Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900287

Identifier: 159900287

GI number: 159900287

Start: 4738594

End: 4739310

Strand: Reverse

Name: 159900287

Synonym: Haur_3770

Alternate gene names: NA

Gene position: 4739310-4738594 (Counterclockwise)

Preceding gene: 159900288

Following gene: 159900286

Centisome position: 74.67

GC content: 50.91

Gene sequence:

>717_bases
ATGGCAGCAATATTCATTGGAATTACGGTCATTTGTTATGCCGTAGCAATTTTATTATGGCTGCGCTTTCGCTCATACCG
CTATTTGCTGGTGTTGATTGCAGGCCATTGCACCATCGTAGCCGAGCCGATTTTGCAACGTTTGTATAGCCTAACCTACC
CCGATAATGTGGCAGCAATAGGCATCCTTGGCAATCCTGTGCCGATCTATGCGTTGCTGGCGGCTAGTTGGATTGGCTCG
TTACCAGTGTTGTTGATGTATTTCGGTCAACAGCAACATTGGTGGACACGCCATTATCTGACAGGAGTGGTAGCGTATGT
GGCGCTTGTGCTCTATCACATTATCATTCAAGGGTTAGCCGCCCGCACCGGGTTATGGCGTTATAGCCAAAATGTTGGGG
CTTGGGGGATTAATTTCTATCTCTTGATGGCGGTTTTTGCTGGGCTAAGCTCATTGCTCTTGTTCTATGCTATGGTTGCC
AGCCGCTATTATGCCGCCGAAATTGCTGTGCCAACTCTGGTTGCCGCCAGCATCGGATCGCCGTTGATCTGCTTTGGCTT
GCTGGGAGCGCCGTTCTGGCTACCACGCTTAATCGGCAGCAGCGGCAATTTTACCAAGCCTGCGTTACTGGTGATTGCAG
GGCTGGTGCTGTGGGTTGTGCATTTGGCCAGCGCGGGGATTCATGCTTCGCGCCAGCAACATGTGATTGAACGATGA

Upstream 100 bases:

>100_bases
CCTGAGCGATCAACTTTGGACGATCAAACAAGGCCAAATTTTGATTTACGAGTACGATTGGTCATCAAGCGAACGTAAAA
ATTAGCGCGAGGTTTGGTGC

Downstream 100 bases:

>100_bases
CAGAACATAGAGCATAGAACATAAACATTTGAATAATCGACCTTCACGATAAGGAACTTTGATTATGACAAAGGTATTGG
TGCTTCGCGCACCGGGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MAAIFIGITVICYAVAILLWLRFRSYRYLLVLIAGHCTIVAEPILQRLYSLTYPDNVAAIGILGNPVPIYALLAASWIGS
LPVLLMYFGQQQHWWTRHYLTGVVAYVALVLYHIIIQGLAARTGLWRYSQNVGAWGINFYLLMAVFAGLSSLLLFYAMVA
SRYYAAEIAVPTLVAASIGSPLICFGLLGAPFWLPRLIGSSGNFTKPALLVIAGLVLWVVHLASAGIHASRQQHVIER

Sequences:

>Translated_238_residues
MAAIFIGITVICYAVAILLWLRFRSYRYLLVLIAGHCTIVAEPILQRLYSLTYPDNVAAIGILGNPVPIYALLAASWIGS
LPVLLMYFGQQQHWWTRHYLTGVVAYVALVLYHIIIQGLAARTGLWRYSQNVGAWGINFYLLMAVFAGLSSLLLFYAMVA
SRYYAAEIAVPTLVAASIGSPLICFGLLGAPFWLPRLIGSSGNFTKPALLVIAGLVLWVVHLASAGIHASRQQHVIER
>Mature_237_residues
AAIFIGITVICYAVAILLWLRFRSYRYLLVLIAGHCTIVAEPILQRLYSLTYPDNVAAIGILGNPVPIYALLAASWIGSL
PVLLMYFGQQQHWWTRHYLTGVVAYVALVLYHIIIQGLAARTGLWRYSQNVGAWGINFYLLMAVFAGLSSLLLFYAMVAS
RYYAAEIAVPTLVAASIGSPLICFGLLGAPFWLPRLIGSSGNFTKPALLVIAGLVLWVVHLASAGIHASRQQHVIER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26177; Mature: 26045

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAIFIGITVICYAVAILLWLRFRSYRYLLVLIAGHCTIVAEPILQRLYSLTYPDNVAAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
GILGNPVPIYALLAASWIGSLPVLLMYFGQQQHWWTRHYLTGVVAYVALVLYHIIIQGLA
EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARTGLWRYSQNVGAWGINFYLLMAVFAGLSSLLLFYAMVASRYYAAEIAVPTLVAASIGS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLICFGLLGAPFWLPRLIGSSGNFTKPALLVIAGLVLWVVHLASAGIHASRQQHVIER
HHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
>Mature Secondary Structure 
AAIFIGITVICYAVAILLWLRFRSYRYLLVLIAGHCTIVAEPILQRLYSLTYPDNVAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
GILGNPVPIYALLAASWIGSLPVLLMYFGQQQHWWTRHYLTGVVAYVALVLYHIIIQGLA
EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARTGLWRYSQNVGAWGINFYLLMAVFAGLSSLLLFYAMVASRYYAAEIAVPTLVAASIGS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLICFGLLGAPFWLPRLIGSSGNFTKPALLVIAGLVLWVVHLASAGIHASRQQHVIER
HHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA