Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900497

Identifier: 159900497

GI number: 159900497

Start: 5082581

End: 5083171

Strand: Reverse

Name: 159900497

Synonym: Haur_3984

Alternate gene names: NA

Gene position: 5083171-5082581 (Counterclockwise)

Preceding gene: 159900506

Following gene: 159900496

Centisome position: 80.09

GC content: 48.73

Gene sequence:

>591_bases
GTGGCCAATCGCAACCGCAAATCCACCGATTCGACCAAAACAACTGCTGTTGAACGAGTTGATATCGATCGCTCGTACAA
GTTTATGATCATGACCTCCTTTATCCTCAATGTTGTGTTAATTATTGGTTTAGTCGTTTTGGCAATTGCGCTATTTGGCT
ATAAAACAGGCCTCGCGCCGCTCAAACCAACGATCGCTAAATTAACTGATACCATTGATGGGCTAAGCAATGCCACGATT
AAAGCTAGTGTGCCACTCAACGAGCAGTTGCCGATCACCTTACAAGTGCCTGTCAGCCAAAATACCAATGTGCGGATAAC
TCAAGCTGTGCCGTTGCAAGTGCCTGCCGATATCACCCTGCCTGGCGTTGGCTACCTCAAAGCCAGCGTGGCCTTGAATT
TGCCCGAAGGCTTGGAATTGCCAGTCTATTTGAGCCTGACAATTCCGCTGCAAGCCTCAGTGCCCGTCAGTTTAACTGTA
CCAGTCAATATTCCACTCAAAGATACTGAGTTAGGGCCACAATTCCGCAGCCTTGGCGAATTGGTACAGCCGCTGGCCGA
CCTTGTCAATGGGGAACCAACCGAACAATGA

Upstream 100 bases:

>100_bases
TGGGGTGAGGGAGTCAAGTTTAATCATCATGACAAGCAACGATTGGCTGTGGTATACTGCTGATGAATTTTCCCCTTCGA
GGCACTGCAAGGAGGTTGAC

Downstream 100 bases:

>100_bases
AATTGCTGCTTTGGGATATTGATGGAACCCTGATTCGGTCACATGGGCGCAGTCTTGAAGCTTTCAAGGCTGCGTTTCAG
CGTGTATACGAAGTTGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MANRNRKSTDSTKTTAVERVDIDRSYKFMIMTSFILNVVLIIGLVVLAIALFGYKTGLAPLKPTIAKLTDTIDGLSNATI
KASVPLNEQLPITLQVPVSQNTNVRITQAVPLQVPADITLPGVGYLKASVALNLPEGLELPVYLSLTIPLQASVPVSLTV
PVNIPLKDTELGPQFRSLGELVQPLADLVNGEPTEQ

Sequences:

>Translated_196_residues
MANRNRKSTDSTKTTAVERVDIDRSYKFMIMTSFILNVVLIIGLVVLAIALFGYKTGLAPLKPTIAKLTDTIDGLSNATI
KASVPLNEQLPITLQVPVSQNTNVRITQAVPLQVPADITLPGVGYLKASVALNLPEGLELPVYLSLTIPLQASVPVSLTV
PVNIPLKDTELGPQFRSLGELVQPLADLVNGEPTEQ
>Mature_195_residues
ANRNRKSTDSTKTTAVERVDIDRSYKFMIMTSFILNVVLIIGLVVLAIALFGYKTGLAPLKPTIAKLTDTIDGLSNATIK
ASVPLNEQLPITLQVPVSQNTNVRITQAVPLQVPADITLPGVGYLKASVALNLPEGLELPVYLSLTIPLQASVPVSLTVP
VNIPLKDTELGPQFRSLGELVQPLADLVNGEPTEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21021; Mature: 20890

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANRNRKSTDSTKTTAVERVDIDRSYKFMIMTSFILNVVLIIGLVVLAIALFGYKTGLAP
CCCCCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LKPTIAKLTDTIDGLSNATIKASVPLNEQLPITLQVPVSQNTNVRITQAVPLQVPADITL
CCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEEECEECCCCEEC
PGVGYLKASVALNLPEGLELPVYLSLTIPLQASVPVSLTVPVNIPLKDTELGPQFRSLGE
CCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHH
LVQPLADLVNGEPTEQ
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ANRNRKSTDSTKTTAVERVDIDRSYKFMIMTSFILNVVLIIGLVVLAIALFGYKTGLAP
CCCCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LKPTIAKLTDTIDGLSNATIKASVPLNEQLPITLQVPVSQNTNVRITQAVPLQVPADITL
CCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEEECEECCCCEEC
PGVGYLKASVALNLPEGLELPVYLSLTIPLQASVPVSLTVPVNIPLKDTELGPQFRSLGE
CCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHH
LVQPLADLVNGEPTEQ
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA