Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900506

Identifier: 159900506

GI number: 159900506

Start: 5093823

End: 5096441

Strand: Reverse

Name: 159900506

Synonym: Haur_3993

Alternate gene names: NA

Gene position: 5096441-5093823 (Counterclockwise)

Preceding gene: 159900507

Following gene: 159900497

Centisome position: 80.3

GC content: 49.68

Gene sequence:

>2619_bases
ATGGGAACACGTCTGCTGCGGTGCTGCTTGCTGATCGGTCTATTGTTAAGTGCCATGCTTCCGCCAATCGTGGAGGCAAC
ACCGAAAGCAGCGCCATTGGTGGCCATTTATATTTTGGCCTACGATAATCGGCTTGATAGCACGATGAATTTAACCCCGT
ATTATGATGCAACCCTCACTAGCATCACTAATGCCACTGTTGGTCAGCCCGATCTAACGGCGATTGTGTTGGCTGATTTG
GCGGGAATGAATGATACCCATGTGCGGGTTGTGCAGAATGGCAATGTCAATACCTTGATTGGCTTGCCCGATATTGATGG
AATTATTGATAGCAACCTTAAAGAATATGATGTAACTGATGGCCGAACCTTGGGCGGGTTTTTATTGTGGGCCAAAAGCA
GTTACACTGGCCAAAACTACACCTTGAGCTACATTGGCCATGGTGTGCCAATTATGCCCGATATCGAGATTTCAAACCTC
AGCCAGCCCGAACGCCCAGTCAGCAGCGTCAATCTGCCACCGTTGCCCACCCGCATTGGGGCCAATGCCGATGTGACCGA
TCACACGCTGACCACGAGTATCAGCGGCTATAATGCGCTTTCGCCCAATGATTTGGCCTTGGCTTTGGCAATTGCGGCTC
CGATTGGCCCTCGCTTGGCCGTGCTCGATGTGTTGATGTGCTTTAGTGGCTCGATTGAGGCCTTATACCCACTTGCACCG
TATGCCGAATATCTGACTGCCTCGCCCAACTATGCCTTTTTCGACCCAACCATGCCCGGTAATGCCTTGCTTGGCTTGAA
CAGCAACCCCAACCCGCTACAAATGGCCCGACATATTCTCGATAGCTACCATAATCAACTGCCAAGCAGCGATCATCCAC
GGATTTTAAGCGTGATCGATGCCGATCAATTAAATAATCTCAAAACCACGTGGGATAGTGCTTCGAACGCCATCTATACC
AATTTGCTCAATCCCAGCCAGCGCGAAGTTACCCGCACAGCCTTGTTTAATGCCTACCTTGAGAGCCGAAAATACGATCT
GACCTATTGTGAGCCAAGCGATTGGGAGCTGAATGCGCCCGATGGCTTGGTCGATTTGCGCAGTTTTGCTCATGGTTTGA
GTCAAAGTTTCGCCAATCTCAATCCGCAAGTTGCTAGCTTTGCCGCCCAAACCCGCGATCGGATTCGCAATAATAGCGGT
AATCCGATGGTCGTGGTTTATCGCTTGGCGGATAACGATTTTCCGTGGTTCGACCCAACTCCAACCCAATGGATTTTTGA
TGGACTGAATCCACTTGGGCTTGATGATGATGCCGCTGGCTTGAGTTTATATGCCGATTTGCAAGGCCTCTCGGTGGCGG
GAGCAACCGAATTAAGCTGGCAGGCCCATTGGTATCACGATGACGACACCCAGCCAGATAATCCGCATCCGTTAGCATTT
TTAGCCGATGTGACCCATCGCAACGGCTGGGATGAAGTGTTTCAGGAATATTGGCGTGATATTGAGGTACAAACAGCGTT
GTGTACGCCGAGCTTACCTGCTGCCCGCGATCAATCGACTCCTCGCGCCGACATCAGCCTAAGCCAATTTAACCCTGCCG
ATAGCAACTTGGCGGTCAATGAATCGATTCGTTTGAGTGTTATGCTGAATGTCACTCGCGCAGTGCAACGTAGCGATCTC
TGCTTTGAGGTTGTCTTGAATGGTACAGTCGTATTTACTGATAGTTTGATGTTGACCAAACTTGAGGCTGGTAGCCAACG
AATCTATGCGCAAAAAATTTGGCAACCAACGACTGCTGGAGTTTATAGCTTGCGGGTCGTTGGCGATGGCGGCCAGCATG
TGCAAGAAAGCAACGAAAATAATAATGTGCTTACCCGCTCGCTGAATATTGCGCCAACCGTGCCGCGTCGCCCAATGCTT
ATTGTCAAGACCTCGAACAATCTGCAATTATCCAATAGCCCAACCGTTACGCTGAATGTTCAGCAGCAAGCGGGCAGCGG
TACACCAGTTTCAAGGGTGATTATCCAAGCCTATCAATATCAGGGCAATGCTGCCAACCCGCGCTTGCAAACGCCAGTGT
TGCGGGCTACTACCACGATCAATCAACCAACTTTACCAACAGTGCAATTAAGCGTAGCAGGCTTAGATCCTGGTGCGGTG
GTCTTGTATGTTTGGGGCTATTCGAGCAATGGCTATAGCTTGATTCCGGCCATTGTGCGGCTAAATTATGCGCCGTTGCC
CGCAACGATCAGCCAAAACCAAAAACATATCTATCGATTTAGCCTCAAGCGCGACCAAGCCCAAGCCTTTCGTTTACAAA
GCCAGTTTGGCAATAGCAATTTGCACGCATGGGAACCATATATCTGGACTGCACCAACTCAACAATCAACCAGCCTTGGA
TTGGATCAAATTAGCTATAATCCTACACCGCTAGCTGGCGAATACATCGTGCAAGTAAGTAGTAGTGAGGCTGGTCGCTA
TCTGTTTACGGCGATACCTAATCCGCCAGCAGGTCGCAACTTTGAAACGATCACCAGTAAACAACCACGGCCAATCTTTG
AGGAGCCAATCCCATTCTTGCCAATCGACCAACTGTTTATCCCAATAGTCCAACGTTAA

Upstream 100 bases:

>100_bases
AATAAACGGCACTGCTAGCCAATTCAAACAATGAGGTTACCGACGCTTGCTCAGCCAGTTTTGGCTTGGGCAGGCGTTGG
CGTTTGCGGAGGATTATCCC

Downstream 100 bases:

>100_bases
TTCGTGGCCTTCGCCTCTGGTTCAGCGCAAAAAGCCCCTCGCTCACTCGTATGGGCGAGGGGCCACAATCCTGATGATGG
ATCGGATCTACACCTGTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 872; Mature: 871

Protein sequence:

>872_residues
MGTRLLRCCLLIGLLLSAMLPPIVEATPKAAPLVAIYILAYDNRLDSTMNLTPYYDATLTSITNATVGQPDLTAIVLADL
AGMNDTHVRVVQNGNVNTLIGLPDIDGIIDSNLKEYDVTDGRTLGGFLLWAKSSYTGQNYTLSYIGHGVPIMPDIEISNL
SQPERPVSSVNLPPLPTRIGANADVTDHTLTTSISGYNALSPNDLALALAIAAPIGPRLAVLDVLMCFSGSIEALYPLAP
YAEYLTASPNYAFFDPTMPGNALLGLNSNPNPLQMARHILDSYHNQLPSSDHPRILSVIDADQLNNLKTTWDSASNAIYT
NLLNPSQREVTRTALFNAYLESRKYDLTYCEPSDWELNAPDGLVDLRSFAHGLSQSFANLNPQVASFAAQTRDRIRNNSG
NPMVVVYRLADNDFPWFDPTPTQWIFDGLNPLGLDDDAAGLSLYADLQGLSVAGATELSWQAHWYHDDDTQPDNPHPLAF
LADVTHRNGWDEVFQEYWRDIEVQTALCTPSLPAARDQSTPRADISLSQFNPADSNLAVNESIRLSVMLNVTRAVQRSDL
CFEVVLNGTVVFTDSLMLTKLEAGSQRIYAQKIWQPTTAGVYSLRVVGDGGQHVQESNENNNVLTRSLNIAPTVPRRPML
IVKTSNNLQLSNSPTVTLNVQQQAGSGTPVSRVIIQAYQYQGNAANPRLQTPVLRATTTINQPTLPTVQLSVAGLDPGAV
VLYVWGYSSNGYSLIPAIVRLNYAPLPATISQNQKHIYRFSLKRDQAQAFRLQSQFGNSNLHAWEPYIWTAPTQQSTSLG
LDQISYNPTPLAGEYIVQVSSSEAGRYLFTAIPNPPAGRNFETITSKQPRPIFEEPIPFLPIDQLFIPIVQR

Sequences:

>Translated_872_residues
MGTRLLRCCLLIGLLLSAMLPPIVEATPKAAPLVAIYILAYDNRLDSTMNLTPYYDATLTSITNATVGQPDLTAIVLADL
AGMNDTHVRVVQNGNVNTLIGLPDIDGIIDSNLKEYDVTDGRTLGGFLLWAKSSYTGQNYTLSYIGHGVPIMPDIEISNL
SQPERPVSSVNLPPLPTRIGANADVTDHTLTTSISGYNALSPNDLALALAIAAPIGPRLAVLDVLMCFSGSIEALYPLAP
YAEYLTASPNYAFFDPTMPGNALLGLNSNPNPLQMARHILDSYHNQLPSSDHPRILSVIDADQLNNLKTTWDSASNAIYT
NLLNPSQREVTRTALFNAYLESRKYDLTYCEPSDWELNAPDGLVDLRSFAHGLSQSFANLNPQVASFAAQTRDRIRNNSG
NPMVVVYRLADNDFPWFDPTPTQWIFDGLNPLGLDDDAAGLSLYADLQGLSVAGATELSWQAHWYHDDDTQPDNPHPLAF
LADVTHRNGWDEVFQEYWRDIEVQTALCTPSLPAARDQSTPRADISLSQFNPADSNLAVNESIRLSVMLNVTRAVQRSDL
CFEVVLNGTVVFTDSLMLTKLEAGSQRIYAQKIWQPTTAGVYSLRVVGDGGQHVQESNENNNVLTRSLNIAPTVPRRPML
IVKTSNNLQLSNSPTVTLNVQQQAGSGTPVSRVIIQAYQYQGNAANPRLQTPVLRATTTINQPTLPTVQLSVAGLDPGAV
VLYVWGYSSNGYSLIPAIVRLNYAPLPATISQNQKHIYRFSLKRDQAQAFRLQSQFGNSNLHAWEPYIWTAPTQQSTSLG
LDQISYNPTPLAGEYIVQVSSSEAGRYLFTAIPNPPAGRNFETITSKQPRPIFEEPIPFLPIDQLFIPIVQR
>Mature_871_residues
GTRLLRCCLLIGLLLSAMLPPIVEATPKAAPLVAIYILAYDNRLDSTMNLTPYYDATLTSITNATVGQPDLTAIVLADLA
GMNDTHVRVVQNGNVNTLIGLPDIDGIIDSNLKEYDVTDGRTLGGFLLWAKSSYTGQNYTLSYIGHGVPIMPDIEISNLS
QPERPVSSVNLPPLPTRIGANADVTDHTLTTSISGYNALSPNDLALALAIAAPIGPRLAVLDVLMCFSGSIEALYPLAPY
AEYLTASPNYAFFDPTMPGNALLGLNSNPNPLQMARHILDSYHNQLPSSDHPRILSVIDADQLNNLKTTWDSASNAIYTN
LLNPSQREVTRTALFNAYLESRKYDLTYCEPSDWELNAPDGLVDLRSFAHGLSQSFANLNPQVASFAAQTRDRIRNNSGN
PMVVVYRLADNDFPWFDPTPTQWIFDGLNPLGLDDDAAGLSLYADLQGLSVAGATELSWQAHWYHDDDTQPDNPHPLAFL
ADVTHRNGWDEVFQEYWRDIEVQTALCTPSLPAARDQSTPRADISLSQFNPADSNLAVNESIRLSVMLNVTRAVQRSDLC
FEVVLNGTVVFTDSLMLTKLEAGSQRIYAQKIWQPTTAGVYSLRVVGDGGQHVQESNENNNVLTRSLNIAPTVPRRPMLI
VKTSNNLQLSNSPTVTLNVQQQAGSGTPVSRVIIQAYQYQGNAANPRLQTPVLRATTTINQPTLPTVQLSVAGLDPGAVV
LYVWGYSSNGYSLIPAIVRLNYAPLPATISQNQKHIYRFSLKRDQAQAFRLQSQFGNSNLHAWEPYIWTAPTQQSTSLGL
DQISYNPTPLAGEYIVQVSSSEAGRYLFTAIPNPPAGRNFETITSKQPRPIFEEPIPFLPIDQLFIPIVQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95675; Mature: 95544

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTRLLRCCLLIGLLLSAMLPPIVEATPKAAPLVAIYILAYDNRLDSTMNLTPYYDATLT
CCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHH
SITNATVGQPDLTAIVLADLAGMNDTHVRVVQNGNVNTLIGLPDIDGIIDSNLKEYDVTD
HHCCCCCCCCCHHEEEEEHHCCCCCCEEEEEECCCEEEEEECCCCCHHHCCCCCEEECCC
GRTLGGFLLWAKSSYTGQNYTLSYIGHGVPIMPDIEISNLSQPERPVSSVNLPPLPTRIG
CCEECEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
ANADVTDHTLTTSISGYNALSPNDLALALAIAAPIGPRLAVLDVLMCFSGSIEALYPLAP
CCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEECCCC
YAEYLTASPNYAFFDPTMPGNALLGLNSNPNPLQMARHILDSYHNQLPSSDHPRILSVID
HHHHHCCCCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
ADQLNNLKTTWDSASNAIYTNLLNPSQREVTRTALFNAYLESRKYDLTYCEPSDWELNAP
HHHCCCCEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
DGLVDLRSFAHGLSQSFANLNPQVASFAAQTRDRIRNNSGNPMVVVYRLADNDFPWFDPT
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCC
PTQWIFDGLNPLGLDDDAAGLSLYADLQGLSVAGATELSWQAHWYHDDDTQPDNPHPLAF
CHHHHHCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCEEEEEECCCCCCCCCCCCEEE
LADVTHRNGWDEVFQEYWRDIEVQTALCTPSLPAARDQSTPRADISLSQFNPADSNLAVN
EEECCCCCCHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEC
ESIRLSVMLNVTRAVQRSDLCFEVVLNGTVVFTDSLMLTKLEAGSQRIYAQKIWQPTTAG
CCEEEEEEEEHHHHHHHCCCEEEEEECCEEEEECCEEEEEECCCCCHHHHHHHCCCCCCC
VYSLRVVGDGGQHVQESNENNNVLTRSLNIAPTVPRRPMLIVKTSNNLQLSNSPTVTLNV
EEEEEEECCCCHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEECCCCEEEEEE
QQQAGSGTPVSRVIIQAYQYQGNAANPRLQTPVLRATTTINQPTLPTVQLSVAGLDPGAV
ECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEE
VLYVWGYSSNGYSLIPAIVRLNYAPLPATISQNQKHIYRFSLKRDQAQAFRLQSQFGNSN
EEEEEECCCCCCCCEEHHHHCCCCCCCCHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCC
LHAWEPYIWTAPTQQSTSLGLDQISYNPTPLAGEYIVQVSSSEAGRYLFTAIPNPPAGRN
CEEECCEEEECCCCCCCCCCCHHCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCC
FETITSKQPRPIFEEPIPFLPIDQLFIPIVQR
CHHHCCCCCCCHHHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
GTRLLRCCLLIGLLLSAMLPPIVEATPKAAPLVAIYILAYDNRLDSTMNLTPYYDATLT
CHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHH
SITNATVGQPDLTAIVLADLAGMNDTHVRVVQNGNVNTLIGLPDIDGIIDSNLKEYDVTD
HHCCCCCCCCCHHEEEEEHHCCCCCCEEEEEECCCEEEEEECCCCCHHHCCCCCEEECCC
GRTLGGFLLWAKSSYTGQNYTLSYIGHGVPIMPDIEISNLSQPERPVSSVNLPPLPTRIG
CCEECEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
ANADVTDHTLTTSISGYNALSPNDLALALAIAAPIGPRLAVLDVLMCFSGSIEALYPLAP
CCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEECCCC
YAEYLTASPNYAFFDPTMPGNALLGLNSNPNPLQMARHILDSYHNQLPSSDHPRILSVID
HHHHHCCCCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
ADQLNNLKTTWDSASNAIYTNLLNPSQREVTRTALFNAYLESRKYDLTYCEPSDWELNAP
HHHCCCCEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
DGLVDLRSFAHGLSQSFANLNPQVASFAAQTRDRIRNNSGNPMVVVYRLADNDFPWFDPT
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCC
PTQWIFDGLNPLGLDDDAAGLSLYADLQGLSVAGATELSWQAHWYHDDDTQPDNPHPLAF
CHHHHHCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCEEEEEECCCCCCCCCCCCEEE
LADVTHRNGWDEVFQEYWRDIEVQTALCTPSLPAARDQSTPRADISLSQFNPADSNLAVN
EEECCCCCCHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEC
ESIRLSVMLNVTRAVQRSDLCFEVVLNGTVVFTDSLMLTKLEAGSQRIYAQKIWQPTTAG
CCEEEEEEEEHHHHHHHCCCEEEEEECCEEEEECCEEEEEECCCCCHHHHHHHCCCCCCC
VYSLRVVGDGGQHVQESNENNNVLTRSLNIAPTVPRRPMLIVKTSNNLQLSNSPTVTLNV
EEEEEEECCCCHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEECCCCEEEEEE
QQQAGSGTPVSRVIIQAYQYQGNAANPRLQTPVLRATTTINQPTLPTVQLSVAGLDPGAV
ECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEE
VLYVWGYSSNGYSLIPAIVRLNYAPLPATISQNQKHIYRFSLKRDQAQAFRLQSQFGNSN
EEEEEECCCCCCCCEEHHHHCCCCCCCCHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCC
LHAWEPYIWTAPTQQSTSLGLDQISYNPTPLAGEYIVQVSSSEAGRYLFTAIPNPPAGRN
CEEECCEEEECCCCCCCCCCCHHCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCC
FETITSKQPRPIFEEPIPFLPIDQLFIPIVQR
CHHHCCCCCCCHHHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA