| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900424
Identifier: 159900424
GI number: 159900424
Start: 4899285
End: 4901336
Strand: Direct
Name: 159900424
Synonym: Haur_3909
Alternate gene names: NA
Gene position: 4899285-4901336 (Clockwise)
Preceding gene: 159900423
Following gene: 159900425
Centisome position: 77.2
GC content: 51.12
Gene sequence:
>2052_bases ATGCACGTTTACGCTCGTATCGATATTGAATGGTCGGCAGCACCAGCCCTCATCCACGCTAGCCTCGCTGCTCGACAAGG TTGGTTGTTGGGAGCTGTTATCGCTGATCGCTGGCTTTGGGCTGATCAAACTTGGCAGATTACTCCAAACCATAGCTCGC AACGCTTGCATTGGCAAGCACAGAGCATCACGCAACCAAGCCTCAAAGCCGATTTGCTGCTCGAATTGCTGGATAGTGTT TCCAGCACTCACGTTCGGGCCACCTTGCATGTTGAATGGCCTAAAACCACGTTTAAATTATGGCGCTATTGGCAACGCCG TCGCTGGTTACACAACGAATTAACCAACGTTTTGCAACATTGGCGCGACGCTTGGACAACCCAATCCACGCCAAGCGACC AACTTGCCCAAAGCCATCCGCGCACATGGCAAGCTTTCCACACCATGAATGCGCTCGATCAACTCCAACGGATTCAAGCA CTCGATCGACGTTGGCAGCAATTTGAGCATGGCCAACTGCCCAACTTGCCCTATAGCCAGACCGATCAATTGCCCAAGGC TGATCTGGCGGTCGATTTGGTCTATGCTGGCGGCGGCTTGGGCTTGATTCATGCCACGCTGATGGCTCGCAAAGGGCTAA ATGTGCTGGTGTTTGATCGGCATCAGGTTGGTTGCGCTCATCGCGAATGGAATATTTCGCAGGCTGAACTTGAACGCTTA GTAGCAACTGGCTTTATCTCGTGGGAAATCCTCGAACGCCAGATTATTATGGCGCGTTACCACGATGGGATTGTGCGCTT TCACGCGGCTGGCTCTGCCGTTGCTCCTGCCGAATTACACTTACCCGAAGTATTAGATATTGCGCTCGATGCTGGTGCGT TGCTCGATTATGCCCGCCAACAGTTTCTGGCTGCAGGCGGCATTATTTGGGATAACACCAGTTTTGAGCATGTCTATCAC GATCCAAAGCAGCAACAAACTGTCGTAGCCGTGCACAAAGCAGATCAAACGCAACTGATAGCTGCCCGTTTGCTGATCGA TGCTATGGGTGCAACCTCGCCATTAACCCTGGCAACCCAACCATTTGCTGGCATCTGTCCAACCGTTGGCACGGTGCTTA GTGGCGCGGAGCATGACCAAAACTTGGGCGATATTTTGATCAGCATTGCCGATACCCAAGCTGATCGCCAACTGATTTGG GAAGGCTTTCCAGGCCGTGAGCATGAACTGACGGTCTATGTGTTTTACTATGATCAGGTTGGAGCCAAAGCCAAATATCG CCATTCGCTGCTGGATTTATTTGAAGATTACTTTGAACTCTTGCCAAGTTATAAGCAGCTTCAAGCGAATGCTCAGCATC TCCGTCCGGTTTTTGGCTATATTCCAGCGCGTCATGCCTTGAACAAACCTAAACCTTTGGCAGGCGTTTTGGCTTTGGGC GATGCCTCAGCCCAACAATCGCCGTTGACATTTTGTGGCTTCGGCTCGTTTGTCCGCAACTTAAGCCGTACCACCGATTT GCTCGAACAAGCACTTGAACAAGCGTTGCTTGCCCCTCAGCAGCTTAGTTTGATTAGCGCCTATCAAAGCAATGTCAGCA TGAATTGGGTATTTAGCCGTTTTATGACTCCATGGGGTCGCCCGCAAGATGTCAATGAGCTGCAAAATGTCTTTGCTCAT GTGCTCAATCGCTTGGGATACGACCTCGCACGGCGCTTTTTCCAAGATCAAATGACTTGGCACGATTATAATCGGGTCGT CTTAGGCACGCTGGCCTTCTACCCACGGATTATGCAAGTTGCTTGGCAAGTGCTTGGTTGGCGCGATTGGCTGCGCTGGA TTGGCGATTGGCTGCGATTTAGCCGCGCAGCATTCATTGCCCAGTTTGGTCAACAATTACCAAGTTGGTTGGTTGGCCGC TTGCCTAAACCATGGCTTTTTCAGTACAATGCAGCCTATGCCGAATGGCGAGCGATGGGTTGGCTCAAATCTAGCCCTGA GCATCAAAGCCAAGCGCTTGGTTCACAACCCTCAATCAAGCAATTTGGCTAG
Upstream 100 bases:
>100_bases CTTTCGCAATGAAAAGCGGCGTTTGTGCTTTTGCCCCTAAAGCATTCTGGCTCACGCTTGCGTAGAATCCAGCAAATGCT TTATCACGATTGTGGGGATT
Downstream 100 bases:
>100_bases CTCTTTTTTGGATTGGCTCACGTTGTTGTTTTTTGGCAGCAACTATTGAGAAGTGTGTATGCGACGTTCGCCACTTGCTC GGATTCGCAATGCCCTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 683; Mature: 683
Protein sequence:
>683_residues MHVYARIDIEWSAAPALIHASLAARQGWLLGAVIADRWLWADQTWQITPNHSSQRLHWQAQSITQPSLKADLLLELLDSV SSTHVRATLHVEWPKTTFKLWRYWQRRRWLHNELTNVLQHWRDAWTTQSTPSDQLAQSHPRTWQAFHTMNALDQLQRIQA LDRRWQQFEHGQLPNLPYSQTDQLPKADLAVDLVYAGGGLGLIHATLMARKGLNVLVFDRHQVGCAHREWNISQAELERL VATGFISWEILERQIIMARYHDGIVRFHAAGSAVAPAELHLPEVLDIALDAGALLDYARQQFLAAGGIIWDNTSFEHVYH DPKQQQTVVAVHKADQTQLIAARLLIDAMGATSPLTLATQPFAGICPTVGTVLSGAEHDQNLGDILISIADTQADRQLIW EGFPGREHELTVYVFYYDQVGAKAKYRHSLLDLFEDYFELLPSYKQLQANAQHLRPVFGYIPARHALNKPKPLAGVLALG DASAQQSPLTFCGFGSFVRNLSRTTDLLEQALEQALLAPQQLSLISAYQSNVSMNWVFSRFMTPWGRPQDVNELQNVFAH VLNRLGYDLARRFFQDQMTWHDYNRVVLGTLAFYPRIMQVAWQVLGWRDWLRWIGDWLRFSRAAFIAQFGQQLPSWLVGR LPKPWLFQYNAAYAEWRAMGWLKSSPEHQSQALGSQPSIKQFG
Sequences:
>Translated_683_residues MHVYARIDIEWSAAPALIHASLAARQGWLLGAVIADRWLWADQTWQITPNHSSQRLHWQAQSITQPSLKADLLLELLDSV SSTHVRATLHVEWPKTTFKLWRYWQRRRWLHNELTNVLQHWRDAWTTQSTPSDQLAQSHPRTWQAFHTMNALDQLQRIQA LDRRWQQFEHGQLPNLPYSQTDQLPKADLAVDLVYAGGGLGLIHATLMARKGLNVLVFDRHQVGCAHREWNISQAELERL VATGFISWEILERQIIMARYHDGIVRFHAAGSAVAPAELHLPEVLDIALDAGALLDYARQQFLAAGGIIWDNTSFEHVYH DPKQQQTVVAVHKADQTQLIAARLLIDAMGATSPLTLATQPFAGICPTVGTVLSGAEHDQNLGDILISIADTQADRQLIW EGFPGREHELTVYVFYYDQVGAKAKYRHSLLDLFEDYFELLPSYKQLQANAQHLRPVFGYIPARHALNKPKPLAGVLALG DASAQQSPLTFCGFGSFVRNLSRTTDLLEQALEQALLAPQQLSLISAYQSNVSMNWVFSRFMTPWGRPQDVNELQNVFAH VLNRLGYDLARRFFQDQMTWHDYNRVVLGTLAFYPRIMQVAWQVLGWRDWLRWIGDWLRFSRAAFIAQFGQQLPSWLVGR LPKPWLFQYNAAYAEWRAMGWLKSSPEHQSQALGSQPSIKQFG >Mature_683_residues MHVYARIDIEWSAAPALIHASLAARQGWLLGAVIADRWLWADQTWQITPNHSSQRLHWQAQSITQPSLKADLLLELLDSV SSTHVRATLHVEWPKTTFKLWRYWQRRRWLHNELTNVLQHWRDAWTTQSTPSDQLAQSHPRTWQAFHTMNALDQLQRIQA LDRRWQQFEHGQLPNLPYSQTDQLPKADLAVDLVYAGGGLGLIHATLMARKGLNVLVFDRHQVGCAHREWNISQAELERL VATGFISWEILERQIIMARYHDGIVRFHAAGSAVAPAELHLPEVLDIALDAGALLDYARQQFLAAGGIIWDNTSFEHVYH DPKQQQTVVAVHKADQTQLIAARLLIDAMGATSPLTLATQPFAGICPTVGTVLSGAEHDQNLGDILISIADTQADRQLIW EGFPGREHELTVYVFYYDQVGAKAKYRHSLLDLFEDYFELLPSYKQLQANAQHLRPVFGYIPARHALNKPKPLAGVLALG DASAQQSPLTFCGFGSFVRNLSRTTDLLEQALEQALLAPQQLSLISAYQSNVSMNWVFSRFMTPWGRPQDVNELQNVFAH VLNRLGYDLARRFFQDQMTWHDYNRVVLGTLAFYPRIMQVAWQVLGWRDWLRWIGDWLRFSRAAFIAQFGQQLPSWLVGR LPKPWLFQYNAAYAEWRAMGWLKSSPEHQSQALGSQPSIKQFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78036; Mature: 78036
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVYARIDIEWSAAPALIHASLAARQGWLLGAVIADRWLWADQTWQITPNHSSQRLHWQA CEEEEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHEECCCCEEECCCCCCCEEEEEH QSITQPSLKADLLLELLDSVSSTHVRATLHVEWPKTTFKLWRYWQRRRWLHNELTNVLQH HHCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH WRDAWTTQSTPSDQLAQSHPRTWQAFHTMNALDQLQRIQALDRRWQQFEHGQLPNLPYSQ HHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TDQLPKADLAVDLVYAGGGLGLIHATLMARKGLNVLVFDRHQVGCAHREWNISQAELERL CCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHH VATGFISWEILERQIIMARYHDGIVRFHAAGSAVAPAELHLPEVLDIALDAGALLDYARQ HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHH QFLAAGGIIWDNTSFEHVYHDPKQQQTVVAVHKADQTQLIAARLLIDAMGATSPLTLATQ HHHHHCCEEECCCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEECC PFAGICPTVGTVLSGAEHDQNLGDILISIADTQADRQLIWEGFPGREHELTVYVFYYDQV CCCCCCHHHHHHHCCCCCCCCHHHHEEEHHCCCCCHHHHHCCCCCCCCEEEEEEEEECCC GAKAKYRHSLLDLFEDYFELLPSYKQLQANAQHLRPVFGYIPARHALNKPKPLAGVLALG CCHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCHHHHCCCCCCCCCEEEEC DASAQQSPLTFCGFGSFVRNLSRTTDLLEQALEQALLAPQQLSLISAYQSNVSMNWVFSR CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH FMTPWGRPQDVNELQNVFAHVLNRLGYDLARRFFQDQMTWHDYNRVVLGTLAFYPRIMQV HCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHH AWQVLGWRDWLRWIGDWLRFSRAAFIAQFGQQLPSWLVGRLPKPWLFQYNAAYAEWRAMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHH WLKSSPEHQSQALGSQPSIKQFG CCCCCCCHHHHHCCCCCCHHCCC >Mature Secondary Structure MHVYARIDIEWSAAPALIHASLAARQGWLLGAVIADRWLWADQTWQITPNHSSQRLHWQA CEEEEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHEECCCCEEECCCCCCCEEEEEH QSITQPSLKADLLLELLDSVSSTHVRATLHVEWPKTTFKLWRYWQRRRWLHNELTNVLQH HHCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH WRDAWTTQSTPSDQLAQSHPRTWQAFHTMNALDQLQRIQALDRRWQQFEHGQLPNLPYSQ HHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TDQLPKADLAVDLVYAGGGLGLIHATLMARKGLNVLVFDRHQVGCAHREWNISQAELERL CCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHH VATGFISWEILERQIIMARYHDGIVRFHAAGSAVAPAELHLPEVLDIALDAGALLDYARQ HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHH QFLAAGGIIWDNTSFEHVYHDPKQQQTVVAVHKADQTQLIAARLLIDAMGATSPLTLATQ HHHHHCCEEECCCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEECC PFAGICPTVGTVLSGAEHDQNLGDILISIADTQADRQLIWEGFPGREHELTVYVFYYDQV CCCCCCHHHHHHHCCCCCCCCHHHHEEEHHCCCCCHHHHHCCCCCCCCEEEEEEEEECCC GAKAKYRHSLLDLFEDYFELLPSYKQLQANAQHLRPVFGYIPARHALNKPKPLAGVLALG CCHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCHHHHCCCCCCCCCEEEEC DASAQQSPLTFCGFGSFVRNLSRTTDLLEQALEQALLAPQQLSLISAYQSNVSMNWVFSR CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH FMTPWGRPQDVNELQNVFAHVLNRLGYDLARRFFQDQMTWHDYNRVVLGTLAFYPRIMQV HCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHH AWQVLGWRDWLRWIGDWLRFSRAAFIAQFGQQLPSWLVGRLPKPWLFQYNAAYAEWRAMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHH WLKSSPEHQSQALGSQPSIKQFG CCCCCCCHHHHHCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA