| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159900389
Identifier: 159900389
GI number: 159900389
Start: 4867124
End: 4867564
Strand: Reverse
Name: 159900389
Synonym: Haur_3874
Alternate gene names: NA
Gene position: 4867564-4867124 (Counterclockwise)
Preceding gene: 159900390
Following gene: 159900388
Centisome position: 76.7
GC content: 53.51
Gene sequence:
>441_bases ATGATCACCGTTACCCGCGAACGTCAACTCCGCCGCCCAATCAGCGAACTCTGGCAACTGTTGGCCAATCCGCATAATTT GCCGCGAATTTTGCCACGCATCGCCCGCGTCGAAGTCAGTGAGCTAGCTAATGATCGCCAACCAGTAACTGCCTATTTCG ATTTTGGCATTCCGCTTGGGACGCAGGCCGCCCAAGGCACATTTAGCCTGATCGAGCAACAATCGATTCGCTTTGATGCC GAACAACCCTTGCCAATTATGGCTCACTGGCAACTCCAACCTCATGCCAATAACACCAAAGTGCATGCCAGCCTCAGCTT CGATCTTAAACCAATTTTGGGGCCAGTCGCCAAAGTTGTGCCGATGAGCATCGTCAAAAGCGAAGTTTCGCGTGAGCTAG AGCAAGCGCTCGCCCGCATCGAACGCCTACGTCTGAGCTAG
Upstream 100 bases:
>100_bases TGGCCGCAATTGGCCGCAATGGCGACCGAATGCCCCAATTCAAGCCTTTTCATTGGAACTAGCGGCGATCCAAGGCCGCC ACAAATCCTAAGGAGCGCCG
Downstream 100 bases:
>100_bases AGGACAAATCATGCCAGCAAAGCCGCTTGCGCCAAGTAAACGTTGGTTTGATCTGATTGTGGCTGGTTTGGGCTTGCTGC TGCTTAGTCCATTGCTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MITVTRERQLRRPISELWQLLANPHNLPRILPRIARVEVSELANDRQPVTAYFDFGIPLGTQAAQGTFSLIEQQSIRFDA EQPLPIMAHWQLQPHANNTKVHASLSFDLKPILGPVAKVVPMSIVKSEVSRELEQALARIERLRLS
Sequences:
>Translated_146_residues MITVTRERQLRRPISELWQLLANPHNLPRILPRIARVEVSELANDRQPVTAYFDFGIPLGTQAAQGTFSLIEQQSIRFDA EQPLPIMAHWQLQPHANNTKVHASLSFDLKPILGPVAKVVPMSIVKSEVSRELEQALARIERLRLS >Mature_146_residues MITVTRERQLRRPISELWQLLANPHNLPRILPRIARVEVSELANDRQPVTAYFDFGIPLGTQAAQGTFSLIEQQSIRFDA EQPLPIMAHWQLQPHANNTKVHASLSFDLKPILGPVAKVVPMSIVKSEVSRELEQALARIERLRLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16574; Mature: 16574
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITVTRERQLRRPISELWQLLANPHNLPRILPRIARVEVSELANDRQPVTAYFDFGIPLG CEECCHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC TQAAQGTFSLIEQQSIRFDAEQPLPIMAHWQLQPHANNTKVHASLSFDLKPILGPVAKVV CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHH PMSIVKSEVSRELEQALARIERLRLS HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MITVTRERQLRRPISELWQLLANPHNLPRILPRIARVEVSELANDRQPVTAYFDFGIPLG CEECCHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC TQAAQGTFSLIEQQSIRFDAEQPLPIMAHWQLQPHANNTKVHASLSFDLKPILGPVAKVV CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHH PMSIVKSEVSRELEQALARIERLRLS HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA