITSKQPRPIFEEPIPFLPIDQLFIPIVQR CHHHCCCCCCCHHHCCCCCCCHHHHHHHHHCC >Mature Secondary Structure GTRLLRCCLLIGLLLSAMLPPIVEATPKAAPLVAIYILAYDNRLDSTMNLTPYYDATLT CHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHH SITNATVGQPDLTAIVLADLAGMNDTHVRVVQNGNVNTLIGLPDIDGIIDSNLKEYDVTD HHCCCCCCCCCHHEEEEEHHCCCCCCEEEEEECCCEEEEEECCCCCHHHCCCCCEEECCC GRTLGGFLLWAKSSYTGQNYTLSYIGHGVPIMPDIEISNLSQPERPVSSVNLPPLPTRIG CCEECEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC ANADVTDHTLTTSISGYNALSPNDLALALAIAAPIGPRLAVLDVLMCFSGSIEALYPLAP CCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEECCCC YAEYLTASPNYAFFDPTMPGNALLGLNSNPNPLQMARHILDSYHNQLPSSDHPRILSVID HHHHHCCCCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEC ADQLNNLKTTWDSASNAIYTNLLNPSQREVTRTALFNAYLESRKYDLTYCEPSDWELNAP HHHCCCCEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC DGLVDLRSFAHGLSQSFANLNPQVASFAAQTRDRIRNNSGNPMVVVYRLADNDFPWFDPT CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCC PTQWIFDGLNPLGLDDDAAGLSLYADLQGLSVAGATELSWQAHWYHDDDTQPDNPHPLAF CHHHHHCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCEEEEEECCCCCCCCCCCCEEE LADVTHRNGWDEVFQEYWRDIEVQTALCTPSLPAARDQSTPRADISLSQFNPADSNLAVN EEECCCCCCHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEC ESIRLSVMLNVTRAVQRSDLCFEVVLNGTVVFTDSLMLTKLEAGSQRIYAQKIWQPTTAG CCEEEEEEEEHHHHHHHCCCEEEEEECCEEEEECCEEEEEECCCCCHHHHHHHCCCCCCC VYSLRVVGDGGQHVQESNENNNVLTRSLNIAPTVPRRPMLIVKTSNNLQLSNSPTVTLNV EEEEEEECCCCHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEECCCCEEEEEE QQQAGSGTPVSRVIIQAYQYQGNAANPRLQTPVLRATTTINQPTLPTVQLSVAGLDPGAV ECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEE VLYVWGYSSNGYSLIPAIVRLNYAPLPATISQNQKHIYRFSLKRDQAQAFRLQSQFGNSN EEEEEECCCCCCCCEEHHHHCCCCCCCCHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCC LHAWEPYIWTAPTQQSTSLGLDQISYNPTPLAGEYIVQVSSSEAGRYLFTAIPNPPAGRN CEEECCEEEECCCCCCCCCCCHHCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCC FETITSKQPRPIFEEPIPFLPIDQLFIPIVQR CHHHCCCCCCCHHHCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA