Click here to switch to the map view.

The map label for this gene is pimB [H]

Identifier: 159900343

GI number: 159900343

Start: 4803723

End: 4804952

Strand: Direct

Name: pimB [H]

Synonym: Haur_3826

Alternate gene names: 159900343

Gene position: 4803723-4804952 (Clockwise)

Preceding gene: 159900342

Following gene: 159900344

Centisome position: 75.69

GC content: 55.12

Gene sequence:

>1230_bases
ATGCGCATACTCATGATTGCGTCGTCGTTTCCCAAATATCCAGGTGAGATGACCGCGCCCTTTATCGAAGAAATTGCCGC
CGCCGTGGTCGAGCGTGGCCACGAGGTGCATATGCTTTTGCCCGATCACCCCGAACTCAAACGTGGCGATCAGGTACGGG
GCATGCAGATCCATCGCTATCGCTATGCGCCGCATCCGAGCTTAAATGTTTGGGGCTATGCTGGTGCGTTGCATAATGAT
GTACAAATGCGCAACGCCGCGCTTTTGGTTGCACCCTTGGCAGTTGCTTCAGCATGGCGCACCATGGCCCAGCTTACCGC
CCAACAACCCTTCGATTTAATTCATGGTCACTGGTCGATTCCGAATGGCTTTCCGGCTTGGTTGCTAGCGCGGCAACGAA
AATTACCACTGATTATCAGCACGCATGGCTCGGATGTTTCGGTGGCTGAGCGCACTGCCCCAACTGGCTGGATCAATACA
GCGATCATGCGCTATGCCTCGGCAATCACTGCGCCATCGAGCGATCTGACGACGCGGGCAGCGGCTTTGGGCGCAGAACC
TGCTAAATTGCATGTACTGCCCTATTGTGTTGATGCCGTTGATTTTCGGCCCGATCCCGCCGTTGGCGCGGCCTTTCGCC
AACAACATGGCCTCGATACTGCTACACCATTGTTATTTACGGTTGGGCGCATGGTCGAGAAAAAAGGCTTTCGCTATTTG
GTGCAGGCCTTTGCTCAGGTGCTAGCCCAGCATCCAACCGCCAAATTGATGATCGGTGGCTATGGCCCAGGCCTAGAGCA
ACTTATGGCTCAAGCCGCTGATCTAGGGATTGGCGAGGCCGTGCTATTTCCCGGGGCAATTGGTCACGATCTCATCAATA
GTGCCTTGAATGCTGCTACAATCTTCATCCTGCCTTCGGTGCGCGATCGCAGTGGCAACGTCGATGGCTTGCCCAATACC
CTGCTCGAAGCCATGGGCGCGGGTCGGCCAATTATCGCCAGCAAGATTGCCGGAGTGCCTGGAGTAATTACTTCGGGCGA
ACATGGCTTGTTGGTAGCACCTGCCCAGCCACAAGCACTGAGTGCCGCGATCAACGATCTACTCAATCAACCAGAACGGG
CTAGGCTGCTAGGTAAAGCGGCGCGGTTACGGGTTGAAACCGAATTAACTTGGAACCGTTATGCCGCGCGGCTTGAACAG
CTGTATACTGCGGCGATACAATCGTCATAA

Upstream 100 bases:

>100_bases
TGGAGCCAAAACTGTAGCTGCAATGTTCCAACGACTCCAAACTGATTGATCATCATACACGGCTATTGCATGTTGATAGC
CTATGAGCGAATAGCAAGTT

Downstream 100 bases:

>100_bases
TTCGGGATGGCTATTCCCTCCCCCCTAGCCCGCTCAGCAGGCGAAAGGGCGCTTACAAAGGTCGGTTTTTGATCGTTTTC
ATTTGCGAACCACCAATCCC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: Alpha-D-mannose-alpha-(1-6)-phosphatidylmyo-inositol-mannosyltransferase; Alpha-mannosyltransferase; Alpha-manT; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MRILMIASSFPKYPGEMTAPFIEEIAAAVVERGHEVHMLLPDHPELKRGDQVRGMQIHRYRYAPHPSLNVWGYAGALHND
VQMRNAALLVAPLAVASAWRTMAQLTAQQPFDLIHGHWSIPNGFPAWLLARQRKLPLIISTHGSDVSVAERTAPTGWINT
AIMRYASAITAPSSDLTTRAAALGAEPAKLHVLPYCVDAVDFRPDPAVGAAFRQQHGLDTATPLLFTVGRMVEKKGFRYL
VQAFAQVLAQHPTAKLMIGGYGPGLEQLMAQAADLGIGEAVLFPGAIGHDLINSALNAATIFILPSVRDRSGNVDGLPNT
LLEAMGAGRPIIASKIAGVPGVITSGEHGLLVAPAQPQALSAAINDLLNQPERARLLGKAARLRVETELTWNRYAARLEQ
LYTAAIQSS

Sequences:

>Translated_409_residues
MRILMIASSFPKYPGEMTAPFIEEIAAAVVERGHEVHMLLPDHPELKRGDQVRGMQIHRYRYAPHPSLNVWGYAGALHND
VQMRNAALLVAPLAVASAWRTMAQLTAQQPFDLIHGHWSIPNGFPAWLLARQRKLPLIISTHGSDVSVAERTAPTGWINT
AIMRYASAITAPSSDLTTRAAALGAEPAKLHVLPYCVDAVDFRPDPAVGAAFRQQHGLDTATPLLFTVGRMVEKKGFRYL
VQAFAQVLAQHPTAKLMIGGYGPGLEQLMAQAADLGIGEAVLFPGAIGHDLINSALNAATIFILPSVRDRSGNVDGLPNT
LLEAMGAGRPIIASKIAGVPGVITSGEHGLLVAPAQPQALSAAINDLLNQPERARLLGKAARLRVETELTWNRYAARLEQ
LYTAAIQSS
>Mature_409_residues
MRILMIASSFPKYPGEMTAPFIEEIAAAVVERGHEVHMLLPDHPELKRGDQVRGMQIHRYRYAPHPSLNVWGYAGALHND
VQMRNAALLVAPLAVASAWRTMAQLTAQQPFDLIHGHWSIPNGFPAWLLARQRKLPLIISTHGSDVSVAERTAPTGWINT
AIMRYASAITAPSSDLTTRAAALGAEPAKLHVLPYCVDAVDFRPDPAVGAAFRQQHGLDTATPLLFTVGRMVEKKGFRYL
VQAFAQVLAQHPTAKLMIGGYGPGLEQLMAQAADLGIGEAVLFPGAIGHDLINSALNAATIFILPSVRDRSGNVDGLPNT
LLEAMGAGRPIIASKIAGVPGVITSGEHGLLVAPAQPQALSAAINDLLNQPERARLLGKAARLRVETELTWNRYAARLEQ
LYTAAIQSS

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose resid

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=224, Percent_Identity=28.125, Blast_Score=79, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17532709, Length=225, Percent_Identity=25.7777777777778, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 44048; Mature: 44048

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILMIASSFPKYPGEMTAPFIEEIAAAVVERGHEVHMLLPDHPELKRGDQVRGMQIHRY
CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEE
RYAPHPSLNVWGYAGALHNDVQMRNAALLVAPLAVASAWRTMAQLTAQQPFDLIHGHWSI
ECCCCCCCEEEEECCHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC
PNGFPAWLLARQRKLPLIISTHGSDVSVAERTAPTGWINTAIMRYASAITAPSSDLTTRA
CCCCHHHHHHHCCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
AALGAEPAKLHVLPYCVDAVDFRPDPAVGAAFRQQHGLDTATPLLFTVGRMVEKKGFRYL
HHHCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VQAFAQVLAQHPTAKLMIGGYGPGLEQLMAQAADLGIGEAVLFPGAIGHDLINSALNAAT
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHCCEE
IFILPSVRDRSGNVDGLPNTLLEAMGAGRPIIASKIAGVPGVITSGEHGLLVAPAQPQAL
EEEEECCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCEEEECCCCHHH
SAAINDLLNQPERARLLGKAARLRVETELTWNRYAARLEQLYTAAIQSS
HHHHHHHHCCCHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRILMIASSFPKYPGEMTAPFIEEIAAAVVERGHEVHMLLPDHPELKRGDQVRGMQIHRY
CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEE
RYAPHPSLNVWGYAGALHNDVQMRNAALLVAPLAVASAWRTMAQLTAQQPFDLIHGHWSI
ECCCCCCCEEEEECCHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC
PNGFPAWLLARQRKLPLIISTHGSDVSVAERTAPTGWINTAIMRYASAITAPSSDLTTRA
CCCCHHHHHHHCCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
AALGAEPAKLHVLPYCVDAVDFRPDPAVGAAFRQQHGLDTATPLLFTVGRMVEKKGFRYL
HHHCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VQAFAQVLAQHPTAKLMIGGYGPGLEQLMAQAADLGIGEAVLFPGAIGHDLINSALNAAT
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHCCEE
IFILPSVRDRSGNVDGLPNTLLEAMGAGRPIIASKIAGVPGVITSGEHGLLVAPAQPQAL
EEEEECCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCEEEECCCCHHH
SAAINDLLNQPERARLLGKAARLRVETELTWNRYAARLEQLYTAAIQSS
HHHHHHHHCCCHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA