| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900423
Identifier: 159900423
GI number: 159900423
Start: 4898912
End: 4899154
Strand: Direct
Name: 159900423
Synonym: Haur_3908
Alternate gene names: NA
Gene position: 4898912-4899154 (Clockwise)
Preceding gene: 159900422
Following gene: 159900424
Centisome position: 77.19
GC content: 46.5
Gene sequence:
>243_bases ATGCGTGGTCGCTTACACTCGACTGACGAACGTTTAATCGATGATGACTTGACTGAACTAGCCGACGAGTTGTCGATTCG GCTCTATGCAACAATGGGGCATCGAGTCTATTTGCTCAGTCGCCCTGATATTATCCAGCTCACCAAATCGTATATCGACG ATTTGCATCCCGAAGATCAAGATGCAATCTGTTGGTTGATTTGGGATCTCTTCCAAGAAGGCATGCAGATGGAGTTTGGT TAG
Upstream 100 bases:
>100_bases AAACCAACCAATACCACTTCGATGGATCGCTCGCCCATGGATCGACCTGGCGGTTACTCACGCTAGGTTTTAACTTAATA CAAACCCTTGGAGGTGGCCG
Downstream 100 bases:
>100_bases ACCCAAACCCAAGCTGAATGATCAACGCCGCTTTCGCAATGAAAAGCGGCGTTTGTGCTTTTGCCCCTAAAGCATTCTGG CTCACGCTTGCGTAGAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MRGRLHSTDERLIDDDLTELADELSIRLYATMGHRVYLLSRPDIIQLTKSYIDDLHPEDQDAICWLIWDLFQEGMQMEFG
Sequences:
>Translated_80_residues MRGRLHSTDERLIDDDLTELADELSIRLYATMGHRVYLLSRPDIIQLTKSYIDDLHPEDQDAICWLIWDLFQEGMQMEFG >Mature_80_residues MRGRLHSTDERLIDDDLTELADELSIRLYATMGHRVYLLSRPDIIQLTKSYIDDLHPEDQDAICWLIWDLFQEGMQMEFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9470; Mature: 9470
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRLHSTDERLIDDDLTELADELSIRLYATMGHRVYLLSRPDIIQLTKSYIDDLHPEDQ CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHCCCCCC DAICWLIWDLFQEGMQMEFG CHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRGRLHSTDERLIDDDLTELADELSIRLYATMGHRVYLLSRPDIIQLTKSYIDDLHPEDQ CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHCCCCCC DAICWLIWDLFQEGMQMEFG CHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA