| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900327
Identifier: 159900327
GI number: 159900327
Start: 4782607
End: 4783491
Strand: Direct
Name: 159900327
Synonym: Haur_3810
Alternate gene names: NA
Gene position: 4782607-4783491 (Clockwise)
Preceding gene: 159900326
Following gene: 159900328
Centisome position: 75.36
GC content: 54.92
Gene sequence:
>885_bases ATGGGTCGTTTGTTGGTTGTGGTAGTTACGCTGGTTTTGTTGCTGCTTGGCAATTTGGCTCAATCGATTGCTGCTCAAGG TGATGGGCATCAATATCATGCGGCGGTGGTCGTGCAATATGCTTCCGGCGCGGTCGATGCTCGTTGTGTTGGCTTCGATC AAGAATCAATTAGTGGCTATGATGCTTTGCTGGCAGCAGGCTTCAATGTGGTGGCTGAAGGCTCATCGATGGGAGCAATG GTTTGCTCAATTGATAGTGTGGGCTGCGATTATCCCAATGAATCGTGTGCCTGCAAATGCCAAGGCGGCGATTGTACCTA CTGGGCCTATAGCCATTTGCTCGATGGTGTTTGGCAATATTCCAAGCTTGGCGCTGGCTCATACAAGGTCCGTGATGGCG CAGTTGAAGGCTGGGCTTGGGGTGGTGGCAGTGTCGAGCGTGGCTCAACGCCGCCAGTGATCAGTTGGGGTGAGGTTTGC GCGGCGCAAGCAGCACCGGTGGCAACCGAAATTCCGGCAACCGCCACTAGCGAACCAACCGCCATTCCCGCAACCAATAC TTTAGTTCCGGCAACAATCGCTAGCCAGCCAAGCAGCACCGCTAACCCAACCAGCGAGGCTATTGCAACTGAAACCCAAT TTGAACCAAGTGCAACCACAAAAGTCGCCAGCCCAACTATTGCGGCGAGCGCAACAACTGCTCCGACCGAGCAGGCAACT GCCAGCCCCAGCATTACGCCCACTGCGACGCTGACGATCGTGAGCACGCCAACCGTTGAGGCCAGCAGTAGCGGCTCAGC AATTCCGATCAATTACTTGATTTTTGGCTTGATTTTGCTGGCCTTGGCTGGCGGCGGCATTTGGAAGCGCCAGAGCAAGC GATGA
Upstream 100 bases:
>100_bases CCCAGCGAGGCGAGGGGGGAGCCGCGAAAAGCCCCTCGCCCGCCGCAGTGGGAGAGGGGTTGGGGTGAGGGCATTCTTTA CTGAATAGGAATAACATTTC
Downstream 100 bases:
>100_bases GTGCCGAAATCTATCAACCAACTGCTGGACGTGCCCGCGAGGCTTTGACCAAAACTGCTCCGCCAACGGCCAACAAGGAA TGGTTCAGTCCAGTTAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MGRLLVVVVTLVLLLLGNLAQSIAAQGDGHQYHAAVVVQYASGAVDARCVGFDQESISGYDALLAAGFNVVAEGSSMGAM VCSIDSVGCDYPNESCACKCQGGDCTYWAYSHLLDGVWQYSKLGAGSYKVRDGAVEGWAWGGGSVERGSTPPVISWGEVC AAQAAPVATEIPATATSEPTAIPATNTLVPATIASQPSSTANPTSEAIATETQFEPSATTKVASPTIAASATTAPTEQAT ASPSITPTATLTIVSTPTVEASSSGSAIPINYLIFGLILLALAGGGIWKRQSKR
Sequences:
>Translated_294_residues MGRLLVVVVTLVLLLLGNLAQSIAAQGDGHQYHAAVVVQYASGAVDARCVGFDQESISGYDALLAAGFNVVAEGSSMGAM VCSIDSVGCDYPNESCACKCQGGDCTYWAYSHLLDGVWQYSKLGAGSYKVRDGAVEGWAWGGGSVERGSTPPVISWGEVC AAQAAPVATEIPATATSEPTAIPATNTLVPATIASQPSSTANPTSEAIATETQFEPSATTKVASPTIAASATTAPTEQAT ASPSITPTATLTIVSTPTVEASSSGSAIPINYLIFGLILLALAGGGIWKRQSKR >Mature_293_residues GRLLVVVVTLVLLLLGNLAQSIAAQGDGHQYHAAVVVQYASGAVDARCVGFDQESISGYDALLAAGFNVVAEGSSMGAMV CSIDSVGCDYPNESCACKCQGGDCTYWAYSHLLDGVWQYSKLGAGSYKVRDGAVEGWAWGGGSVERGSTPPVISWGEVCA AQAAPVATEIPATATSEPTAIPATNTLVPATIASQPSSTANPTSEAIATETQFEPSATTKVASPTIAASATTAPTEQATA SPSITPTATLTIVSTPTVEASSSGSAIPINYLIFGLILLALAGGGIWKRQSKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29894; Mature: 29763
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLLVVVVTLVLLLLGNLAQSIAAQGDGHQYHAAVVVQYASGAVDARCVGFDQESISGY CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEEECCCHHHHCHH DALLAAGFNVVAEGSSMGAMVCSIDSVGCDYPNESCACKCQGGDCTYWAYSHLLDGVWQY HHHHHCCCEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEHHHHHHHHHHHHHH SKLGAGSYKVRDGAVEGWAWGGGSVERGSTPPVISWGEVCAAQAAPVATEIPATATSEPT HHCCCCCEEEECCCCCCEECCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCC AIPATNTLVPATIASQPSSTANPTSEAIATETQFEPSATTKVASPTIAASATTAPTEQAT CCCCCCCEECCHHCCCCCCCCCCCHHHHHCCCCCCCCCCCEECCCCEECCCCCCCCCCCC ASPSITPTATLTIVSTPTVEASSSGSAIPINYLIFGLILLALAGGGIWKRQSKR CCCCCCCCEEEEEEECCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GRLLVVVVTLVLLLLGNLAQSIAAQGDGHQYHAAVVVQYASGAVDARCVGFDQESISGY CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEEECCCHHHHCHH DALLAAGFNVVAEGSSMGAMVCSIDSVGCDYPNESCACKCQGGDCTYWAYSHLLDGVWQY HHHHHCCCEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEHHHHHHHHHHHHHH SKLGAGSYKVRDGAVEGWAWGGGSVERGSTPPVISWGEVCAAQAAPVATEIPATATSEPT HHCCCCCEEEECCCCCCEECCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCC AIPATNTLVPATIASQPSSTANPTSEAIATETQFEPSATTKVASPTIAASATTAPTEQAT CCCCCCCEECCHHCCCCCCCCCCCHHHHHCCCCCCCCCCCEECCCCEECCCCCCCCCCCC ASPSITPTATLTIVSTPTVEASSSGSAIPINYLIFGLILLALAGGGIWKRQSKR CCCCCCCCEEEEEEECCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA