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The map label for this gene is scpB [H]

Identifier: 159900304

GI number: 159900304

Start: 4755677

End: 4756501

Strand: Direct

Name: scpB [H]

Synonym: Haur_3787

Alternate gene names: 159900304

Gene position: 4755677-4756501 (Clockwise)

Preceding gene: 159900303

Following gene: 159900305

Centisome position: 74.93

GC content: 51.15

Gene sequence:

>825_bases
ATGACTGGGCAATCATCAATTCAAACATTGCTGCGCCATTGGCTCAAGCTGTTTGCCTTGGCGATTGCCCAGTTGGTTCA
ATATTTCGTCAAGCCACCAAACCAGCTAGCAATGAATGTAGATCAAGCACCACCTATGCCTATTACCCCAACTGACCAAC
CAGAAATTGAAGCCGAATCGTGCTCAATTGAGGTAGTTGCAAACCCTGAGTTTGAGCCTGCTGTTTTGATTGAGCCAGTT
GAATCGCCATCGCCAATGCCAACCCTGACCGAGCATTTACACCCTGATTTATTGCTGCGAGCCGAGGCTGTGCTGTTTGT
CGCCGGTGATCCGGTTGAATATGCGACCTTGGCCAATGCCCTCGAATTGCGTGAGCAGGACATTCCGCTGTTAATTGCGG
ATTTACGCCAGCGCTTCGCTGGGCGCGGCATTCGGTTGCAAGATCAAGCTGGCACCTTGCAATTAGTTAGTGCGCCCGAA
GCCACCAGCGCCCTCGAACGCTTTCTAGGGGTCAGCCAACCGCAAAAACTCTCACCAGCAGCACTTGAGGTTTTGGCAAT
TATTGCCTATCGTCAGCCAGTAACGCGGGCTGGGCTTGAGGCAATTCGTGGGGTCGATTCGAGTGGCGTTGTACGTTCGC
TCTTGGCGCGTGAATTAATTTATGAGGTTGGGCGGGCTGAAACGATTGGCCGCCCAGTGCTTTATGGCACAACCAGCCAA
TTTTTGCATATTTTTGGGATTACCAGTTTAGCTGAATTGCCAGCCTTTAATTTTGAACGCCAAGCCCCAACCGACCCCGA
TGCAGCTCAAGAACGACTGTTTTAA

Upstream 100 bases:

>100_bases
AAAATATTCAAGCCCTCAAGCGCAAAATTATGCTCAACAAAATTGGCCTTGGGCGGATTGAAGTTAAAGTTGCTCGAACC
GAAGCAACTGTCTAAATTCC

Downstream 100 bases:

>100_bases
GCGATTTTGTTGGATTACCCCTGCTCGTACTCTGTGATATGTGACACCTTGCGTCATAAACCTGCTTAGGGTATGATCAA
GTTATAATGACTGTGCGCCT

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MTGQSSIQTLLRHWLKLFALAIAQLVQYFVKPPNQLAMNVDQAPPMPITPTDQPEIEAESCSIEVVANPEFEPAVLIEPV
ESPSPMPTLTEHLHPDLLLRAEAVLFVAGDPVEYATLANALELREQDIPLLIADLRQRFAGRGIRLQDQAGTLQLVSAPE
ATSALERFLGVSQPQKLSPAALEVLAIIAYRQPVTRAGLEAIRGVDSSGVVRSLLARELIYEVGRAETIGRPVLYGTTSQ
FLHIFGITSLAELPAFNFERQAPTDPDAAQERLF

Sequences:

>Translated_274_residues
MTGQSSIQTLLRHWLKLFALAIAQLVQYFVKPPNQLAMNVDQAPPMPITPTDQPEIEAESCSIEVVANPEFEPAVLIEPV
ESPSPMPTLTEHLHPDLLLRAEAVLFVAGDPVEYATLANALELREQDIPLLIADLRQRFAGRGIRLQDQAGTLQLVSAPE
ATSALERFLGVSQPQKLSPAALEVLAIIAYRQPVTRAGLEAIRGVDSSGVVRSLLARELIYEVGRAETIGRPVLYGTTSQ
FLHIFGITSLAELPAFNFERQAPTDPDAAQERLF
>Mature_273_residues
TGQSSIQTLLRHWLKLFALAIAQLVQYFVKPPNQLAMNVDQAPPMPITPTDQPEIEAESCSIEVVANPEFEPAVLIEPVE
SPSPMPTLTEHLHPDLLLRAEAVLFVAGDPVEYATLANALELREQDIPLLIADLRQRFAGRGIRLQDQAGTLQLVSAPEA
TSALERFLGVSQPQKLSPAALEVLAIIAYRQPVTRAGLEAIRGVDSSGVVRSLLARELIYEVGRAETIGRPVLYGTTSQF
LHIFGITSLAELPAFNFERQAPTDPDAAQERLF

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpA that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 29975; Mature: 29844

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGQSSIQTLLRHWLKLFALAIAQLVQYFVKPPNQLAMNVDQAPPMPITPTDQPEIEAES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCCCCCCCCCCC
CSIEVVANPEFEPAVLIEPVESPSPMPTLTEHLHPDLLLRAEAVLFVAGDPVEYATLANA
CEEEEEECCCCCCEEEEECCCCCCCCCHHHHHCCHHHHEEEEEEEEEECCCHHHHHHHHH
LELREQDIPLLIADLRQRFAGRGIRLQDQAGTLQLVSAPEATSALERFLGVSQPQKLSPA
HHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCEEEEECCCHHHHHHHHHCCCCCCCCCHH
ALEVLAIIAYRQPVTRAGLEAIRGVDSSGVVRSLLARELIYEVGRAETIGRPVLYGTTSQ
HHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHCCCCEEECCHHH
FLHIFGITSLAELPAFNFERQAPTDPDAAQERLF
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure 
TGQSSIQTLLRHWLKLFALAIAQLVQYFVKPPNQLAMNVDQAPPMPITPTDQPEIEAES
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCCCCCCCCCCC
CSIEVVANPEFEPAVLIEPVESPSPMPTLTEHLHPDLLLRAEAVLFVAGDPVEYATLANA
CEEEEEECCCCCCEEEEECCCCCCCCCHHHHHCCHHHHEEEEEEEEEECCCHHHHHHHHH
LELREQDIPLLIADLRQRFAGRGIRLQDQAGTLQLVSAPEATSALERFLGVSQPQKLSPA
HHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCEEEEECCCHHHHHHHHHCCCCCCCCCHH
ALEVLAIIAYRQPVTRAGLEAIRGVDSSGVVRSLLARELIYEVGRAETIGRPVLYGTTSQ
HHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHCCCCEEECCHHH
FLHIFGITSLAELPAFNFERQAPTDPDAAQERLF
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA