| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900342
Identifier: 159900342
GI number: 159900342
Start: 4800732
End: 4803611
Strand: Direct
Name: 159900342
Synonym: Haur_3825
Alternate gene names: NA
Gene position: 4800732-4803611 (Clockwise)
Preceding gene: 159900340
Following gene: 159900343
Centisome position: 75.64
GC content: 52.53
Gene sequence:
>2880_bases ATGCTCTGGTATAATGGCACGTTGTTGTCGATGAAACGATTTGAGGCTGGCTTGGTACAAGACTGGTGGCAACGCCGCGC TGCATGGTCGCTGCGTCAATGGATCATTACAATCGCAAGTGTGTTGCTGATGGCGCTATGCTTATTAACCGCGCTCTATC AGTTGCCGACTCATGTGCGGATCGCCAGCGACGGCTTGGGTGATCAGCCGTTTTTGGTTTCAAGCGAGGCACTAGGCCAA GCTGCCACCGATCTTGGCACGGTCTTCCCCGATGAACTCGACGCAACTGGCGGGCGGTTTCGCTGGACACGCGGCAGCAC CCAAATTCAGATTCCGGCACTCGGCGCACATAGCAGTTATAGGCTTGAGCTTGATGTAGTTGGCTGGCCCGACGATGTGC TACGCAGCGATGTACGCCAGCCATTTGTGCATGTGTTGGTCAATCAACAGCTGATCGCCGTATTTGAGGCCAGCAGCCAA CGCACCATCTATCAATTAAATACTCCAGCACTCAATCAAAGCAACCTTGAGCTTGAATTACGCCTGAGCCACGACCCACA GCAGCTTGCCCCCTTGGATAATACTGCCACCTTCACTGGCACGACGCTCTATCCCAACGACCGCCGCCCCCATGGTTTGC GCTTGTATGGCCTTAGCGCCACGACCAACACTGTAGGCTTTAATTTGCCTGCCTGGAGCTTGATTTGGCGTGTAGCAGTG GCCTTGGGCTTGATCCTCCTGGCTGGTTGGCTCTATCCGCGTGAGCGTTTGCCATTGTTTTTGCTTGGGTTGCTCTTGGT CGTTTTTTGGCTGACCCTGGGCTATCTTGCCCGCCACTGGCTGTTGCCATCGTTTGAGTTGGTGCTGTTGGGGCTTGGTT TTGTGGTGGTTTGGAATTGGCAACGCCAGATTATTGATACCTGGTTGCATTTCCGCCAGCGCTTGTTGCAAGGCCAAAAT CTTGATTATGGTTTAGCTGTGGCTGCACTGATTGGCCTGCTGGCTATCAGTTGGCCCAGCCTTAGCCAAGCCGCCAACGA ATGGCTACCCAAAGCCAAAAAGCTCGATCCTGGGGCGATTATTGTGGTTTCGTTGGCAGTAGCTAGCTTGTTTATTGCAG GCTTCTACTGGGGCGATCTCAATCGGTTGCTCGATCGGCTCAATCGGCGTTTGCGCACCCGCCAAGGCTTGGGCTGGGCC TTGCTAGGCTTAGTGGTTGGGGTTTGGTTAGTCTATAGCTGGGGCGTAATTCGCCAAATTAACTACCTTGGCAACGCCGA TTACTCCGATAACGGTGTAGTTGCCCGCAACTTGGTGGCGGGGCGTGGCTGGGTCGTTGATTATGTCACCCAATTTTTCA AACTGTATCCCGATGGCAGCGTGACCCGCGTGCAAGAAACCTGGCCAATGTTGCAGCCAGTCTGGATTGCGCCATTCTTT GCCTTGTTTGGGCCAGAACCGTGGGCCGCCAAAATCCCCAACCTGATCTTTTTTAGTTTGCTGTCGATCGTGGTCTATCG TATTGCCCGTCAGTTGTGGGATCAACGGGTTGGTTTGATTGCGGTGCTGTTGGTGCTGATCAATCGACATATGTTCCGCT TGATGATCTATAGCACCTCGGATTTGGCGTTTGTGCTGTTCTACACAGCGGCGATTTGGTTGCTCTGGCGTAGTTTGGTA ACTCATAGCAAAGAGCGCTTGCTTGGCTCAGGCCTGATCATCGGCCTCATGTGTTGGCAAAAAACCAGCGCCGTAATTGT AGCGATTGGCATGGGCTTGTGGCTGATTTGGCGTTTGTGGCAGGTCGAAGATCGCTGGAAAGCCTATCGCACTGCTGCTT TGTGGTGGGTACTCCCAGCGGTTTTGGTGTTCTCACCTTATATTGCCCGCAACCTGCACGAATTTGGCAAACCCGCCTTT TCGACCGAAAGTTATGATGCTTGGATCATCGGCTACACAAATTTCGATTCGATCTACAATATCTACACCAACGAGCAAGG CTTGCCCGGGAGCAACGGCTTACCTGAACCAAGCTGGATTCTGCGTTGGGGCTATCAAAAGACCTTTGATAAAATTGGTA ACCAATTTGAAGCGACTCGCAACTATTTGTTGCCAGCTAGCCCAGCTTTGGGCATGTTCAGCGGTCGCGGCAATTTGATG GGCAATAACGATCAGGGCGTTAATGGTCAGCCCTATGTGTGGTTGATGTTGGGTGCGTGGCTAAGCTTAATTGGTTTGAT TGCTGCTCGCCGCCAACAAGCCAGCTTGATCGCCTTGGTTGGAGCGAGTTTCACACCATATATTATCTTCTTGGCGCTCT ATTGGCACGCTGATGAAGAACGCTATTTTGTGCCATTAGTGCCATTTTTGGCCTTACTGGCGGCTGGGGCGTTGGTGGCA ATTCACGATGCAATTGCTCGTTGCTGGAACCAGCGTGGTCGTCCGTTGGCCTTGTTGGTAGCGGCTCAATTGCTGGTCTT GGCGCTCACCCCGGGGTGGGTTGAGGCCGCTAACAAAAGTGCTACCGTCGCAGGCAGCGAGTATGCCGAATGGCAACCCG ATTTGCAGGCCTTTGAATGGTTGCGCCAAAACACACCACCAGAGGCGGTGGTTATGACCCGCGTGCCATGGCAACTCAAT TTTCATGCTGAACGCGCTGCTGTGATGAACCCAAATGTGGCCGATTTAGCCGTGATTAAACAGGTTGCTGACTATTACAA GGCCTCGTTTATTCTGGTCAATGCTGTGCAAAACAACAAAGATCAAGCTCAAATTGGCTTAGGCCGCTTGCTCAAAGGCG AGGAGCTACCTGGGTTTGTGCTACGAGCCAGCTTTGCGGGGCCGAAAAACCGCACAGTCTATATCTACGAAATTCAATAA
Upstream 100 bases:
>100_bases CTGAGTGTGAGGATCGATAGCGAAATAGTTATCTCGGTTATCCGATTCGTCCAATCAATCGGTTGATCGTAATGCCAAAT TGCAAAAAAGCGCCGATGCG
Downstream 100 bases:
>100_bases ATACAGTTTGCTGGAGCCAAAACTGTAGCTGCAATGTTCCAACGACTCCAAACTGATTGATCATCATACACGGCTATTGC ATGTTGATAGCCTATGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 959; Mature: 959
Protein sequence:
>959_residues MLWYNGTLLSMKRFEAGLVQDWWQRRAAWSLRQWIITIASVLLMALCLLTALYQLPTHVRIASDGLGDQPFLVSSEALGQ AATDLGTVFPDELDATGGRFRWTRGSTQIQIPALGAHSSYRLELDVVGWPDDVLRSDVRQPFVHVLVNQQLIAVFEASSQ RTIYQLNTPALNQSNLELELRLSHDPQQLAPLDNTATFTGTTLYPNDRRPHGLRLYGLSATTNTVGFNLPAWSLIWRVAV ALGLILLAGWLYPRERLPLFLLGLLLVVFWLTLGYLARHWLLPSFELVLLGLGFVVVWNWQRQIIDTWLHFRQRLLQGQN LDYGLAVAALIGLLAISWPSLSQAANEWLPKAKKLDPGAIIVVSLAVASLFIAGFYWGDLNRLLDRLNRRLRTRQGLGWA LLGLVVGVWLVYSWGVIRQINYLGNADYSDNGVVARNLVAGRGWVVDYVTQFFKLYPDGSVTRVQETWPMLQPVWIAPFF ALFGPEPWAAKIPNLIFFSLLSIVVYRIARQLWDQRVGLIAVLLVLINRHMFRLMIYSTSDLAFVLFYTAAIWLLWRSLV THSKERLLGSGLIIGLMCWQKTSAVIVAIGMGLWLIWRLWQVEDRWKAYRTAALWWVLPAVLVFSPYIARNLHEFGKPAF STESYDAWIIGYTNFDSIYNIYTNEQGLPGSNGLPEPSWILRWGYQKTFDKIGNQFEATRNYLLPASPALGMFSGRGNLM GNNDQGVNGQPYVWLMLGAWLSLIGLIAARRQQASLIALVGASFTPYIIFLALYWHADEERYFVPLVPFLALLAAGALVA IHDAIARCWNQRGRPLALLVAAQLLVLALTPGWVEAANKSATVAGSEYAEWQPDLQAFEWLRQNTPPEAVVMTRVPWQLN FHAERAAVMNPNVADLAVIKQVADYYKASFILVNAVQNNKDQAQIGLGRLLKGEELPGFVLRASFAGPKNRTVYIYEIQ
Sequences:
>Translated_959_residues MLWYNGTLLSMKRFEAGLVQDWWQRRAAWSLRQWIITIASVLLMALCLLTALYQLPTHVRIASDGLGDQPFLVSSEALGQ AATDLGTVFPDELDATGGRFRWTRGSTQIQIPALGAHSSYRLELDVVGWPDDVLRSDVRQPFVHVLVNQQLIAVFEASSQ RTIYQLNTPALNQSNLELELRLSHDPQQLAPLDNTATFTGTTLYPNDRRPHGLRLYGLSATTNTVGFNLPAWSLIWRVAV ALGLILLAGWLYPRERLPLFLLGLLLVVFWLTLGYLARHWLLPSFELVLLGLGFVVVWNWQRQIIDTWLHFRQRLLQGQN LDYGLAVAALIGLLAISWPSLSQAANEWLPKAKKLDPGAIIVVSLAVASLFIAGFYWGDLNRLLDRLNRRLRTRQGLGWA LLGLVVGVWLVYSWGVIRQINYLGNADYSDNGVVARNLVAGRGWVVDYVTQFFKLYPDGSVTRVQETWPMLQPVWIAPFF ALFGPEPWAAKIPNLIFFSLLSIVVYRIARQLWDQRVGLIAVLLVLINRHMFRLMIYSTSDLAFVLFYTAAIWLLWRSLV THSKERLLGSGLIIGLMCWQKTSAVIVAIGMGLWLIWRLWQVEDRWKAYRTAALWWVLPAVLVFSPYIARNLHEFGKPAF STESYDAWIIGYTNFDSIYNIYTNEQGLPGSNGLPEPSWILRWGYQKTFDKIGNQFEATRNYLLPASPALGMFSGRGNLM GNNDQGVNGQPYVWLMLGAWLSLIGLIAARRQQASLIALVGASFTPYIIFLALYWHADEERYFVPLVPFLALLAAGALVA IHDAIARCWNQRGRPLALLVAAQLLVLALTPGWVEAANKSATVAGSEYAEWQPDLQAFEWLRQNTPPEAVVMTRVPWQLN FHAERAAVMNPNVADLAVIKQVADYYKASFILVNAVQNNKDQAQIGLGRLLKGEELPGFVLRASFAGPKNRTVYIYEIQ >Mature_959_residues MLWYNGTLLSMKRFEAGLVQDWWQRRAAWSLRQWIITIASVLLMALCLLTALYQLPTHVRIASDGLGDQPFLVSSEALGQ AATDLGTVFPDELDATGGRFRWTRGSTQIQIPALGAHSSYRLELDVVGWPDDVLRSDVRQPFVHVLVNQQLIAVFEASSQ RTIYQLNTPALNQSNLELELRLSHDPQQLAPLDNTATFTGTTLYPNDRRPHGLRLYGLSATTNTVGFNLPAWSLIWRVAV ALGLILLAGWLYPRERLPLFLLGLLLVVFWLTLGYLARHWLLPSFELVLLGLGFVVVWNWQRQIIDTWLHFRQRLLQGQN LDYGLAVAALIGLLAISWPSLSQAANEWLPKAKKLDPGAIIVVSLAVASLFIAGFYWGDLNRLLDRLNRRLRTRQGLGWA LLGLVVGVWLVYSWGVIRQINYLGNADYSDNGVVARNLVAGRGWVVDYVTQFFKLYPDGSVTRVQETWPMLQPVWIAPFF ALFGPEPWAAKIPNLIFFSLLSIVVYRIARQLWDQRVGLIAVLLVLINRHMFRLMIYSTSDLAFVLFYTAAIWLLWRSLV THSKERLLGSGLIIGLMCWQKTSAVIVAIGMGLWLIWRLWQVEDRWKAYRTAALWWVLPAVLVFSPYIARNLHEFGKPAF STESYDAWIIGYTNFDSIYNIYTNEQGLPGSNGLPEPSWILRWGYQKTFDKIGNQFEATRNYLLPASPALGMFSGRGNLM GNNDQGVNGQPYVWLMLGAWLSLIGLIAARRQQASLIALVGASFTPYIIFLALYWHADEERYFVPLVPFLALLAAGALVA IHDAIARCWNQRGRPLALLVAAQLLVLALTPGWVEAANKSATVAGSEYAEWQPDLQAFEWLRQNTPPEAVVMTRVPWQLN FHAERAAVMNPNVADLAVIKQVADYYKASFILVNAVQNNKDQAQIGLGRLLKGEELPGFVLRASFAGPKNRTVYIYEIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 108213; Mature: 108213
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWYNGTLLSMKRFEAGLVQDWWQRRAAWSLRQWIITIASVLLMALCLLTALYQLPTHVR CEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE IASDGLGDQPFLVSSEALGQAATDLGTVFPDELDATGGRFRWTRGSTQIQIPALGAHSSY EECCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCE RLELDVVGWPDDVLRSDVRQPFVHVLVNQQLIAVFEASSQRTIYQLNTPALNQSNLELEL EEEEEEECCCHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCEEEEECCCCCCCCCCEEEE RLSHDPQQLAPLDNTATFTGTTLYPNDRRPHGLRLYGLSATTNTVGFNLPAWSLIWRVAV EECCCHHHHCCCCCCCEEECEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH ALGLILLAGWLYPRERLPLFLLGLLLVVFWLTLGYLARHWLLPSFELVLLGLGFVVVWNW HHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECH QRQIIDTWLHFRQRLLQGQNLDYGLAVAALIGLLAISWPSLSQAANEWLPKAKKLDPGAI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHH IVVSLAVASLFIAGFYWGDLNRLLDRLNRRLRTRQGLGWALLGLVVGVWLVYSWGVIRQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH NYLGNADYSDNGVVARNLVAGRGWVVDYVTQFFKLYPDGSVTRVQETWPMLQPVWIAPFF HHHCCCCCCCCCCEEHHHHCCCCHHHHHHHHHHHHCCCCCCEEHHHHCCCCCHHHHHHHH ALFGPEPWAAKIPNLIFFSLLSIVVYRIARQLWDQRVGLIAVLLVLINRHMFRLMIYSTS HHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC DLAFVLFYTAAIWLLWRSLVTHSKERLLGSGLIIGLMCWQKTSAVIVAIGMGLWLIWRLW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHH QVEDRWKAYRTAALWWVLPAVLVFSPYIARNLHEFGKPAFSTESYDAWIIGYTNFDSIYN HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHEE IYTNEQGLPGSNGLPEPSWILRWGYQKTFDKIGNQFEATRNYLLPASPALGMFSGRGNLM EECCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCC GNNDQGVNGQPYVWLMLGAWLSLIGLIAARRQQASLIALVGASFTPYIIFLALYWHADEE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCC RYFVPLVPFLALLAAGALVAIHDAIARCWNQRGRPLALLVAAQLLVLALTPGWVEAANKS CEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCC ATVAGSEYAEWQPDLQAFEWLRQNTPPEAVVMTRVPWQLNFHAERAAVMNPNVADLAVIK CEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCEECCCCHHHHHHHH QVADYYKASFILVNAVQNNKDQAQIGLGRLLKGEELPGFVLRASFAGPKNRTVYIYEIQ HHHHHHHHHEEEEEEHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEC >Mature Secondary Structure MLWYNGTLLSMKRFEAGLVQDWWQRRAAWSLRQWIITIASVLLMALCLLTALYQLPTHVR CEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE IASDGLGDQPFLVSSEALGQAATDLGTVFPDELDATGGRFRWTRGSTQIQIPALGAHSSY EECCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCE RLELDVVGWPDDVLRSDVRQPFVHVLVNQQLIAVFEASSQRTIYQLNTPALNQSNLELEL EEEEEEECCCHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCEEEEECCCCCCCCCCEEEE RLSHDPQQLAPLDNTATFTGTTLYPNDRRPHGLRLYGLSATTNTVGFNLPAWSLIWRVAV EECCCHHHHCCCCCCCEEECEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH ALGLILLAGWLYPRERLPLFLLGLLLVVFWLTLGYLARHWLLPSFELVLLGLGFVVVWNW HHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECH QRQIIDTWLHFRQRLLQGQNLDYGLAVAALIGLLAISWPSLSQAANEWLPKAKKLDPGAI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHH IVVSLAVASLFIAGFYWGDLNRLLDRLNRRLRTRQGLGWALLGLVVGVWLVYSWGVIRQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH NYLGNADYSDNGVVARNLVAGRGWVVDYVTQFFKLYPDGSVTRVQETWPMLQPVWIAPFF HHHCCCCCCCCCCEEHHHHCCCCHHHHHHHHHHHHCCCCCCEEHHHHCCCCCHHHHHHHH ALFGPEPWAAKIPNLIFFSLLSIVVYRIARQLWDQRVGLIAVLLVLINRHMFRLMIYSTS HHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC DLAFVLFYTAAIWLLWRSLVTHSKERLLGSGLIIGLMCWQKTSAVIVAIGMGLWLIWRLW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHH QVEDRWKAYRTAALWWVLPAVLVFSPYIARNLHEFGKPAFSTESYDAWIIGYTNFDSIYN HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHEE IYTNEQGLPGSNGLPEPSWILRWGYQKTFDKIGNQFEATRNYLLPASPALGMFSGRGNLM EECCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCC GNNDQGVNGQPYVWLMLGAWLSLIGLIAARRQQASLIALVGASFTPYIIFLALYWHADEE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCC RYFVPLVPFLALLAAGALVAIHDAIARCWNQRGRPLALLVAAQLLVLALTPGWVEAANKS CEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCC ATVAGSEYAEWQPDLQAFEWLRQNTPPEAVVMTRVPWQLNFHAERAAVMNPNVADLAVIK CEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCEECCCCHHHHHHHH QVADYYKASFILVNAVQNNKDQAQIGLGRLLKGEELPGFVLRASFAGPKNRTVYIYEIQ HHHHHHHHHEEEEEEHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA