| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900379
Identifier: 159900379
GI number: 159900379
Start: 4851928
End: 4852335
Strand: Reverse
Name: 159900379
Synonym: Haur_3864
Alternate gene names: NA
Gene position: 4852335-4851928 (Counterclockwise)
Preceding gene: 159900380
Following gene: 159900378
Centisome position: 76.46
GC content: 49.26
Gene sequence:
>408_bases ATGACTCAGCCGCAAACCACATATGACCCCGACAGCGATAGCCTGTTGTTGCGTTTGGCCTCTGGCGAGGAATGGGTGCA GTTTGATTTAAATGAGTATGTGCAGGTCGAGACCGATCCCCAATTGCAGACCTGCTATGCCTTGACCTTGAATGATTATT CGCTGCTGATTGCCCAAACCAAATATGGACAGCGCTTCTTTCCGCTTGATGGTTTGCAAACGCTCCACCAAGCGCAACAA GAACGGTTGTTGGCTTTATTACTTAGCCACGACTTACAACCATTTTTAAGCGTTGCCGCCTTCACGCCTTCCTTGGTCGA TACCATCCCGATGATCACCATCCACGATTCGATCAGCTTTGATCAGGCTGAATGGCAATCGCGCTTTGGCCAATATCGCA ATAGCTAG
Upstream 100 bases:
>100_bases AACCATGGGCTTGTGTCATTAACGAGCGTTGCTATGCTACAATGGCGTTTATTCCAGCCCCATTTTGTTGATTGCGCTTT TGCGTAGGTGAAGGTGTGTT
Downstream 100 bases:
>100_bases CTGTTATTTTATGATTGAGAGAGTGTCCTATGACAACGGATCTGTTGCAGGCTGCCCGCCAGGCATTGCAAGAACACAAT TATCCCTTAGCACAACAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTQPQTTYDPDSDSLLLRLASGEEWVQFDLNEYVQVETDPQLQTCYALTLNDYSLLIAQTKYGQRFFPLDGLQTLHQAQQ ERLLALLLSHDLQPFLSVAAFTPSLVDTIPMITIHDSISFDQAEWQSRFGQYRNS
Sequences:
>Translated_135_residues MTQPQTTYDPDSDSLLLRLASGEEWVQFDLNEYVQVETDPQLQTCYALTLNDYSLLIAQTKYGQRFFPLDGLQTLHQAQQ ERLLALLLSHDLQPFLSVAAFTPSLVDTIPMITIHDSISFDQAEWQSRFGQYRNS >Mature_134_residues TQPQTTYDPDSDSLLLRLASGEEWVQFDLNEYVQVETDPQLQTCYALTLNDYSLLIAQTKYGQRFFPLDGLQTLHQAQQE RLLALLLSHDLQPFLSVAAFTPSLVDTIPMITIHDSISFDQAEWQSRFGQYRNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15504; Mature: 15372
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPQTTYDPDSDSLLLRLASGEEWVQFDLNEYVQVETDPQLQTCYALTLNDYSLLIAQT CCCCCCCCCCCCCCEEEEECCCCCEEEECCCCEEEECCCCCCEEEEEEEECCEEEEEEEC KYGQRFFPLDGLQTLHQAQQERLLALLLSHDLQPFLSVAAFTPSLVDTIPMITIHDSISF CCCCEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHCCEEEEECCCCC DQAEWQSRFGQYRNS CHHHHHHHHHHCCCC >Mature Secondary Structure TQPQTTYDPDSDSLLLRLASGEEWVQFDLNEYVQVETDPQLQTCYALTLNDYSLLIAQT CCCCCCCCCCCCCEEEEECCCCCEEEECCCCEEEECCCCCCEEEEEEEECCEEEEEEEC KYGQRFFPLDGLQTLHQAQQERLLALLLSHDLQPFLSVAAFTPSLVDTIPMITIHDSISF CCCCEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHCCEEEEECCCCC DQAEWQSRFGQYRNS CHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA