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The map label for this gene is dac [H]

Identifier: 159900433

GI number: 159900433

Start: 4911327

End: 4912055

Strand: Reverse

Name: dac [H]

Synonym: Haur_3918

Alternate gene names: 159900433

Gene position: 4912055-4911327 (Counterclockwise)

Preceding gene: 159900434

Following gene: 159900426

Centisome position: 77.4

GC content: 51.99

Gene sequence:

>729_bases
ATGAGCGAGCAAACATTTACGCCCAAACGGATTTTAGTCGTTGTAGCCCACCCTGATGATGCTGAATTTGTCTGTAGCGG
CACGTTGTCGCGCTGGTATCGCGAAGGCCATCAGATTCACTTTTGTCTTTGCACCGATGGCAATCATGGCTCAAGCGACC
CCAATATGACTCCCGAACGCTTGGCCGAGATTCGCCAAGCTGAGCAACGGGCTGCCGCTGCCTATGTTGGTGCTGATGTC
ACATTTTTAAGCTTTGAAGATGCGGCATTGGAGCCAACCCTTGAATTGCGCAAAGCCATCACGCGGGTGATTCGGCGCTA
CAAACCAGATATTGTGGTCTGCCAAGATCCATCATTTCGCTACAGCGATGATTATTTGAACCATCCCGACCATGTGGCGG
CAGGCAATGCCACTTTTGGGGCAATTATGCCAGCGGCTTCAACCCGTTTGATCTTCCCCGATTTGTTGGCGGAAGGGCTG
GAACCCCACAATGTGCGGCAAGTGTATTTAATGGGTGGCGAACGGGTTGATACCTGGATTGGCTTGACCGAAGAGGATTT
TCAGCTCAAACTCAAGGCTTTGCGCGAACACAAATGCCAATTGGGTGATTGGGAGCCAGAGCAAATGATGCGCGACTGGG
CGGTTGCTACCGCCAAATCGGCGCGTGAAGCCGGAGTTGAATGCGAATTGGCCGAATCGTTTAAGCTCGTGACCCTAGTT
CGAGATTAA

Upstream 100 bases:

>100_bases
ATAAGCCCAAAGTCGCACGCTTGCTCGCTCATTTAAGGCGTATGATTAAGCTTGGAACTAATTTGGACTGCCCTGAGCAG
TGTGTGACGAAAGGTCATCC

Downstream 100 bases:

>100_bases
GCAGGCGTTGGGCCGAACTGATAAAGCGAGGATCGTAGGCCGCAATTTCGTGCCAACGATCCTCGTCGTTTTGCAGGCCG
CTAATCAGCCGTTGCTGCAC

Product: LmbE family protein

Products: NA

Alternate protein names: N-acetylchitobiose deacetylase; Tk-Dac [H]

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSEQTFTPKRILVVVAHPDDAEFVCSGTLSRWYREGHQIHFCLCTDGNHGSSDPNMTPERLAEIRQAEQRAAAAYVGADV
TFLSFEDAALEPTLELRKAITRVIRRYKPDIVVCQDPSFRYSDDYLNHPDHVAAGNATFGAIMPAASTRLIFPDLLAEGL
EPHNVRQVYLMGGERVDTWIGLTEEDFQLKLKALREHKCQLGDWEPEQMMRDWAVATAKSAREAGVECELAESFKLVTLV
RD

Sequences:

>Translated_242_residues
MSEQTFTPKRILVVVAHPDDAEFVCSGTLSRWYREGHQIHFCLCTDGNHGSSDPNMTPERLAEIRQAEQRAAAAYVGADV
TFLSFEDAALEPTLELRKAITRVIRRYKPDIVVCQDPSFRYSDDYLNHPDHVAAGNATFGAIMPAASTRLIFPDLLAEGL
EPHNVRQVYLMGGERVDTWIGLTEEDFQLKLKALREHKCQLGDWEPEQMMRDWAVATAKSAREAGVECELAESFKLVTLV
RD
>Mature_241_residues
SEQTFTPKRILVVVAHPDDAEFVCSGTLSRWYREGHQIHFCLCTDGNHGSSDPNMTPERLAEIRQAEQRAAAAYVGADVT
FLSFEDAALEPTLELRKAITRVIRRYKPDIVVCQDPSFRYSDDYLNHPDHVAAGNATFGAIMPAASTRLIFPDLLAEGLE
PHNVRQVYLMGGERVDTWIGLTEEDFQLKLKALREHKCQLGDWEPEQMMRDWAVATAKSAREAGVECELAESFKLVTLVR
D

Specific function: Deacylates the non-reducing end of diacetylchitobiose (GlcNAc2). Can also use N-acetylglucosamine (GlcNAc) and N- acetylchitotriose (GlcNAc3). Probably involved in chitin degradation [H]

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PIGL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003737 [H]

Pfam domain/function: PF02585 PIG-L [H]

EC number: NA

Molecular weight: Translated: 27267; Mature: 27136

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQTFTPKRILVVVAHPDDAEFVCSGTLSRWYREGHQIHFCLCTDGNHGSSDPNMTPER
CCCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHH
LAEIRQAEQRAAAAYVGADVTFLSFEDAALEPTLELRKAITRVIRRYKPDIVVCQDPSFR
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCC
YSDDYLNHPDHVAAGNATFGAIMPAASTRLIFPDLLAEGLEPHNVRQVYLMGGERVDTWI
CCCCCCCCCCCEECCCCCHHEECCCCCCEEECHHHHHCCCCCCCCEEEEEECCCEEEEEE
GLTEEDFQLKLKALREHKCQLGDWEPEQMMRDWAVATAKSAREAGVECELAESFKLVTLV
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEE
RD
CC
>Mature Secondary Structure 
SEQTFTPKRILVVVAHPDDAEFVCSGTLSRWYREGHQIHFCLCTDGNHGSSDPNMTPER
CCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHH
LAEIRQAEQRAAAAYVGADVTFLSFEDAALEPTLELRKAITRVIRRYKPDIVVCQDPSFR
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCC
YSDDYLNHPDHVAAGNATFGAIMPAASTRLIFPDLLAEGLEPHNVRQVYLMGGERVDTWI
CCCCCCCCCCCEECCCCCHHEECCCCCCEEECHHHHHCCCCCCCCEEEEEECCCEEEEEE
GLTEEDFQLKLKALREHKCQLGDWEPEQMMRDWAVATAKSAREAGVECELAESFKLVTLV
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEE
RD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA