| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900279
Identifier: 159900279
GI number: 159900279
Start: 4732342
End: 4733118
Strand: Reverse
Name: 159900279
Synonym: Haur_3762
Alternate gene names: NA
Gene position: 4733118-4732342 (Counterclockwise)
Preceding gene: 159900280
Following gene: 159900278
Centisome position: 74.58
GC content: 53.67
Gene sequence:
>777_bases ATGCTTACAAGCCGTGTCATCGTGCCTAGCCAACGCCGTTTTTTAGTTGGTGGTTTGGCTAGCATCGCGATTAGTTTGCT GGTGTTGGGTCTGAGTGTTTGGCAAATGCCCGAGCAAACTGCACCAACAACGCTGCCAACGAGCCAACCAACTGCGGTTG CCGCAGCGCCAATCCCTCAATTTACCCGGGAATCGACCACCGATTGGAGCCTTGGCAAGCCAACCGCACCAATTGTGCTC GATTTGTATACCGATTTAACTTGTAGCCATTGCCGTGACCTGCATTTGGCCATGGAATCGAAGGGCTTTCTCAGCCAATT TATCGATTCAGGCGATGTCTACTTGCGTATTCATATGATGGCGATGCCCGAGGTTTCGCCTTGGTCGGTCGATGTCACGG TGATGAGCGTGTGTGCTGGCAGCCAAGGTCAATTTTGGCCAGCCTACGATGCGTTGATGCGTGATGCGACGTGGCTGACC GCCCCCAATCCGCGTCAGCAAGCCCAAATTCAAGTGCTGCAAGCAACCACCCTCGATCGCCAAGCGTTTGAGGCTTGTTT TCAACGCCCCGATTTTGGCCGTGAAATCGTAGCGTTTAGTCGTTGGCAAGTTGCCAATGGCTTAGCTGGCGCACCTACTG CCTATGTCAATGGGCATGCGGTGGTTTGGCGCAGCAACCCAATCGACGATCTCGTCACGGCAATTCAACAATGGTTACCA GAGCCTGCAACCCCACAACGGCGTGATCCAGGTGGCAGTCTGCACCAACAGTATTAA
Upstream 100 bases:
>100_bases GCCCAAGGCTTGATGTTTGCAGGCTATGGCGATGCTTTAACTCCACAACAGGTCGATGATGTGGTGGCCTATTTATTAAG CTTGAAGTAAGGCGGACACC
Downstream 100 bases:
>100_bases TGTCGATCGCCACAGGTGGTTAGCTGCCTGTGGCTCCAACCAGCACCACAACGAGGTTTTTTGAATGACGACTACCACAA CCACCAACGACGGAGCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MLTSRVIVPSQRRFLVGGLASIAISLLVLGLSVWQMPEQTAPTTLPTSQPTAVAAAPIPQFTRESTTDWSLGKPTAPIVL DLYTDLTCSHCRDLHLAMESKGFLSQFIDSGDVYLRIHMMAMPEVSPWSVDVTVMSVCAGSQGQFWPAYDALMRDATWLT APNPRQQAQIQVLQATTLDRQAFEACFQRPDFGREIVAFSRWQVANGLAGAPTAYVNGHAVVWRSNPIDDLVTAIQQWLP EPATPQRRDPGGSLHQQY
Sequences:
>Translated_258_residues MLTSRVIVPSQRRFLVGGLASIAISLLVLGLSVWQMPEQTAPTTLPTSQPTAVAAAPIPQFTRESTTDWSLGKPTAPIVL DLYTDLTCSHCRDLHLAMESKGFLSQFIDSGDVYLRIHMMAMPEVSPWSVDVTVMSVCAGSQGQFWPAYDALMRDATWLT APNPRQQAQIQVLQATTLDRQAFEACFQRPDFGREIVAFSRWQVANGLAGAPTAYVNGHAVVWRSNPIDDLVTAIQQWLP EPATPQRRDPGGSLHQQY >Mature_258_residues MLTSRVIVPSQRRFLVGGLASIAISLLVLGLSVWQMPEQTAPTTLPTSQPTAVAAAPIPQFTRESTTDWSLGKPTAPIVL DLYTDLTCSHCRDLHLAMESKGFLSQFIDSGDVYLRIHMMAMPEVSPWSVDVTVMSVCAGSQGQFWPAYDALMRDATWLT APNPRQQAQIQVLQATTLDRQAFEACFQRPDFGREIVAFSRWQVANGLAGAPTAYVNGHAVVWRSNPIDDLVTAIQQWLP EPATPQRRDPGGSLHQQY
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28435; Mature: 28435
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSRVIVPSQRRFLVGGLASIAISLLVLGLSVWQMPEQTAPTTLPTSQPTAVAAAPIPQ CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCH FTRESTTDWSLGKPTAPIVLDLYTDLTCSHCRDLHLAMESKGFLSQFIDSGDVYLRIHMM HHCCCCCCCCCCCCCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEEE AMPEVSPWSVDVTVMSVCAGSQGQFWPAYDALMRDATWLTAPNPRQQAQIQVLQATTLDR ECCCCCCCEEHHHHEEECCCCCCCCCHHHHHHHHCCEEECCCCCCHHHHEEEHHHHHHHH QAFEACFQRPDFGREIVAFSRWQVANGLAGAPTAYVNGHAVVWRSNPIDDLVTAIQQWLP HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHCC EPATPQRRDPGGSLHQQY CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLTSRVIVPSQRRFLVGGLASIAISLLVLGLSVWQMPEQTAPTTLPTSQPTAVAAAPIPQ CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCH FTRESTTDWSLGKPTAPIVLDLYTDLTCSHCRDLHLAMESKGFLSQFIDSGDVYLRIHMM HHCCCCCCCCCCCCCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEEE AMPEVSPWSVDVTVMSVCAGSQGQFWPAYDALMRDATWLTAPNPRQQAQIQVLQATTLDR ECCCCCCCEEHHHHEEECCCCCCCCCHHHHHHHHCCEEECCCCCCHHHHEEEHHHHHHHH QAFEACFQRPDFGREIVAFSRWQVANGLAGAPTAYVNGHAVVWRSNPIDDLVTAIQQWLP HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHCC EPATPQRRDPGGSLHQQY CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA