| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900306
Identifier: 159900306
GI number: 159900306
Start: 4758597
End: 4759139
Strand: Direct
Name: 159900306
Synonym: Haur_3789
Alternate gene names: NA
Gene position: 4758597-4759139 (Clockwise)
Preceding gene: 159900305
Following gene: 159900309
Centisome position: 74.98
GC content: 48.62
Gene sequence:
>543_bases ATGAGCACTATTGCCTTTTTACGCGCAATCAACATTACCAACCACTTTGTAAAGATGGAAGAGTTACGCGATGTCTTAGT GGCCCATGGTTTTAGCAATGTTCAGACCTATATTCAATCGGGCAATGTGGTTTTTGATGATCCAACCCAAAGCTATGCTG AGGCCGAGCACTTGATTGCAACCCAACTTGAGGACTGTTTTGGCTTTGCAGTCGCAACATTTCTACGTTCTGCCGCCGAA TTGGTCGAGCTTGAACAAGCCTGCCCATTTACGCCAAGCGAGATCGATCCGCAAGCGGCTTTGTATGTGACGTTTGTGCA GCACGAACCAGATGCTGAAGCCCAAGCCCGTTTAGCCCAATATCAAAATGAGTTGGATACATTTCGGATCACAGGGCGGC ATGTGTGGTGGTTGCGGCATAAACAGCGCGGGGAAAGTAAGTTTAGCGGGGCAAAATTGGAGCGAGCGATCAAACAGGCC GGAACCGCCCGTAATATCACCACAATTCGCGCGATGATCGCCAAATATGGGTTTACCAAATAG
Upstream 100 bases:
>100_bases ATCCAATCAACCATTACCGATAGCCCATAGCCTGATCTCTTCTGCGCCTCTGCGTTTATAATAGATCTTATGTTCTATAT TCTCTCGACGCGAGGTAACG
Downstream 100 bases:
>100_bases CTGGCTTCCAGCATTTGAAAGCCAGCTCGTGGATTATTCAGCAATCAGGCCGCGCCGTTTGAAGTCGGCAGTTACTCGCG CCGTCAGATCGTAGAGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSTIAFLRAINITNHFVKMEELRDVLVAHGFSNVQTYIQSGNVVFDDPTQSYAEAEHLIATQLEDCFGFAVATFLRSAAE LVELEQACPFTPSEIDPQAALYVTFVQHEPDAEAQARLAQYQNELDTFRITGRHVWWLRHKQRGESKFSGAKLERAIKQA GTARNITTIRAMIAKYGFTK
Sequences:
>Translated_180_residues MSTIAFLRAINITNHFVKMEELRDVLVAHGFSNVQTYIQSGNVVFDDPTQSYAEAEHLIATQLEDCFGFAVATFLRSAAE LVELEQACPFTPSEIDPQAALYVTFVQHEPDAEAQARLAQYQNELDTFRITGRHVWWLRHKQRGESKFSGAKLERAIKQA GTARNITTIRAMIAKYGFTK >Mature_179_residues STIAFLRAINITNHFVKMEELRDVLVAHGFSNVQTYIQSGNVVFDDPTQSYAEAEHLIATQLEDCFGFAVATFLRSAAEL VELEQACPFTPSEIDPQAALYVTFVQHEPDAEAQARLAQYQNELDTFRITGRHVWWLRHKQRGESKFSGAKLERAIKQAG TARNITTIRAMIAKYGFTK
Specific function: Unknown
COG id: COG3797
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20341; Mature: 20210
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIAFLRAINITNHFVKMEELRDVLVAHGFSNVQTYIQSGNVVFDDPTQSYAEAEHLIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHH TQLEDCFGFAVATFLRSAAELVELEQACPFTPSEIDPQAALYVTFVQHEPDAEAQARLAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHH YQNELDTFRITGRHVWWLRHKQRGESKFSGAKLERAIKQAGTARNITTIRAMIAKYGFTK HHHHHHHEEECCCEEEEEHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure STIAFLRAINITNHFVKMEELRDVLVAHGFSNVQTYIQSGNVVFDDPTQSYAEAEHLIA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHH TQLEDCFGFAVATFLRSAAELVELEQACPFTPSEIDPQAALYVTFVQHEPDAEAQARLAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHH YQNELDTFRITGRHVWWLRHKQRGESKFSGAKLERAIKQAGTARNITTIRAMIAKYGFTK HHHHHHHEEECCCEEEEEHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA