Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159900328

Identifier: 159900328

GI number: 159900328

Start: 4783488

End: 4784678

Strand: Direct

Name: 159900328

Synonym: Haur_3811

Alternate gene names: NA

Gene position: 4783488-4784678 (Clockwise)

Preceding gene: 159900327

Following gene: 159900340

Centisome position: 75.37

GC content: 55.08

Gene sequence:

>1191_bases
ATGAGTGCCGAAATCTATCAACCAACTGCTGGACGTGCCCGCGAGGCTTTGACCAAAACTGCTCCGCCAACGGCCAACAA
GGAATGGTTCAGTCCAGTTAGCCAACGTCAGCGCCGCATCGCCCGCCCATGGGAAGGCGGCCATAGTTTGGCGTGGGTTG
CTTGGCTGGTCGCAGCCTTGGCATGTATCGGCCAAACCGATCAACCGCTCTATTTGATTTTGATTGGGGCGGTGACGTTG
TTGGTTTGGCAGAGTTGCGCCTTGGATAGCCCGTTTCAGGCGGTGGTACGGGTTATGTTGCAACTTGGGGCGGTGTTGTT
TGGCTTTAATTTGCTGTTTAGCGTGATTACCGCCAGTGTGCTGCGCGGCCAAACGGTGCTGTTTGAGTTGCCAAGTTGGC
GCTTGCCGCAACTGCTTGGTGGCATTCAACTGGGCGGAATTATTACCGCTGAGCAATTAGCAAGTGGTGCAGTGCGTGGG
CTACGTTTGTGGACATTGTTGCTGGTGGTTGGTACATTCAACGCCTGTGTCAATCATTATCGCTTGTTACGGCGCACGCC
CCAAGGCTTTTTTCAATTGGGCTTGGTGCTAACCATTGGCTTGGCGTTTGTGCCCCAAACCTTGCTACGCTTACGGGCAA
TTCGTGATGCCCAACGCTTGCGCGGCCATCGCTTTCGTTCGTGGCGTGATGCATTGCCCTTGTTTGTGCCCTTGCTCAGC
GGCGGCCTAGAGCAATCGCTGACCCTAGCCGAAGCCATGGAAGCCCGTGGGTTTGGTCGCGCTCAACGTGGTCAAATCGC
CGCCTACTGGACATGGCTGGGTTTGGCGGGCGTGTTGCTGGTCTGTGCTGGCATTTGGATGCTGTTTTTCTATGCTAGAG
CCAGCTTGGGCGCAATGGTCGCTTGGGTATTATTGGCACTTGGCTTGATTGCCATGCTCAGTTATTGGTGGCAAGCCAAT
CGGCTGATTGTGCGCACCAGTTATCGCCGCGAACGCTGGACATTCCGCGCTACGGTCATAACGCTTTTGGCGCTGGCTGC
GCCGCTAGGGTTTTGGCTAGCACAGCGCTCAGGCAGTGCCATGGTTTATCGCATTTACCCCAAATTAGCTTGGCCACCAT
TTGAGCCATTGCTGACCCTGGCAATTTTGGCCTTGCTTGCGCCATTATTGTTTAAGTCTAGCGCTCGCTAA

Upstream 100 bases:

>100_bases
CCAGCAGTAGCGGCTCAGCAATTCCGATCAATTACTTGATTTTTGGCTTGATTTTGCTGGCCTTGGCTGGCGGCGGCATT
TGGAAGCGCCAGAGCAAGCG

Downstream 100 bases:

>100_bases
ATGAAACAATCGCCTGCAATACCGCCGGATCATTCGGAATCGTGTATTGGGTCCAATCGTCTTCGACCACAATATTTGGC
TGCACACCTTTGGTTTCAAA

Product: cobalt transport protein

Products: NA

Alternate protein names: ABC Transporter-Associated Permease; Cobalt Transporter; Permease Component Of ABC-Type Cobalt Transport System

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MSAEIYQPTAGRAREALTKTAPPTANKEWFSPVSQRQRRIARPWEGGHSLAWVAWLVAALACIGQTDQPLYLILIGAVTL
LVWQSCALDSPFQAVVRVMLQLGAVLFGFNLLFSVITASVLRGQTVLFELPSWRLPQLLGGIQLGGIITAEQLASGAVRG
LRLWTLLLVVGTFNACVNHYRLLRRTPQGFFQLGLVLTIGLAFVPQTLLRLRAIRDAQRLRGHRFRSWRDALPLFVPLLS
GGLEQSLTLAEAMEARGFGRAQRGQIAAYWTWLGLAGVLLVCAGIWMLFFYARASLGAMVAWVLLALGLIAMLSYWWQAN
RLIVRTSYRRERWTFRATVITLLALAAPLGFWLAQRSGSAMVYRIYPKLAWPPFEPLLTLAILALLAPLLFKSSAR

Sequences:

>Translated_396_residues
MSAEIYQPTAGRAREALTKTAPPTANKEWFSPVSQRQRRIARPWEGGHSLAWVAWLVAALACIGQTDQPLYLILIGAVTL
LVWQSCALDSPFQAVVRVMLQLGAVLFGFNLLFSVITASVLRGQTVLFELPSWRLPQLLGGIQLGGIITAEQLASGAVRG
LRLWTLLLVVGTFNACVNHYRLLRRTPQGFFQLGLVLTIGLAFVPQTLLRLRAIRDAQRLRGHRFRSWRDALPLFVPLLS
GGLEQSLTLAEAMEARGFGRAQRGQIAAYWTWLGLAGVLLVCAGIWMLFFYARASLGAMVAWVLLALGLIAMLSYWWQAN
RLIVRTSYRRERWTFRATVITLLALAAPLGFWLAQRSGSAMVYRIYPKLAWPPFEPLLTLAILALLAPLLFKSSAR
>Mature_395_residues
SAEIYQPTAGRAREALTKTAPPTANKEWFSPVSQRQRRIARPWEGGHSLAWVAWLVAALACIGQTDQPLYLILIGAVTLL
VWQSCALDSPFQAVVRVMLQLGAVLFGFNLLFSVITASVLRGQTVLFELPSWRLPQLLGGIQLGGIITAEQLASGAVRGL
RLWTLLLVVGTFNACVNHYRLLRRTPQGFFQLGLVLTIGLAFVPQTLLRLRAIRDAQRLRGHRFRSWRDALPLFVPLLSG
GLEQSLTLAEAMEARGFGRAQRGQIAAYWTWLGLAGVLLVCAGIWMLFFYARASLGAMVAWVLLALGLIAMLSYWWQANR
LIVRTSYRRERWTFRATVITLLALAAPLGFWLAQRSGSAMVYRIYPKLAWPPFEPLLTLAILALLAPLLFKSSAR

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44065; Mature: 43934

Theoretical pI: Translated: 11.86; Mature: 11.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAEIYQPTAGRAREALTKTAPPTANKEWFSPVSQRQRRIARPWEGGHSLAWVAWLVAAL
CCCCCCCCCHHHHHHHHHCCCCCCCHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
ACIGQTDQPLYLILIGAVTLLVWQSCALDSPFQAVVRVMLQLGAVLFGFNLLFSVITASV
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRGQTVLFELPSWRLPQLLGGIQLGGIITAEQLASGAVRGLRLWTLLLVVGTFNACVNHY
HCCCEEEEECCCCCHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLRRTPQGFFQLGLVLTIGLAFVPQTLLRLRAIRDAQRLRGHRFRSWRDALPLFVPLLS
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGLEQSLTLAEAMEARGFGRAQRGQIAAYWTWLGLAGVLLVCAGIWMLFFYARASLGAMV
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWVLLALGLIAMLSYWWQANRLIVRTSYRRERWTFRATVITLLALAAPLGFWLAQRSGSA
HHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
MVYRIYPKLAWPPFEPLLTLAILALLAPLLFKSSAR
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA