| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900281
Identifier: 159900281
GI number: 159900281
Start: 4733682
End: 4734041
Strand: Reverse
Name: 159900281
Synonym: Haur_3764
Alternate gene names: NA
Gene position: 4734041-4733682 (Counterclockwise)
Preceding gene: 159900283
Following gene: 159900280
Centisome position: 74.59
GC content: 52.78
Gene sequence:
>360_bases ATGCTATCGTGGCGCACGCTTTTAGGTTGGGCAATGATTGTCCAGCTTGCTTTGGTGTGCCCATTGGGATGTGTGATTCA CTGTCTGCTGCAACACCAACCAATGTCAACGATGCCAGCGGCGCATCAAGCCAGCATGTTTGTCTGCGAACTCTCAACTC AGCACAATTCAACTCCAAGTGGCACGCCAAGCGGCCTGGCCCAAACCGGTATGGGCACGAGCTTGGTGGCAATGTTTGCG ATGGTTGCTTTTTGGCCAATTGCTGTCATCGCTTTGCGTAGCTTGCGCCGTTTGAATTGGCTGATTCAACGCCCCTTTGA TTCGTTTCAACTTCAATTGACCACGCCCCCTCCGCGCTAA
Upstream 100 bases:
>100_bases TCGCAAACGGCTTAAACTGTGTTAAGATAGCGCTCAATTCGGCGGCAACATCAGGCGGAAGCAAACCTGTATGCGTGGGT GGTACCAGAAAAAACGCATA
Downstream 100 bases:
>100_bases ACCCAACTCAACCCACAATTAATGGTTTTGTGATCTCATTGTGCGCTGCATGGTGAGGGTTTTTGAGTTTGGGAGTGTTC CGAGCATGACAATTCATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MLSWRTLLGWAMIVQLALVCPLGCVIHCLLQHQPMSTMPAAHQASMFVCELSTQHNSTPSGTPSGLAQTGMGTSLVAMFA MVAFWPIAVIALRSLRRLNWLIQRPFDSFQLQLTTPPPR
Sequences:
>Translated_119_residues MLSWRTLLGWAMIVQLALVCPLGCVIHCLLQHQPMSTMPAAHQASMFVCELSTQHNSTPSGTPSGLAQTGMGTSLVAMFA MVAFWPIAVIALRSLRRLNWLIQRPFDSFQLQLTTPPPR >Mature_119_residues MLSWRTLLGWAMIVQLALVCPLGCVIHCLLQHQPMSTMPAAHQASMFVCELSTQHNSTPSGTPSGLAQTGMGTSLVAMFA MVAFWPIAVIALRSLRRLNWLIQRPFDSFQLQLTTPPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13132; Mature: 13132
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSWRTLLGWAMIVQLALVCPLGCVIHCLLQHQPMSTMPAAHQASMFVCELSTQHNSTPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEECCCCCCCCCC GTPSGLAQTGMGTSLVAMFAMVAFWPIAVIALRSLRRLNWLIQRPFDSFQLQLTTPPPR CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC >Mature Secondary Structure MLSWRTLLGWAMIVQLALVCPLGCVIHCLLQHQPMSTMPAAHQASMFVCELSTQHNSTPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEECCCCCCCCCC GTPSGLAQTGMGTSLVAMFAMVAFWPIAVIALRSLRRLNWLIQRPFDSFQLQLTTPPPR CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA