Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159900278

Identifier: 159900278

GI number: 159900278

Start: 4730823

End: 4732277

Strand: Reverse

Name: 159900278

Synonym: Haur_3761

Alternate gene names: NA

Gene position: 4732277-4730823 (Counterclockwise)

Preceding gene: 159900279

Following gene: 159900276

Centisome position: 74.56

GC content: 53.2

Gene sequence:

>1455_bases
ATGACGACTACCACAACCACCAACGACGGAGCAATCACCGACGAACGCCGTTCACAATCTGTTTTCTATCGCGCAATCTG
GCGTTGGCATTTCTATGCCGGTTTGTTTGTTGTGCCGCTGATGATTGTCCTAGCCGTAACTGGCAGCATTTATCTATTCA
AGCCCCAACTTGACCGTTTGATGTACGGCGATTTGATGCATGTCCAACACACCAGTGGCTCGGCGCAAAGCTACACTAGC
CAATTGGCCGCTGCCCAAGCTGCTTATCCCGCTGCCAGCGTTGGCAAAATTCGCCCAAGCGATGCCCACGATCGTAGCAC
TGAAATTAGTATGAGCACCAGCGATGGCCGTAATCTGACGGTTTTCGTCAATCCCTATACCAATCAAGTGCTCGGCGAGC
GCGATGAAGATTGGAATTTACAAACGATTGCCTTGAAATTACACGGCGAGTTGCTGATTGGCACAACGGGCGATCGGATT
ATTGAATTAGCCGCTTGCTGGGCGATTTTGCTGACTCTTTCGGGGTTGTATCTCTGGTGGCCACGCTCGAAAAGTGGCAT
CTGGGGCACGTGGCTGCCACGCTTGCGCAGCAAAAACAAACGGATTTTCTGGCGCGATTTGCATGCCGTGCCTGGCATGT
ATGCCTCGTTGATTGTGCTGTTTTTGCTGATTTCGGGCTTGCCGTGGACTGGCTATTGGGGTGATAAATTTGCTAATGTT
TGGAGCGGTTACCCCAATCAACTTTGGAGCAATATTCCTGAATCTACAGTATTGACTGGCAGCCTCAACACCACAACCGA
CAAAGTTGTGCCGTGGGCAGTTGAACAAGCGCCATTGCCTCAATCTGACCCTGATCATGCTGAGCATCGTGGTGATGGAG
CGAGTGCGCCGGTGCCAAGCAGCGCTACCGAAGGCCCACAAGCCGCAACGCCCGTCACGCTTGATTCGGTGATTGAAGTC
GCCAAAGCCCGTGGCGTGATTGCCAGCTTTACGGTTACGCCACCTGATGGAGAAAAAGGCGTGTACACCATCGCTGCGGT
GGCGAATGATCCTGCTGATGAAGCCACAATTCACGTTGATCAATATAGCGGAGCGATTTTGGCCGACATTCGCTGGCGTG
ATTATGCCATGGTTCCCAAAGCTGTTAGCATGGGTATTTCGCTGCACGAAGGTAAATATTTCGGGCTGGCTAACCAACTT
TTAGCCTTGTTTGGGGCCATGACGGTGCTGTTGCTATCGGTTTCGGGCGTGGTGTTGTGGTGGAAACGCCGCCCTGAGGG
CCGCTTGGGTGCGCCCAATTTGCCAGCCAACTTCCCCCACTGGAAGCCTGTGTTGCTGATGGTGGTGCTGGCGAGCTTGG
CCTTCCCCTTGGTTGGCGCTTCGTTGTTGTTTATGCTGGTGTTGGACCTGACGGTGTTTCGGTTTGCGCCAAGCCTCAAG
CAACGCCTTGCTTAG

Upstream 100 bases:

>100_bases
CGTGATCCAGGTGGCAGTCTGCACCAACAGTATTAATGTCGATCGCCACAGGTGGTTAGCTGCCTGTGGCTCCAACCAGC
ACCACAACGAGGTTTTTTGA

Downstream 100 bases:

>100_bases
GGTAATTGCGGCTCGTTGCTATGACTGCGAGCAAAGCGGTCGAGCACCCGCCGCAACACCCGTAAGGCCAATTCCATCTG
TGGCACGGAAAGTAAGCGGG

Product: peptidase

Products: NA

Alternate protein names: Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Domain-Containing Protein; Sulfite Reductase; PepSY-Associated TM Helix Family; Peptidase; Flavodoxin/Nitric Oxide Synthase; PepSY-Associated TM Helix Family Protein; PepSY-Associated Membrane Protein; PepSY-Associated TM Helix; PepSY-Associated TM Helix Containing Protein; Pepsy-Associated Tm Helix Domain Protein; Outer Membrane Protein; Oxidoreductase; Transmembrane Protein; PepSY Amd Peptidase M4 Protein; Conserved Iron-Regulated Membrane Protein; M4 Family Peptidase; Bifunctional Protein Flavoprotein Alpha-Component; Bifunctional Sulfite Reductase; Sulfite Reductase Flavoprotein Subunit Alpha; Transmembrane Transporter; Iron-Regulated Transmembrane Protein

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MTTTTTTNDGAITDERRSQSVFYRAIWRWHFYAGLFVVPLMIVLAVTGSIYLFKPQLDRLMYGDLMHVQHTSGSAQSYTS
QLAAAQAAYPAASVGKIRPSDAHDRSTEISMSTSDGRNLTVFVNPYTNQVLGERDEDWNLQTIALKLHGELLIGTTGDRI
IELAACWAILLTLSGLYLWWPRSKSGIWGTWLPRLRSKNKRIFWRDLHAVPGMYASLIVLFLLISGLPWTGYWGDKFANV
WSGYPNQLWSNIPESTVLTGSLNTTTDKVVPWAVEQAPLPQSDPDHAEHRGDGASAPVPSSATEGPQAATPVTLDSVIEV
AKARGVIASFTVTPPDGEKGVYTIAAVANDPADEATIHVDQYSGAILADIRWRDYAMVPKAVSMGISLHEGKYFGLANQL
LALFGAMTVLLLSVSGVVLWWKRRPEGRLGAPNLPANFPHWKPVLLMVVLASLAFPLVGASLLFMLVLDLTVFRFAPSLK
QRLA

Sequences:

>Translated_484_residues
MTTTTTTNDGAITDERRSQSVFYRAIWRWHFYAGLFVVPLMIVLAVTGSIYLFKPQLDRLMYGDLMHVQHTSGSAQSYTS
QLAAAQAAYPAASVGKIRPSDAHDRSTEISMSTSDGRNLTVFVNPYTNQVLGERDEDWNLQTIALKLHGELLIGTTGDRI
IELAACWAILLTLSGLYLWWPRSKSGIWGTWLPRLRSKNKRIFWRDLHAVPGMYASLIVLFLLISGLPWTGYWGDKFANV
WSGYPNQLWSNIPESTVLTGSLNTTTDKVVPWAVEQAPLPQSDPDHAEHRGDGASAPVPSSATEGPQAATPVTLDSVIEV
AKARGVIASFTVTPPDGEKGVYTIAAVANDPADEATIHVDQYSGAILADIRWRDYAMVPKAVSMGISLHEGKYFGLANQL
LALFGAMTVLLLSVSGVVLWWKRRPEGRLGAPNLPANFPHWKPVLLMVVLASLAFPLVGASLLFMLVLDLTVFRFAPSLK
QRLA
>Mature_483_residues
TTTTTTNDGAITDERRSQSVFYRAIWRWHFYAGLFVVPLMIVLAVTGSIYLFKPQLDRLMYGDLMHVQHTSGSAQSYTSQ
LAAAQAAYPAASVGKIRPSDAHDRSTEISMSTSDGRNLTVFVNPYTNQVLGERDEDWNLQTIALKLHGELLIGTTGDRII
ELAACWAILLTLSGLYLWWPRSKSGIWGTWLPRLRSKNKRIFWRDLHAVPGMYASLIVLFLLISGLPWTGYWGDKFANVW
SGYPNQLWSNIPESTVLTGSLNTTTDKVVPWAVEQAPLPQSDPDHAEHRGDGASAPVPSSATEGPQAATPVTLDSVIEVA
KARGVIASFTVTPPDGEKGVYTIAAVANDPADEATIHVDQYSGAILADIRWRDYAMVPKAVSMGISLHEGKYFGLANQLL
ALFGAMTVLLLSVSGVVLWWKRRPEGRLGAPNLPANFPHWKPVLLMVVLASLAFPLVGASLLFMLVLDLTVFRFAPSLKQ
RLA

Specific function: Unknown

COG id: COG3182

COG function: function code S; Uncharacterized iron-regulated membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53174; Mature: 53042

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTTTTNDGAITDERRSQSVFYRAIWRWHFYAGLFVVPLMIVLAVTGSIYLFKPQLDRL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHH
MYGDLMHVQHTSGSAQSYTSQLAAAQAAYPAASVGKIRPSDAHDRSTEISMSTSDGRNLT
HHCCHHEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEE
VFVNPYTNQVLGERDEDWNLQTIALKLHGELLIGTTGDRIIELAACWAILLTLSGLYLWW
EEECCCHHHHCCCCCCCCCEEEEEEEEECEEEEECCCHHHHHHHHHHHHHHHHCCEEEEE
PRSKSGIWGTWLPRLRSKNKRIFWRDLHAVPGMYASLIVLFLLISGLPWTGYWGDKFANV
CCCCCCCCHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
WSGYPNQLWSNIPESTVLTGSLNTTTDKVVPWAVEQAPLPQSDPDHAEHRGDGASAPVPS
HCCCHHHHHHCCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCC
SATEGPQAATPVTLDSVIEVAKARGVIASFTVTPPDGEKGVYTIAAVANDPADEATIHVD
CCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEE
QYSGAILADIRWRDYAMVPKAVSMGISLHEGKYFGLANQLLALFGAMTVLLLSVSGVVLW
CCCCEEEEEECCCCHHHCCHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE
WKRRPEGRLGAPNLPANFPHWKPVLLMVVLASLAFPLVGASLLFMLVLDLTVFRFAPSLK
EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
QRLA
HHCC
>Mature Secondary Structure 
TTTTTTNDGAITDERRSQSVFYRAIWRWHFYAGLFVVPLMIVLAVTGSIYLFKPQLDRL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHH
MYGDLMHVQHTSGSAQSYTSQLAAAQAAYPAASVGKIRPSDAHDRSTEISMSTSDGRNLT
HHCCHHEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEE
VFVNPYTNQVLGERDEDWNLQTIALKLHGELLIGTTGDRIIELAACWAILLTLSGLYLWW
EEECCCHHHHCCCCCCCCCEEEEEEEEECEEEEECCCHHHHHHHHHHHHHHHHCCEEEEE
PRSKSGIWGTWLPRLRSKNKRIFWRDLHAVPGMYASLIVLFLLISGLPWTGYWGDKFANV
CCCCCCCCHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
WSGYPNQLWSNIPESTVLTGSLNTTTDKVVPWAVEQAPLPQSDPDHAEHRGDGASAPVPS
HCCCHHHHHHCCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCC
SATEGPQAATPVTLDSVIEVAKARGVIASFTVTPPDGEKGVYTIAAVANDPADEATIHVD
CCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEE
QYSGAILADIRWRDYAMVPKAVSMGISLHEGKYFGLANQLLALFGAMTVLLLSVSGVVLW
CCCCEEEEEECCCCHHHCCHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE
WKRRPEGRLGAPNLPANFPHWKPVLLMVVLASLAFPLVGASLLFMLVLDLTVFRFAPSLK
EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
QRLA
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA