The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900455

Identifier: 159900455

GI number: 159900455

Start: 4936064

End: 4937608

Strand: Direct

Name: 159900455

Synonym: Haur_3940

Alternate gene names: NA

Gene position: 4936064-4937608 (Clockwise)

Preceding gene: 159900454

Following gene: 159900463

Centisome position: 77.78

GC content: 54.56

Gene sequence:

>1545_bases
ATGCCGATGCCGCCGTTGTGGCATCTCTCCCTGAATCGTAGCAGCGTTGCTACCACCAAGCTGCATTCCCAGATGCCCAG
TTTTGCATCCACCGCGTACCTCCGGAGGTTTCTGTTGCGACACATTGCCCGTTTCTTGGCGCTTGGTTGTCTGCTCGCCG
TGAGCATGACCCCCATCCGAGCGCAGGCGAACCCAACCTTGTGGGCTGCTGCTGCATCAACCGACACCCTCGTTCTTGCT
TCTGGTCAACTGACCCTCGCCCCGAATGCGGCCCAAGCGGCTGCGGTCTATGGCTCATACGCTCGTTTTGGAATGTTCGA
TAGTGCTCCGCAAAACATCGCTCCCGCCAATCAAGTGCTGGTTACATGGGGCGCAACTGTGCCCGCTGCCGCTAGCGTGC
GCGTCGATGTGCGTGGCTTCAATGGCCAACGCTGGAGCGATTGGACGCTTGATGTGCAATCGGGCCAAACGGTAGCTTTT
GCCACCATCGCCCGCCAAATTCAATATCGTTTGGTGCTATTGGCCAACGAGGCTGCGCCAGTCGTTGATTTTGTGCAACT
TGCGCCCAACACGCTTGCCGAAAGCGATGCCATCAGCATTATGGAAGATGAGCCGATTGCTCCAACCTACCATATTCGGG
CTACCCGGATGGGCTTGGTTGGCGATCGCACGGCCAACGGCCATATCATTCAGCCAAACGATTGGTTTGTTTCATTGCCA
TCGTTCCGCTCACTCTCATCGCGTGGCGGCGGCGAATACATGGCGCGGCTTTCCTATCGTGGCAAATCGATTGTTGTGCC
AGTTTGGGAAGTTGGGCCATGGAACATTCACGATGATTATTGGAATGTTGAGCGCGAGAAATTTGGCGATTTGCCTGTCG
GCTGGCCCCAAGATCACGCTGCCTATTTCGATGGCTACAATGGTGGCTGGGCTGAAAAAGGCCGCGTGCGATTCCCCACC
GCTGCTGATGTCGGCGATGGCGCATGGGTCGCCTTGGGCATTCCATTTAACGATGAACAAGAAGAACTTGATATTACCTT
CTTGTGGCTAGGCCGTGATCCTGGCGATAACCCCGACCCAATGCCAGTTGGCAGTGTTACGCCTGAGCCAGCCCCAATTG
AAGAATTACCAGCGGGCACGATTCAGGTCGATAATCAAGGCGAACAATTCAGCCGCTCCGATGTGGCATGGTTTGAATTT
TCGTGTGGTAAAAATCGCCATTCGTTCTGGACCTTCTCAACCAACAAGCCTGAAGAAGCAGTCAATAATGCGCGTTGGAC
AACTCCGCTTGAGGCTGGTGACTATAGCGTGACCGTGTTTGTGCCCTACTGCCCCAATGGCAAGAGCGATACAACTTCAG
CACGTTATGTTGTGCAACATGCCGATGGCGAAACTCAAGTTGTCGTCAATCAAGCGGAACATGCTGGCAACTGGGTTGAG
CTAGGCCGCTATCGCTTTGATGGTACTGGCACAGTTAGCCTCAGCGATTTGGCCGACGACCGCATGAAAGCCATTTGGTT
TGATAGCGTGCGCTGGACAAAATAA

Upstream 100 bases:

>100_bases
CTATGATATAATCCTCACGCTGTGTTAAATGCTGGAAAATCAGCTTTTAGCGCTGTCCTCACGCCACGAAGGCGGGTTGT
ATCAAGAGAGTCGGTGTGGA

Downstream 100 bases:

>100_bases
GTTCAATTCAATTATTTAGCGATCAAAGAAGCAGGGCTTGGAATTATCCAAGCCCTGCTTCTTAGTTATCCATTATTCAG
CTTATGGTTGCGGTGGCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: N-Acetylmuramoyl-L-Alanine Amidase; Peptidase

Number of amino acids: Translated: 514; Mature: 513

Protein sequence:

>514_residues
MPMPPLWHLSLNRSSVATTKLHSQMPSFASTAYLRRFLLRHIARFLALGCLLAVSMTPIRAQANPTLWAAAASTDTLVLA
SGQLTLAPNAAQAAAVYGSYARFGMFDSAPQNIAPANQVLVTWGATVPAAASVRVDVRGFNGQRWSDWTLDVQSGQTVAF
ATIARQIQYRLVLLANEAAPVVDFVQLAPNTLAESDAISIMEDEPIAPTYHIRATRMGLVGDRTANGHIIQPNDWFVSLP
SFRSLSSRGGGEYMARLSYRGKSIVVPVWEVGPWNIHDDYWNVEREKFGDLPVGWPQDHAAYFDGYNGGWAEKGRVRFPT
AADVGDGAWVALGIPFNDEQEELDITFLWLGRDPGDNPDPMPVGSVTPEPAPIEELPAGTIQVDNQGEQFSRSDVAWFEF
SCGKNRHSFWTFSTNKPEEAVNNARWTTPLEAGDYSVTVFVPYCPNGKSDTTSARYVVQHADGETQVVVNQAEHAGNWVE
LGRYRFDGTGTVSLSDLADDRMKAIWFDSVRWTK

Sequences:

>Translated_514_residues
MPMPPLWHLSLNRSSVATTKLHSQMPSFASTAYLRRFLLRHIARFLALGCLLAVSMTPIRAQANPTLWAAAASTDTLVLA
SGQLTLAPNAAQAAAVYGSYARFGMFDSAPQNIAPANQVLVTWGATVPAAASVRVDVRGFNGQRWSDWTLDVQSGQTVAF
ATIARQIQYRLVLLANEAAPVVDFVQLAPNTLAESDAISIMEDEPIAPTYHIRATRMGLVGDRTANGHIIQPNDWFVSLP
SFRSLSSRGGGEYMARLSYRGKSIVVPVWEVGPWNIHDDYWNVEREKFGDLPVGWPQDHAAYFDGYNGGWAEKGRVRFPT
AADVGDGAWVALGIPFNDEQEELDITFLWLGRDPGDNPDPMPVGSVTPEPAPIEELPAGTIQVDNQGEQFSRSDVAWFEF
SCGKNRHSFWTFSTNKPEEAVNNARWTTPLEAGDYSVTVFVPYCPNGKSDTTSARYVVQHADGETQVVVNQAEHAGNWVE
LGRYRFDGTGTVSLSDLADDRMKAIWFDSVRWTK
>Mature_513_residues
PMPPLWHLSLNRSSVATTKLHSQMPSFASTAYLRRFLLRHIARFLALGCLLAVSMTPIRAQANPTLWAAAASTDTLVLAS
GQLTLAPNAAQAAAVYGSYARFGMFDSAPQNIAPANQVLVTWGATVPAAASVRVDVRGFNGQRWSDWTLDVQSGQTVAFA
TIARQIQYRLVLLANEAAPVVDFVQLAPNTLAESDAISIMEDEPIAPTYHIRATRMGLVGDRTANGHIIQPNDWFVSLPS
FRSLSSRGGGEYMARLSYRGKSIVVPVWEVGPWNIHDDYWNVEREKFGDLPVGWPQDHAAYFDGYNGGWAEKGRVRFPTA
ADVGDGAWVALGIPFNDEQEELDITFLWLGRDPGDNPDPMPVGSVTPEPAPIEELPAGTIQVDNQGEQFSRSDVAWFEFS
CGKNRHSFWTFSTNKPEEAVNNARWTTPLEAGDYSVTVFVPYCPNGKSDTTSARYVVQHADGETQVVVNQAEHAGNWVEL
GRYRFDGTGTVSLSDLADDRMKAIWFDSVRWTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56615; Mature: 56484

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMPPLWHLSLNRSSVATTKLHSQMPSFASTAYLRRFLLRHIARFLALGCLLAVSMTPIR
CCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
AQANPTLWAAAASTDTLVLASGQLTLAPNAAQAAAVYGSYARFGMFDSAPQNIAPANQVL
ECCCCCEEEEECCCCEEEEECCEEEECCCCHHHHHHHHCHHHCCCCCCCCCCCCCCCEEE
VTWGATVPAAASVRVDVRGFNGQRWSDWTLDVQSGQTVAFATIARQIQYRLVLLANEAAP
EEECCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCEEEHHHHHHHHEEEEEEEECCCCC
VVDFVQLAPNTLAESDAISIMEDEPIAPTYHIRATRMGLVGDRTANGHIIQPNDWFVSLP
HHHHHHHCCCHHCCCCCEEEECCCCCCCEEEEEEEEECEECCCCCCCCEECCCCCEEECC
SFRSLSSRGGGEYMARLSYRGKSIVVPVWEVGPWNIHDDYWNVEREKFGDLPVGWPQDHA
CHHHHHCCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCH
AYFDGYNGGWAEKGRVRFPTAADVGDGAWVALGIPFNDEQEELDITFLWLGRDPGDNPDP
HEECCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCC
MPVGSVTPEPAPIEELPAGTIQVDNQGEQFSRSDVAWFEFSCGKNRHSFWTFSTNKPEEA
CCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCHHH
VNNARWTTPLEAGDYSVTVFVPYCPNGKSDTTSARYVVQHADGETQVVVNQAEHAGNWVE
HCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECHHHCCCEEE
LGRYRFDGTGTVSLSDLADDRMKAIWFDSVRWTK
ECCEEECCCCEEEHHHHCCCCEEEEEECCEECCC
>Mature Secondary Structure 
PMPPLWHLSLNRSSVATTKLHSQMPSFASTAYLRRFLLRHIARFLALGCLLAVSMTPIR
CCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
AQANPTLWAAAASTDTLVLASGQLTLAPNAAQAAAVYGSYARFGMFDSAPQNIAPANQVL
ECCCCCEEEEECCCCEEEEECCEEEECCCCHHHHHHHHCHHHCCCCCCCCCCCCCCCEEE
VTWGATVPAAASVRVDVRGFNGQRWSDWTLDVQSGQTVAFATIARQIQYRLVLLANEAAP
EEECCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCEEEHHHHHHHHEEEEEEEECCCCC
VVDFVQLAPNTLAESDAISIMEDEPIAPTYHIRATRMGLVGDRTANGHIIQPNDWFVSLP
HHHHHHHCCCHHCCCCCEEEECCCCCCCEEEEEEEEECEECCCCCCCCEECCCCCEEECC
SFRSLSSRGGGEYMARLSYRGKSIVVPVWEVGPWNIHDDYWNVEREKFGDLPVGWPQDHA
CHHHHHCCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCH
AYFDGYNGGWAEKGRVRFPTAADVGDGAWVALGIPFNDEQEELDITFLWLGRDPGDNPDP
HEECCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCC
MPVGSVTPEPAPIEELPAGTIQVDNQGEQFSRSDVAWFEFSCGKNRHSFWTFSTNKPEEA
CCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCHHH
VNNARWTTPLEAGDYSVTVFVPYCPNGKSDTTSARYVVQHADGETQVVVNQAEHAGNWVE
HCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECHHHCCCEEE
LGRYRFDGTGTVSLSDLADDRMKAIWFDSVRWTK
ECCEEECCCCEEEHHHHCCCCEEEEEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA