| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900357
Identifier: 159900357
GI number: 159900357
Start: 4821067
End: 4821393
Strand: Reverse
Name: 159900357
Synonym: Haur_3840
Alternate gene names: NA
Gene position: 4821393-4821067 (Counterclockwise)
Preceding gene: 159900358
Following gene: 159900356
Centisome position: 75.97
GC content: 48.62
Gene sequence:
>327_bases ATGCCAAAGCGTCCACCACTCCCCGAAGCCGTCCGCGATCTCGCGCTTTATCAATTTAGTTCAAGCAATGCTGAGCGCAC AACACGAGGCAGACACATTATCACCGCAGCCACCGATTTGGAATATCGTTGGGGCTTCGATCCTGAGAGCACAGCCGAAA ATCCAATCTATTTGGTCAAAGTCCAGATTCAGCATTGGGATATTATTCAGCCAGAAATTTATATGGTTAGCCTTGTTGAT CAAGCTTTTGAAATCAGCGAAATCAAACTAGGCGATCGCAAAGTCGCCTGGAGCCATTGGCGGGTTGTGCCAAGCAGGCT GAGCTAA
Upstream 100 bases:
>100_bases AAGCGTCTAGCCTCGGTTGCCATGTTTCGCGACCGAGGCTAATGTTTTTAATGATCACGCTTGCTATACTCAAAGCATCT TGCCAACCAAGGAGCTAAGC
Downstream 100 bases:
>100_bases AACAAACTGTATCTTGCAATATTCTAATTTTATTGATATAAATGCATATAATCTAGAATAGTAGAATATTGCAAGAGGTA GGATACATGGCTAACTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MPKRPPLPEAVRDLALYQFSSSNAERTTRGRHIITAATDLEYRWGFDPESTAENPIYLVKVQIQHWDIIQPEIYMVSLVD QAFEISEIKLGDRKVAWSHWRVVPSRLS
Sequences:
>Translated_108_residues MPKRPPLPEAVRDLALYQFSSSNAERTTRGRHIITAATDLEYRWGFDPESTAENPIYLVKVQIQHWDIIQPEIYMVSLVD QAFEISEIKLGDRKVAWSHWRVVPSRLS >Mature_107_residues PKRPPLPEAVRDLALYQFSSSNAERTTRGRHIITAATDLEYRWGFDPESTAENPIYLVKVQIQHWDIIQPEIYMVSLVDQ AFEISEIKLGDRKVAWSHWRVVPSRLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12564; Mature: 12433
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRPPLPEAVRDLALYQFSSSNAERTTRGRHIITAATDLEYRWGFDPESTAENPIYLVK CCCCCCCHHHHHHHHHEEECCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEE VQIQHWDIIQPEIYMVSLVDQAFEISEIKLGDRKVAWSHWRVVPSRLS EEECCCCCCCCCEEEEEEHHHHHCCEEEEECCEEEEEEEEEEECCCCC >Mature Secondary Structure PKRPPLPEAVRDLALYQFSSSNAERTTRGRHIITAATDLEYRWGFDPESTAENPIYLVK CCCCCCHHHHHHHHHEEECCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEE VQIQHWDIIQPEIYMVSLVDQAFEISEIKLGDRKVAWSHWRVVPSRLS EEECCCCCCCCCEEEEEEHHHHHCCEEEEECCEEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA