Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159900357

Identifier: 159900357

GI number: 159900357

Start: 4821067

End: 4821393

Strand: Reverse

Name: 159900357

Synonym: Haur_3840

Alternate gene names: NA

Gene position: 4821393-4821067 (Counterclockwise)

Preceding gene: 159900358

Following gene: 159900356

Centisome position: 75.97

GC content: 48.62

Gene sequence:

>327_bases
ATGCCAAAGCGTCCACCACTCCCCGAAGCCGTCCGCGATCTCGCGCTTTATCAATTTAGTTCAAGCAATGCTGAGCGCAC
AACACGAGGCAGACACATTATCACCGCAGCCACCGATTTGGAATATCGTTGGGGCTTCGATCCTGAGAGCACAGCCGAAA
ATCCAATCTATTTGGTCAAAGTCCAGATTCAGCATTGGGATATTATTCAGCCAGAAATTTATATGGTTAGCCTTGTTGAT
CAAGCTTTTGAAATCAGCGAAATCAAACTAGGCGATCGCAAAGTCGCCTGGAGCCATTGGCGGGTTGTGCCAAGCAGGCT
GAGCTAA

Upstream 100 bases:

>100_bases
AAGCGTCTAGCCTCGGTTGCCATGTTTCGCGACCGAGGCTAATGTTTTTAATGATCACGCTTGCTATACTCAAAGCATCT
TGCCAACCAAGGAGCTAAGC

Downstream 100 bases:

>100_bases
AACAAACTGTATCTTGCAATATTCTAATTTTATTGATATAAATGCATATAATCTAGAATAGTAGAATATTGCAAGAGGTA
GGATACATGGCTAACTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MPKRPPLPEAVRDLALYQFSSSNAERTTRGRHIITAATDLEYRWGFDPESTAENPIYLVKVQIQHWDIIQPEIYMVSLVD
QAFEISEIKLGDRKVAWSHWRVVPSRLS

Sequences:

>Translated_108_residues
MPKRPPLPEAVRDLALYQFSSSNAERTTRGRHIITAATDLEYRWGFDPESTAENPIYLVKVQIQHWDIIQPEIYMVSLVD
QAFEISEIKLGDRKVAWSHWRVVPSRLS
>Mature_107_residues
PKRPPLPEAVRDLALYQFSSSNAERTTRGRHIITAATDLEYRWGFDPESTAENPIYLVKVQIQHWDIIQPEIYMVSLVDQ
AFEISEIKLGDRKVAWSHWRVVPSRLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12564; Mature: 12433

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKRPPLPEAVRDLALYQFSSSNAERTTRGRHIITAATDLEYRWGFDPESTAENPIYLVK
CCCCCCCHHHHHHHHHEEECCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEE
VQIQHWDIIQPEIYMVSLVDQAFEISEIKLGDRKVAWSHWRVVPSRLS
EEECCCCCCCCCEEEEEEHHHHHCCEEEEECCEEEEEEEEEEECCCCC
>Mature Secondary Structure 
PKRPPLPEAVRDLALYQFSSSNAERTTRGRHIITAATDLEYRWGFDPESTAENPIYLVK
CCCCCCHHHHHHHHHEEECCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEE
VQIQHWDIIQPEIYMVSLVDQAFEISEIKLGDRKVAWSHWRVVPSRLS
EEECCCCCCCCCEEEEEEHHHHHCCEEEEECCEEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA