| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900283
Identifier: 159900283
GI number: 159900283
Start: 4734666
End: 4735154
Strand: Reverse
Name: 159900283
Synonym: Haur_3766
Alternate gene names: NA
Gene position: 4735154-4734666 (Counterclockwise)
Preceding gene: 159900286
Following gene: 159900281
Centisome position: 74.61
GC content: 47.44
Gene sequence:
>489_bases ATGAGTTCTGCGCACATTTCTGGACGTTTGCTGATCGTAACGCTTGGTTCGATTATTTTGTATCTGATCTATAATATTGG CTCGATTTTTTTGATTGATCCGCGCACATACCCAACATTGTTTATTGTCGTGACGGTGTTTGGTGTTGTAGGCTTTGGGC TAGGGATTTACCTGGCTGCACGCTGGGCACTCAAACCACGACGCTATCGCGAAACCGAGCGCATTGGCCTACTCGTTCAA GCGCAGGTGATCGATTGTGTCGCCACTGGCTGGAAACACAAACAATCACGCGGCTTTGCCACAGGAATTAGCGAGCGTGA ATATCGGGTGACTGTTGAGCTTAACCAGCCTGATCAGCCTCGTAGCCAAGCAACTGTGTATGGTTATTTTCCCAACAATC AGATTCCTCGGCGAAATCAATATTTGAGCTTACGGATTCACCCTCGTGATCCTAAGATTGTTGTGTTGGCTAAAGCAGCC ACGGAATAA
Upstream 100 bases:
>100_bases GGTGCGGCTATCGGCGGGCATCCAAAAAATTCGTTCGGTCAAACGATGGAGTTGATCAAGGGCATGCATTACAATTCCTG CTCTAACAAAGGAGTCTACG
Downstream 100 bases:
>100_bases AGCGTTTGCTGCGTTGTTGATAGCTGGCATAATTGGCAAAGCGTTGACTAAGCAATTGCTCTTCGTAATGCGCTTTGAAC CACAAATTAATCATTAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSSAHISGRLLIVTLGSIILYLIYNIGSIFLIDPRTYPTLFIVVTVFGVVGFGLGIYLAARWALKPRRYRETERIGLLVQ AQVIDCVATGWKHKQSRGFATGISEREYRVTVELNQPDQPRSQATVYGYFPNNQIPRRNQYLSLRIHPRDPKIVVLAKAA TE
Sequences:
>Translated_162_residues MSSAHISGRLLIVTLGSIILYLIYNIGSIFLIDPRTYPTLFIVVTVFGVVGFGLGIYLAARWALKPRRYRETERIGLLVQ AQVIDCVATGWKHKQSRGFATGISEREYRVTVELNQPDQPRSQATVYGYFPNNQIPRRNQYLSLRIHPRDPKIVVLAKAA TE >Mature_161_residues SSAHISGRLLIVTLGSIILYLIYNIGSIFLIDPRTYPTLFIVVTVFGVVGFGLGIYLAARWALKPRRYRETERIGLLVQA QVIDCVATGWKHKQSRGFATGISEREYRVTVELNQPDQPRSQATVYGYFPNNQIPRRNQYLSLRIHPRDPKIVVLAKAAT E
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18347; Mature: 18215
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAHISGRLLIVTLGSIILYLIYNIGSIFLIDPRTYPTLFIVVTVFGVVGFGLGIYLAA CCCCCCCCEEEEEHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH RWALKPRRYRETERIGLLVQAQVIDCVATGWKHKQSRGFATGISEREYRVTVELNQPDQP HHCCCCHHHCCHHHHEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC RSQATVYGYFPNNQIPRRNQYLSLRIHPRDPKIVVLAKAATE CCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCC >Mature Secondary Structure SSAHISGRLLIVTLGSIILYLIYNIGSIFLIDPRTYPTLFIVVTVFGVVGFGLGIYLAA CCCCCCCEEEEEHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH RWALKPRRYRETERIGLLVQAQVIDCVATGWKHKQSRGFATGISEREYRVTVELNQPDQP HHCCCCHHHCCHHHHEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC RSQATVYGYFPNNQIPRRNQYLSLRIHPRDPKIVVLAKAATE CCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA