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The map label for this gene is yqjE [H]

Identifier: 159900330

GI number: 159900330

Start: 4786075

End: 4787157

Strand: Reverse

Name: yqjE [H]

Synonym: Haur_3813

Alternate gene names: 159900330

Gene position: 4787157-4786075 (Counterclockwise)

Preceding gene: 159900331

Following gene: 159900329

Centisome position: 75.43

GC content: 52.17

Gene sequence:

>1083_bases
ATGGCTATCAATCAAGAGCGTCTGCTCGATACGTTTTGTACTTTGGTTCGGATCGATAATCCATCTGGTGAAGAAGCAGC
CATGGCTGCTCACTTAATCGAGCGCTGCCAAGCTTTGGGCCTTGAATGCGAGCAGGATGCGATTGGCAATGTGATTGCCC
GTTTGGCTGGCGTAGGTTCACCCTTGTTGCTGAATGCCCATATGGATAGCGTTGCACCATGTCATGGCAAGCAGCCAGTC
ATCCGCGATGGCAATATCTACAGCGCTGGCGATACCGTTTTGGGTGCTGATGATTTGGCGGGGGTTACGGCATTTCTCGA
GGGCATTCAAGCAGTTTTAGAATCAGGCCAGCCGCATCGGGCAATTGAATTGGTTTTTACGGTGCAAGAAGAGACAGGGT
TGTATGGCGCTCGTGCCCTCGATTATAGCAAGCTGCAAGCCAAACAAGGCCTCGCTTTCGATTTAAATGGCGATGTTGGG
GCGATTTGTATTGGTTCACCCGCCCACGATTCGTTCACCGCGACGATTACTGGGGTTTCGGCCCACGCTGGAGTTGCCCC
CGAAAAAGGCATCAGCGCGATTGAAGTTGCCGCGCATGCGATTGCTGCCATGCCTTTGGGGCGGCTCGATGACGAAACCA
CCGCCAATATTGGCTCGATCCATGGTGGCAAGGCCAACAATATTGTGCCCGATTCAGTTGTGGTCAAAGGCGAGGCTCGT
TCGCGCAACCAAGCCAAACTCGATGCCCAATGGCACATTATGCGCAATGCTTTTGAGCAAGCTGCCGCTAAATTTGGCGC
GACAGTTGAAATTGAACACAAACAACATTATGGCCCCAGCGTGCTAGCCCCCGATGCGGAAATTGTGCAGTTGCTCAATC
AAGCGATTCGGGCGATTGGGCTTGAGCCTTCGTTGGTGGTCACGGGCGGCGGCAGCGATGTCAGCATTATCAGCAATAAT
GGCATCGAAACTGCCAACTTGGCGATTGGCTACGAAAATATTCACTCGGTCGATGAGTTTATTCCGATTGTGCAACTGCA
ACGAGCTGCCCAAATCGTCGAACAAATGCTCTTGATGGTTTAA

Upstream 100 bases:

>100_bases
AATGGCGGCGAAGGTACCAGTGTTGGCGGCTCATTGGCAGGGATTGTCATGTCGGCAGCATTGGAAATCAATCCATAAGC
GTTTTTTTGAAGGATTTTTC

Downstream 100 bases:

>100_bases
ATCGATCGTTCTACCGTAAGCCGCTGGGCTGCTTGTGGGCAGTTTACAGCGGCTTATGCTTAATTTGGGGTAGTTATGCG
TTATCGTTGGTTGCTTTTGC

Product: peptidase T-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MAINQERLLDTFCTLVRIDNPSGEEAAMAAHLIERCQALGLECEQDAIGNVIARLAGVGSPLLLNAHMDSVAPCHGKQPV
IRDGNIYSAGDTVLGADDLAGVTAFLEGIQAVLESGQPHRAIELVFTVQEETGLYGARALDYSKLQAKQGLAFDLNGDVG
AICIGSPAHDSFTATITGVSAHAGVAPEKGISAIEVAAHAIAAMPLGRLDDETTANIGSIHGGKANNIVPDSVVVKGEAR
SRNQAKLDAQWHIMRNAFEQAAAKFGATVEIEHKQHYGPSVLAPDAEIVQLLNQAIRAIGLEPSLVVTGGGSDVSIISNN
GIETANLAIGYENIHSVDEFIPIVQLQRAAQIVEQMLLMV

Sequences:

>Translated_360_residues
MAINQERLLDTFCTLVRIDNPSGEEAAMAAHLIERCQALGLECEQDAIGNVIARLAGVGSPLLLNAHMDSVAPCHGKQPV
IRDGNIYSAGDTVLGADDLAGVTAFLEGIQAVLESGQPHRAIELVFTVQEETGLYGARALDYSKLQAKQGLAFDLNGDVG
AICIGSPAHDSFTATITGVSAHAGVAPEKGISAIEVAAHAIAAMPLGRLDDETTANIGSIHGGKANNIVPDSVVVKGEAR
SRNQAKLDAQWHIMRNAFEQAAAKFGATVEIEHKQHYGPSVLAPDAEIVQLLNQAIRAIGLEPSLVVTGGGSDVSIISNN
GIETANLAIGYENIHSVDEFIPIVQLQRAAQIVEQMLLMV
>Mature_359_residues
AINQERLLDTFCTLVRIDNPSGEEAAMAAHLIERCQALGLECEQDAIGNVIARLAGVGSPLLLNAHMDSVAPCHGKQPVI
RDGNIYSAGDTVLGADDLAGVTAFLEGIQAVLESGQPHRAIELVFTVQEETGLYGARALDYSKLQAKQGLAFDLNGDVGA
ICIGSPAHDSFTATITGVSAHAGVAPEKGISAIEVAAHAIAAMPLGRLDDETTANIGSIHGGKANNIVPDSVVVKGEARS
RNQAKLDAQWHIMRNAFEQAAAKFGATVEIEHKQHYGPSVLAPDAEIVQLLNQAIRAIGLEPSLVVTGGGSDVSIISNNG
IETANLAIGYENIHSVDEFIPIVQLQRAAQIVEQMLLMV

Specific function: Could be a peptidase [H]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI1787372, Length=271, Percent_Identity=24.7232472324723, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786432, Length=190, Percent_Identity=28.4210526315789, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010162
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.4.11.4 [C]

Molecular weight: Translated: 37809; Mature: 37678

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINQERLLDTFCTLVRIDNPSGEEAAMAAHLIERCQALGLECEQDAIGNVIARLAGVGS
CCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
PLLLNAHMDSVAPCHGKQPVIRDGNIYSAGDTVLGADDLAGVTAFLEGIQAVLESGQPHR
CEEEECCCCCCCCCCCCCCEEECCCEEECCCCEECCHHHHHHHHHHHHHHHHHHCCCCCE
AIELVFTVQEETGLYGARALDYSKLQAKQGLAFDLNGDVGAICIGSPAHDSFTATITGVS
EEEEEEEEEHHCCCCCHHHCCHHHHHHHCCCEEEECCCEEEEEECCCCCCCEEEEEEECC
AHAGVAPEKGISAIEVAAHAIAAMPLGRLDDETTANIGSIHGGKANNIVPDSVVVKGEAR
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
SRNQAKLDAQWHIMRNAFEQAAAKFGATVEIEHKQHYGPSVLAPDAEIVQLLNQAIRAIG
CCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHC
LEPSLVVTGGGSDVSIISNNGIETANLAIGYENIHSVDEFIPIVQLQRAAQIVEQMLLMV
CCCCEEEECCCCEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AINQERLLDTFCTLVRIDNPSGEEAAMAAHLIERCQALGLECEQDAIGNVIARLAGVGS
CCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
PLLLNAHMDSVAPCHGKQPVIRDGNIYSAGDTVLGADDLAGVTAFLEGIQAVLESGQPHR
CEEEECCCCCCCCCCCCCCEEECCCEEECCCCEECCHHHHHHHHHHHHHHHHHHCCCCCE
AIELVFTVQEETGLYGARALDYSKLQAKQGLAFDLNGDVGAICIGSPAHDSFTATITGVS
EEEEEEEEEHHCCCCCHHHCCHHHHHHHCCCEEEECCCEEEEEECCCCCCCEEEEEEECC
AHAGVAPEKGISAIEVAAHAIAAMPLGRLDDETTANIGSIHGGKANNIVPDSVVVKGEAR
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
SRNQAKLDAQWHIMRNAFEQAAAKFGATVEIEHKQHYGPSVLAPDAEIVQLLNQAIRAIG
CCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHC
LEPSLVVTGGGSDVSIISNNGIETANLAIGYENIHSVDEFIPIVQLQRAAQIVEQMLLMV
CCCCEEEECCCCEEEEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Aminopeptidases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]