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The map label for this gene is gpsA [H]

Identifier: 159900398

GI number: 159900398

Start: 4875536

End: 4876570

Strand: Reverse

Name: gpsA [H]

Synonym: Haur_3883

Alternate gene names: 159900398

Gene position: 4876570-4875536 (Counterclockwise)

Preceding gene: 159900401

Following gene: 159900397

Centisome position: 76.84

GC content: 56.14

Gene sequence:

>1035_bases
ATGAACCAACGGCTTGATGTAGCTGTCATTGGCACTGGCAATTGGGGCACAACTTTAGCCTTGGTTTTGGCTCGCGGCGG
GCGGAATGTCACGCTATTTGGCCGCAACCAAGCTGAAGTTGCCCAATTGCAGGCTGCTGGCGAAAACAGCCGCTTTTTGC
CTGGGCAGCGCTTTCCAGCAAATTTGGGCTTGGCCTGTGATCTCGCGCTGGCCGCTCAAGCCCAAGTTATTCTCCTCGCT
GTGCCTTCGAAAACGATTCGCAGCAATGCGCTCCAACTTGCTCCACAGCTCGTTGCCGATAGTATTATTTTGAGTTGCGC
TAAGGGTATCGAGTCGGGCAGCCTTGAAACCATGAGCGAAGTGCTGGCCGAGGCGCTTGCGCCGCATCCCCGTGGCTTGA
TTGGGGCACTTTCGGGGCCAAATATTGCCAACGAAATTGCCCAAGGCCTGCCTGCAACCAGTGTTGTAGCATTAAGCGAT
GATCAAGCTGGGCAGCGGGCGCAGAGCTTGCTCACCACCAATCTGCTGCGGATCTATCGTTCGAGTGATGTGGTTGGGGT
TGAGCTGGGCGGGGCACTCAAAAATATTGTGGCACTCGGCGCGGGCATTTGCGATGGCATGGGCTTGGGCGATAATGCCA
AAGCGGCATTTATCACCCGTGGTTTGGCCGAAATGACCCGTTTGGGCATGGCACGCGGCGCACATCCGCTGACCTTTGCA
GGCTTGGCGGGCTTAGGTGATTTAATTGCCACGTGTGCCTCGCCGCACAGCCGCAATCGCCGCTTGGGTGAAGCCTTAGC
CCGTGGCCAATCGCTCGAAATGGCTTTGGCTCAGCTTGGGCAGGTGGCCGAAGGCGTGAATACCACTGCCACGGCCCGTC
AATTGGCCGAGCAGTATGGAGTCGAATTGCCAATTGCTGATGAGTTGTATCGCGTCTTATTTGAGGGCAAATCGCCACAG
CAAGCAGGCCTCGATTTGATGCAGCGCGACCCCAAAAACGAATTGGCTGGGTTGCAAGGGCTATTTTCAATTTAG

Upstream 100 bases:

>100_bases
TCACAACCTGCAATTGCTGGTTCATGATTGTTCAATGTGGGACGCTTAGGAATAATGGTATGCTAAGAGCACCTGAATCG
CAACATTTGGAGACACAATT

Downstream 100 bases:

>100_bases
CAAGGGAGTTTGGGTATGCAGGAGCTACGAACATTCAACCACAACCATCTCGCCGAATTGGCTCCTTTGATCGCCGCCAG
CACCGCCGAAGGCTATAGCA

Product: glycerol-3-phosphate dehydrogenase (NAD(P)(+))

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MNQRLDVAVIGTGNWGTTLALVLARGGRNVTLFGRNQAEVAQLQAAGENSRFLPGQRFPANLGLACDLALAAQAQVILLA
VPSKTIRSNALQLAPQLVADSIILSCAKGIESGSLETMSEVLAEALAPHPRGLIGALSGPNIANEIAQGLPATSVVALSD
DQAGQRAQSLLTTNLLRIYRSSDVVGVELGGALKNIVALGAGICDGMGLGDNAKAAFITRGLAEMTRLGMARGAHPLTFA
GLAGLGDLIATCASPHSRNRRLGEALARGQSLEMALAQLGQVAEGVNTTATARQLAEQYGVELPIADELYRVLFEGKSPQ
QAGLDLMQRDPKNELAGLQGLFSI

Sequences:

>Translated_344_residues
MNQRLDVAVIGTGNWGTTLALVLARGGRNVTLFGRNQAEVAQLQAAGENSRFLPGQRFPANLGLACDLALAAQAQVILLA
VPSKTIRSNALQLAPQLVADSIILSCAKGIESGSLETMSEVLAEALAPHPRGLIGALSGPNIANEIAQGLPATSVVALSD
DQAGQRAQSLLTTNLLRIYRSSDVVGVELGGALKNIVALGAGICDGMGLGDNAKAAFITRGLAEMTRLGMARGAHPLTFA
GLAGLGDLIATCASPHSRNRRLGEALARGQSLEMALAQLGQVAEGVNTTATARQLAEQYGVELPIADELYRVLFEGKSPQ
QAGLDLMQRDPKNELAGLQGLFSI
>Mature_344_residues
MNQRLDVAVIGTGNWGTTLALVLARGGRNVTLFGRNQAEVAQLQAAGENSRFLPGQRFPANLGLACDLALAAQAQVILLA
VPSKTIRSNALQLAPQLVADSIILSCAKGIESGSLETMSEVLAEALAPHPRGLIGALSGPNIANEIAQGLPATSVVALSD
DQAGQRAQSLLTTNLLRIYRSSDVVGVELGGALKNIVALGAGICDGMGLGDNAKAAFITRGLAEMTRLGMARGAHPLTFA
GLAGLGDLIATCASPHSRNRRLGEALARGQSLEMALAQLGQVAEGVNTTATARQLAEQYGVELPIADELYRVLFEGKSPQ
QAGLDLMQRDPKNELAGLQGLFSI

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI33695088, Length=352, Percent_Identity=33.5227272727273, Blast_Score=162, Evalue=6e-40,
Organism=Homo sapiens, GI24307999, Length=354, Percent_Identity=30.7909604519774, Blast_Score=151, Evalue=1e-36,
Organism=Escherichia coli, GI1790037, Length=338, Percent_Identity=43.491124260355, Blast_Score=259, Evalue=1e-70,
Organism=Caenorhabditis elegans, GI32564399, Length=353, Percent_Identity=28.6118980169972, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17507425, Length=366, Percent_Identity=28.4153005464481, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI193210136, Length=362, Percent_Identity=28.1767955801105, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI32564403, Length=362, Percent_Identity=28.1767955801105, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI193210134, Length=349, Percent_Identity=26.0744985673352, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6320181, Length=360, Percent_Identity=28.3333333333333, Blast_Score=122, Evalue=8e-29,
Organism=Saccharomyces cerevisiae, GI6324513, Length=346, Percent_Identity=28.9017341040462, Blast_Score=112, Evalue=6e-26,
Organism=Drosophila melanogaster, GI17136204, Length=358, Percent_Identity=29.8882681564246, Blast_Score=142, Evalue=3e-34,
Organism=Drosophila melanogaster, GI17136200, Length=358, Percent_Identity=29.8882681564246, Blast_Score=142, Evalue=4e-34,
Organism=Drosophila melanogaster, GI17136202, Length=358, Percent_Identity=29.8882681564246, Blast_Score=142, Evalue=4e-34,
Organism=Drosophila melanogaster, GI22026922, Length=345, Percent_Identity=26.3768115942029, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI281362270, Length=243, Percent_Identity=31.2757201646091, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI45551945, Length=243, Percent_Identity=31.2757201646091, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24648969, Length=185, Percent_Identity=34.5945945945946, Blast_Score=91, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 35656; Mature: 35656

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS00957 NAD_G3PDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRLDVAVIGTGNWGTTLALVLARGGRNVTLFGRNQAEVAQLQAAGENSRFLPGQRFPA
CCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCC
NLGLACDLALAAQAQVILLAVPSKTIRSNALQLAPQLVADSIILSCAKGIESGSLETMSE
CCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VLAEALAPHPRGLIGALSGPNIANEIAQGLPATSVVALSDDQAGQRAQSLLTTNLLRIYR
HHHHHHCCCCCCEEECCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
SSDVVGVELGGALKNIVALGAGICDGMGLGDNAKAAFITRGLAEMTRLGMARGAHPLTFA
CCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
GLAGLGDLIATCASPHSRNRRLGEALARGQSLEMALAQLGQVAEGVNTTATARQLAEQYG
HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
VELPIADELYRVLFEGKSPQQAGLDLMQRDPKNELAGLQGLFSI
CCCCCHHHHHHHHHCCCCCHHHCCHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNQRLDVAVIGTGNWGTTLALVLARGGRNVTLFGRNQAEVAQLQAAGENSRFLPGQRFPA
CCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCC
NLGLACDLALAAQAQVILLAVPSKTIRSNALQLAPQLVADSIILSCAKGIESGSLETMSE
CCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VLAEALAPHPRGLIGALSGPNIANEIAQGLPATSVVALSDDQAGQRAQSLLTTNLLRIYR
HHHHHHCCCCCCEEECCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
SSDVVGVELGGALKNIVALGAGICDGMGLGDNAKAAFITRGLAEMTRLGMARGAHPLTFA
CCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
GLAGLGDLIATCASPHSRNRRLGEALARGQSLEMALAQLGQVAEGVNTTATARQLAEQYG
HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
VELPIADELYRVLFEGKSPQQAGLDLMQRDPKNELAGLQGLFSI
CCCCCHHHHHHHHHCCCCCHHHCCHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]