| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900356
Identifier: 159900356
GI number: 159900356
Start: 4819772
End: 4820980
Strand: Reverse
Name: 159900356
Synonym: Haur_3839
Alternate gene names: NA
Gene position: 4820980-4819772 (Counterclockwise)
Preceding gene: 159900357
Following gene: 159900355
Centisome position: 75.96
GC content: 50.95
Gene sequence:
>1209_bases ATGGCTAACTGGTTTTGGGTGTTCATGTTAATGATCATGTTGGTTGGATGTGGCAGTGCGAGTGTTCAACCAACGGCTGT GCCAAGTGCAGCGGTGGCGACTGCGACCACTACAACAATTAGCAATCCTCAAACTTCCGCGCAAATGCTGGAGTTTATAC GCCAACATGCCGCCAATACGTCGATGGTCAGCTATAGCACCAACAGCGATGGCAGCATCAACCAAGCTGATCCGGTGATT CAATTCAATGCTGAAATGCCATTGCCACTTGCCTCGACCATGAAGATTGTGGTCTTGGCAAGCTATGCCCAAGCAGTCGA GGCGGGCACGCTTGATCCCGAAGAACCGATTGCTTTGGCCGATTGGGAGCTGTGGTATTGGCCGAATACTGATGGTGGCG CACATCCGGCGGCATTAAAACGGCTTGAAATTCCTGCCGATCAACGCGGCTTTGCCAATGACCCGCAAAAAACCGTGCCG CTCAAAACCCTTGCTCAAGCCATGATTTTCGAGAGCGATAACGCCGCCACCGATTATTTGATCGATCGCTTGGGCATGGC GGCGCTTGATCAAACGATCAAAACGCTAGGGATGCAGCAGCAAACCAAAATTCTGCCAATTATGGGGCTGTTTCTGTTGG TAATGAACCCCGATGCGCCAATCGATTCAAGCACCCTACCAACCTTATTGAAGTTGGATCAAGCCAGCATCGAGCAACAA GCCTTAGCACTAGCTGAGCGCTACAAAACAGAACCAGCATGGCGCGAAACTGTGCGCAATCAAGGCCAAATAACCCTAAG CTTGGCTGAACAAGGTCAGGTTTTCTCGCACATTATACCCAGAGGTAGCGCCAGCGATTATGCTAAAGTGATGGCATTGG TTGGCAATAATCAATTGATCAGCCCTGAAGTTTCGCAAACTATGCGCGAATATCTAGAATGGCCGATGACTATTGCTGGC AATGAAGCGATGTTCAAGCATTTTGGCACCAAGGGTGGTAGCCTGCCCGCAATGCTGACCGAAGCCATGTTTGTGCAGCC TGCGCAAGGCGAATGGGCTGATCGCACGCGGGTGGTCGTGCTCTTTTTCAATCAATTACCCGATGCCACATGGCTTGGCT TGCTCCAAACGTTTATGCAGCAGCAATTTGCCGTGCAAGTCGCGCTAGAACCCGCATTTGCTCAATCGGTCGCAAGCCAG CTAAAATAG
Upstream 100 bases:
>100_bases GCAGGCTGAGCTAAAACAAACTGTATCTTGCAATATTCTAATTTTATTGATATAAATGCATATAATCTAGAATAGTAGAA TATTGCAAGAGGTAGGATAC
Downstream 100 bases:
>100_bases GGCGATTTCAGCCAGAGGAACCAACTTCATGGATGCAGCCCAAGCCTTGCTCGACCGAATTGCCGCGTTGGAAGCCCGGG TCAGTGCCTTAGAAAGCCAA
Product: beta-lactamase class A-like protein
Products: NA
Alternate protein names: Beta-Lactamase Class A; Beta-Lactamase Class A-Like Protein
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MANWFWVFMLMIMLVGCGSASVQPTAVPSAAVATATTTTISNPQTSAQMLEFIRQHAANTSMVSYSTNSDGSINQADPVI QFNAEMPLPLASTMKIVVLASYAQAVEAGTLDPEEPIALADWELWYWPNTDGGAHPAALKRLEIPADQRGFANDPQKTVP LKTLAQAMIFESDNAATDYLIDRLGMAALDQTIKTLGMQQQTKILPIMGLFLLVMNPDAPIDSSTLPTLLKLDQASIEQQ ALALAERYKTEPAWRETVRNQGQITLSLAEQGQVFSHIIPRGSASDYAKVMALVGNNQLISPEVSQTMREYLEWPMTIAG NEAMFKHFGTKGGSLPAMLTEAMFVQPAQGEWADRTRVVVLFFNQLPDATWLGLLQTFMQQQFAVQVALEPAFAQSVASQ LK
Sequences:
>Translated_402_residues MANWFWVFMLMIMLVGCGSASVQPTAVPSAAVATATTTTISNPQTSAQMLEFIRQHAANTSMVSYSTNSDGSINQADPVI QFNAEMPLPLASTMKIVVLASYAQAVEAGTLDPEEPIALADWELWYWPNTDGGAHPAALKRLEIPADQRGFANDPQKTVP LKTLAQAMIFESDNAATDYLIDRLGMAALDQTIKTLGMQQQTKILPIMGLFLLVMNPDAPIDSSTLPTLLKLDQASIEQQ ALALAERYKTEPAWRETVRNQGQITLSLAEQGQVFSHIIPRGSASDYAKVMALVGNNQLISPEVSQTMREYLEWPMTIAG NEAMFKHFGTKGGSLPAMLTEAMFVQPAQGEWADRTRVVVLFFNQLPDATWLGLLQTFMQQQFAVQVALEPAFAQSVASQ LK >Mature_401_residues ANWFWVFMLMIMLVGCGSASVQPTAVPSAAVATATTTTISNPQTSAQMLEFIRQHAANTSMVSYSTNSDGSINQADPVIQ FNAEMPLPLASTMKIVVLASYAQAVEAGTLDPEEPIALADWELWYWPNTDGGAHPAALKRLEIPADQRGFANDPQKTVPL KTLAQAMIFESDNAATDYLIDRLGMAALDQTIKTLGMQQQTKILPIMGLFLLVMNPDAPIDSSTLPTLLKLDQASIEQQA LALAERYKTEPAWRETVRNQGQITLSLAEQGQVFSHIIPRGSASDYAKVMALVGNNQLISPEVSQTMREYLEWPMTIAGN EAMFKHFGTKGGSLPAMLTEAMFVQPAQGEWADRTRVVVLFFNQLPDATWLGLLQTFMQQQFAVQVALEPAFAQSVASQL K
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43959; Mature: 43828
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANWFWVFMLMIMLVGCGSASVQPTAVPSAAVATATTTTISNPQTSAQMLEFIRQHAANT CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHCCCC SMVSYSTNSDGSINQADPVIQFNAEMPLPLASTMKIVVLASYAQAVEAGTLDPEEPIALA CEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE DWELWYWPNTDGGAHPAALKRLEIPADQRGFANDPQKTVPLKTLAQAMIFESDNAATDYL CEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH IDRLGMAALDQTIKTLGMQQQTKILPIMGLFLLVMNPDAPIDSSTLPTLLKLDQASIEQQ HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHH ALALAERYKTEPAWRETVRNQGQITLSLAEQGQVFSHIIPRGSASDYAKVMALVGNNQLI HHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHCCCCEE SPEVSQTMREYLEWPMTIAGNEAMFKHFGTKGGSLPAMLTEAMFVQPAQGEWADRTRVVV CHHHHHHHHHHHHCCCEECCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEE LFFNQLPDATWLGLLQTFMQQQFAVQVALEPAFAQSVASQLK EEECCCCCHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHCC >Mature Secondary Structure ANWFWVFMLMIMLVGCGSASVQPTAVPSAAVATATTTTISNPQTSAQMLEFIRQHAANT CHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHCCCC SMVSYSTNSDGSINQADPVIQFNAEMPLPLASTMKIVVLASYAQAVEAGTLDPEEPIALA CEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE DWELWYWPNTDGGAHPAALKRLEIPADQRGFANDPQKTVPLKTLAQAMIFESDNAATDYL CEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH IDRLGMAALDQTIKTLGMQQQTKILPIMGLFLLVMNPDAPIDSSTLPTLLKLDQASIEQQ HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHH ALALAERYKTEPAWRETVRNQGQITLSLAEQGQVFSHIIPRGSASDYAKVMALVGNNQLI HHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHCCCCEE SPEVSQTMREYLEWPMTIAGNEAMFKHFGTKGGSLPAMLTEAMFVQPAQGEWADRTRVVV CHHHHHHHHHHHHCCCEECCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEE LFFNQLPDATWLGLLQTFMQQQFAVQVALEPAFAQSVASQLK EEECCCCCHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA