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The map label for this gene is 159900378

Identifier: 159900378

GI number: 159900378

Start: 4851134

End: 4851898

Strand: Reverse

Name: 159900378

Synonym: Haur_3863

Alternate gene names: NA

Gene position: 4851898-4851134 (Counterclockwise)

Preceding gene: 159900379

Following gene: 159900377

Centisome position: 76.45

GC content: 49.67

Gene sequence:

>765_bases
ATGACAACGGATCTGTTGCAGGCTGCCCGCCAGGCATTGCAAGAACACAATTATCCCTTAGCACAACAACACTTAATTCC
GCTTGTGCGGGCTAATCCTAGTAATGGTGAAGCATGGTGGCATTTAGCCCAAACCTTTGATGACCCTCAAAAACGCCAAG
ATTGCCTTGATCGTGCGCAACGTCATGGCTACTCACCGCCAGTAGCGATAGCTGAACCTGAAATTATTTTGCCATGGGAA
CAAGCCGATGCTTGGAATAGCCCTATGCCAATGACCAATCCCTCACCATCGTTTGCGCCACCACCGCCGAGCAGTGCTGT
GGCTGCCAATCCGCGCCAGCCCGCGCCAAGTGCTGCCCATCAATTACCAACCGCACCACCGTACCCAACGCTTAAACCAG
CCGATCTGCGCCAAATTGTTAGTATTCTGAAAAGCCCTGTATCACGAGATCAGCAAATTCAGTCGGTTATGGGCATGTTT
CATTGCTCTGCTGAGCATGCTGATACGCTCTTGCAAGGGGTTGCTTACCACTACCCTGAGCAGTTTAAGAGCCCAGTTAA
GCGCAACCTCTATAGAATCTCGGTGGAAGTGGCTAGCGTTCTTTTAGGTGTGATTTTGACGCTGATTGCGACCTTTTTGA
TTTTCGATCCAGACCGAACGAATAGCCTTAGATGGCCGGTTCGCCTGCTTTTAGTTGGCATCTTTATTACGCTAACCGCA
TCCTATCGCGTATTTAAGCTGATGTATAACACTCCTGAACACTAG

Upstream 100 bases:

>100_bases
CCATCCACGATTCGATCAGCTTTGATCAGGCTGAATGGCAATCGCGCTTTGGCCAATATCGCAATAGCTAGCTGTTATTT
TATGATTGAGAGAGTGTCCT

Downstream 100 bases:

>100_bases
TCGTGGCACAGCATTTGCTTTTATACAATTGTGTAAAAGACAGATAGTTGTAGCGATAACAAAGGAGTTAGCAATGAGTA
ATTTAGGCGAACGAATCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MTTDLLQAARQALQEHNYPLAQQHLIPLVRANPSNGEAWWHLAQTFDDPQKRQDCLDRAQRHGYSPPVAIAEPEIILPWE
QADAWNSPMPMTNPSPSFAPPPPSSAVAANPRQPAPSAAHQLPTAPPYPTLKPADLRQIVSILKSPVSRDQQIQSVMGMF
HCSAEHADTLLQGVAYHYPEQFKSPVKRNLYRISVEVASVLLGVILTLIATFLIFDPDRTNSLRWPVRLLLVGIFITLTA
SYRVFKLMYNTPEH

Sequences:

>Translated_254_residues
MTTDLLQAARQALQEHNYPLAQQHLIPLVRANPSNGEAWWHLAQTFDDPQKRQDCLDRAQRHGYSPPVAIAEPEIILPWE
QADAWNSPMPMTNPSPSFAPPPPSSAVAANPRQPAPSAAHQLPTAPPYPTLKPADLRQIVSILKSPVSRDQQIQSVMGMF
HCSAEHADTLLQGVAYHYPEQFKSPVKRNLYRISVEVASVLLGVILTLIATFLIFDPDRTNSLRWPVRLLLVGIFITLTA
SYRVFKLMYNTPEH
>Mature_253_residues
TTDLLQAARQALQEHNYPLAQQHLIPLVRANPSNGEAWWHLAQTFDDPQKRQDCLDRAQRHGYSPPVAIAEPEIILPWEQ
ADAWNSPMPMTNPSPSFAPPPPSSAVAANPRQPAPSAAHQLPTAPPYPTLKPADLRQIVSILKSPVSRDQQIQSVMGMFH
CSAEHADTLLQGVAYHYPEQFKSPVKRNLYRISVEVASVLLGVILTLIATFLIFDPDRTNSLRWPVRLLLVGIFITLTAS
YRVFKLMYNTPEH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28447; Mature: 28316

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCC
>Mature Secondary Structure 
TTDLLQAARQALQEHNYPLAQQHLIPLVRANPSNGEAWWHLAQTFDDPQKRQDCLDRAQ
CHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
RHGYSPPVAIAEPEIILPWEQADAWNSPMPMTNPSPSFAPPPPSSAVAANPRQPAPSAAH
HCCCCCCCEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
QLPTAPPYPTLKPADLRQIVSILKSPVSRDQQIQSVMGMFHCSAEHADTLLQGVAYHYPE
CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCH
QFKSPVKRNLYRISVEVASVLLGVILTLIATFLIFDPDRTNSLRWPVRLLLVGIFITLTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
SYRVFKLMYNTPEH
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA