| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is chrA [H]
Identifier: 159900426
GI number: 159900426
Start: 4904206
End: 4905372
Strand: Reverse
Name: chrA [H]
Synonym: Haur_3911
Alternate gene names: 159900426
Gene position: 4905372-4904206 (Counterclockwise)
Preceding gene: 159900433
Following gene: 159900420
Centisome position: 77.29
GC content: 52.27
Gene sequence:
>1167_bases ATGGCTGATGCGCCAGGATCGGTTGGTCCACCACAGGAATCGTATCTGCGACTTTTTCTGCGCTTTTTGCGTTTTGGGTT GTTGGCTTGGGGTGGGCCTGTCGCCCAAATTGCCATGATTCGTCAAGAGTTGGTTGAGGAAGAACAGTGGATTGAGCGCG AACATTTTAATCGGGTGCTAGCAGTTTATCAAGCCTTGCCTGGCCCAGAAGCCCATGAATTATGTGTTTACTTTGGCATG GTTGCCCGTGGCCGAATCGGTGCAGTGCTGGCGGGTTTGGGCTTTATGTTGCCTGGCTTTGTGCTGATGCTGTTGCTTTC GTGGGCCTATGTGGCCTATGGCATTACCGCCGTTGGGATTGGGGCAATCCTATTTGGTTTCAAGCCAGCCGTGGCAGCCT TAATTATTCGGGCAGTCCATCGGATTGGCGAGCATGCTCTGACCAATCGCTGGCTCTGGGCGATTGCACTTGGCGCGGGA ATAGCCACACTTCTGAGGGTGCATTTTATTGCTATTTTGCTGTTAGCCGGCGTGATGTATTGGTTATTGCAAAAGCCTCA ATTAGGCCGAACTCGTTTGCATAGCTCGTGGGTGCCATTGTTGGCGGTGGCTATTTTAGCTGCACCCAGCGTACTCAGTT TATTTGGCTATGGCTTGCGCACAGGCTTGCTGACTTTTGGTGGAGCCTACACGGCCATTCCATTTTTGCAACACGATGCA GTAACCGTTGGCGGCTGGATGACCAACGAGCAATTTATTGATGGTGTGGCCTTATCAGGCATTTTGCCCGCTCCGCTGAT TATTTTCTCGACCTTTGTGGGCTATTTGGGCGGGGGCTTTGCTGGAGCATTGGCTTTAACCGCAGGCACATTTTTGCCAG CATTTTTATTTACCATTGTTGGCCACCACTGGCTCGAACGAATTATCGCCAATGCTGCAACCCATGCGTTTCTTGATGGC ATTACGGCGGCGGTGGTTGGCTTAATTACCGTCACCACCAGCCAACTCATTTTCGATGCTTGGCCGCGTGAAGTGGCTCC GGCAGTGCTGGCTTTGGCAATTGCCGCGCTCAGCTTGTGGGTGCTGTATCGCTCAAAGGCCAAGTGGGTGACAGCGGCGG TTGTGCTTGGTTCGGGGGCGTTGGGGTTATTATCGTTACTGATTTAA
Upstream 100 bases:
>100_bases TACCTAGTCTCAAGCTGACTATAGCATAGTACTCTAAGCTATGTAAAGTACTATTTTAATATACAATGCAAGCGATTGAC TGATTGCTAAGGAACTATCT
Downstream 100 bases:
>100_bases ATTGCGATGCTTTGGTAGATATAGAACACCCCTCTCCCGCATGCGAGGCGAGGGGGAACCTGCCTACCGATATCCATCGA AACTCCCCTCTCCCGCGTTT
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MADAPGSVGPPQESYLRLFLRFLRFGLLAWGGPVAQIAMIRQELVEEEQWIEREHFNRVLAVYQALPGPEAHELCVYFGM VARGRIGAVLAGLGFMLPGFVLMLLLSWAYVAYGITAVGIGAILFGFKPAVAALIIRAVHRIGEHALTNRWLWAIALGAG IATLLRVHFIAILLLAGVMYWLLQKPQLGRTRLHSSWVPLLAVAILAAPSVLSLFGYGLRTGLLTFGGAYTAIPFLQHDA VTVGGWMTNEQFIDGVALSGILPAPLIIFSTFVGYLGGGFAGALALTAGTFLPAFLFTIVGHHWLERIIANAATHAFLDG ITAAVVGLITVTTSQLIFDAWPREVAPAVLALAIAALSLWVLYRSKAKWVTAAVVLGSGALGLLSLLI
Sequences:
>Translated_388_residues MADAPGSVGPPQESYLRLFLRFLRFGLLAWGGPVAQIAMIRQELVEEEQWIEREHFNRVLAVYQALPGPEAHELCVYFGM VARGRIGAVLAGLGFMLPGFVLMLLLSWAYVAYGITAVGIGAILFGFKPAVAALIIRAVHRIGEHALTNRWLWAIALGAG IATLLRVHFIAILLLAGVMYWLLQKPQLGRTRLHSSWVPLLAVAILAAPSVLSLFGYGLRTGLLTFGGAYTAIPFLQHDA VTVGGWMTNEQFIDGVALSGILPAPLIIFSTFVGYLGGGFAGALALTAGTFLPAFLFTIVGHHWLERIIANAATHAFLDG ITAAVVGLITVTTSQLIFDAWPREVAPAVLALAIAALSLWVLYRSKAKWVTAAVVLGSGALGLLSLLI >Mature_387_residues ADAPGSVGPPQESYLRLFLRFLRFGLLAWGGPVAQIAMIRQELVEEEQWIEREHFNRVLAVYQALPGPEAHELCVYFGMV ARGRIGAVLAGLGFMLPGFVLMLLLSWAYVAYGITAVGIGAILFGFKPAVAALIIRAVHRIGEHALTNRWLWAIALGAGI ATLLRVHFIAILLLAGVMYWLLQKPQLGRTRLHSSWVPLLAVAILAAPSVLSLFGYGLRTGLLTFGGAYTAIPFLQHDAV TVGGWMTNEQFIDGVALSGILPAPLIIFSTFVGYLGGGFAGALALTAGTFLPAFLFTIVGHHWLERIIANAATHAFLDGI TAAVVGLITVTTSQLIFDAWPREVAPAVLALAIAALSLWVLYRSKAKWVTAAVVLGSGALGLLSLLI
Specific function: This protein reduces chromate accumulation and is essential for chromate resistance [H]
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 41540; Mature: 41409
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAPGSVGPPQESYLRLFLRFLRFGLLAWGGPVAQIAMIRQELVEEEQWIEREHFNRVL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVYQALPGPEAHELCVYFGMVARGRIGAVLAGLGFMLPGFVLMLLLSWAYVAYGITAVGI HHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAILFGFKPAVAALIIRAVHRIGEHALTNRWLWAIALGAGIATLLRVHFIAILLLAGVMY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLLQKPQLGRTRLHSSWVPLLAVAILAAPSVLSLFGYGLRTGLLTFGGAYTAIPFLQHDA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC VTVGGWMTNEQFIDGVALSGILPAPLIIFSTFVGYLGGGFAGALALTAGTFLPAFLFTIV EEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GHHWLERIIANAATHAFLDGITAAVVGLITVTTSQLIFDAWPREVAPAVLALAIAALSLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VLYRSKAKWVTAAVVLGSGALGLLSLLI HHHHHHHHHHHHHHHHCCCHHHHHHHHC >Mature Secondary Structure ADAPGSVGPPQESYLRLFLRFLRFGLLAWGGPVAQIAMIRQELVEEEQWIEREHFNRVL CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVYQALPGPEAHELCVYFGMVARGRIGAVLAGLGFMLPGFVLMLLLSWAYVAYGITAVGI HHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAILFGFKPAVAALIIRAVHRIGEHALTNRWLWAIALGAGIATLLRVHFIAILLLAGVMY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLLQKPQLGRTRLHSSWVPLLAVAILAAPSVLSLFGYGLRTGLLTFGGAYTAIPFLQHDA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC VTVGGWMTNEQFIDGVALSGILPAPLIIFSTFVGYLGGGFAGALALTAGTFLPAFLFTIV EEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GHHWLERIIANAATHAFLDGITAAVVGLITVTTSQLIFDAWPREVAPAVLALAIAALSLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VLYRSKAKWVTAAVVLGSGALGLLSLLI HHHHHHHHHHHHHHHHCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2152903 [H]