Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900379

Identifier: 159900379

GI number: 159900379

Start: 4851928

End: 4852335

Strand: Reverse

Name: 159900379

Synonym: Haur_3864

Alternate gene names: NA

Gene position: 4852335-4851928 (Counterclockwise)

Preceding gene: 159900380

Following gene: 159900378

Centisome position: 76.46

GC content: 49.26

Gene sequence:

>408_bases
ATGACTCAGCCGCAAACCACATATGACCCCGACAGCGATAGCCTGTTGTTGCGTTTGGCCTCTGGCGAGGAATGGGTGCA
GTTTGATTTAAATGAGTATGTGCAGGTCGAGACCGATCCCCAATTGCAGACCTGCTATGCCTTGACCTTGAATGATTATT
CGCTGCTGATTGCCCAAACCAAATATGGACAGCGCTTCTTTCCGCTTGATGGTTTGCAAACGCTCCACCAAGCGCAACAA
GAACGGTTGTTGGCTTTATTACTTAGCCACGACTTACAACCATTTTTAAGCGTTGCCGCCTTCACGCCTTCCTTGGTCGA
TACCATCCCGATGATCACCATCCACGATTCGATCAGCTTTGATCAGGCTGAATGGCAATCGCGCTTTGGCCAATATCGCA
ATAGCTAG

Upstream 100 bases:

>100_bases
AACCATGGGCTTGTGTCATTAACGAGCGTTGCTATGCTACAATGGCGTTTATTCCAGCCCCATTTTGTTGATTGCGCTTT
TGCGTAGGTGAAGGTGTGTT

Downstream 100 bases:

>100_bases
CTGTTATTTTATGATTGAGAGAGTGTCCTATGACAACGGATCTGTTGCAGGCTGCCCGCCAGGCATTGCAAGAACACAAT
TATCCCTTAGCACAACAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTQPQTTYDPDSDSLLLRLASGEEWVQFDLNEYVQVETDPQLQTCYALTLNDYSLLIAQTKYGQRFFPLDGLQTLHQAQQ
ERLLALLLSHDLQPFLSVAAFTPSLVDTIPMITIHDSISFDQAEWQSRFGQYRNS

Sequences:

>Translated_135_residues
MTQPQTTYDPDSDSLLLRLASGEEWVQFDLNEYVQVETDPQLQTCYALTLNDYSLLIAQTKYGQRFFPLDGLQTLHQAQQ
ERLLALLLSHDLQPFLSVAAFTPSLVDTIPMITIHDSISFDQAEWQSRFGQYRNS
>Mature_134_residues
TQPQTTYDPDSDSLLLRLASGEEWVQFDLNEYVQVETDPQLQTCYALTLNDYSLLIAQTKYGQRFFPLDGLQTLHQAQQE
RLLALLLSHDLQPFLSVAAFTPSLVDTIPMITIHDSISFDQAEWQSRFGQYRNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15504; Mature: 15372

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPQTTYDPDSDSLLLRLASGEEWVQFDLNEYVQVETDPQLQTCYALTLNDYSLLIAQT
CCCCCCCCCCCCCCEEEEECCCCCEEEECCCCEEEECCCCCCEEEEEEEECCEEEEEEEC
KYGQRFFPLDGLQTLHQAQQERLLALLLSHDLQPFLSVAAFTPSLVDTIPMITIHDSISF
CCCCEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHCCEEEEECCCCC
DQAEWQSRFGQYRNS
CHHHHHHHHHHCCCC
>Mature Secondary Structure 
TQPQTTYDPDSDSLLLRLASGEEWVQFDLNEYVQVETDPQLQTCYALTLNDYSLLIAQT
CCCCCCCCCCCCCEEEEECCCCCEEEECCCCEEEECCCCCCEEEEEEEECCEEEEEEEC
KYGQRFFPLDGLQTLHQAQQERLLALLLSHDLQPFLSVAAFTPSLVDTIPMITIHDSISF
CCCCEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHCCEEEEECCCCC
DQAEWQSRFGQYRNS
CHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA