| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900277
Identifier: 159900277
GI number: 159900277
Start: 4729624
End: 4730826
Strand: Direct
Name: 159900277
Synonym: Haur_3760
Alternate gene names: NA
Gene position: 4729624-4730826 (Clockwise)
Preceding gene: 159900273
Following gene: 159900282
Centisome position: 74.52
GC content: 56.53
Gene sequence:
>1203_bases ATGGCAACTCAGAAAAAATTGCTCGCTTCACGGCCTCAGATAGCCTTAGTTAAAATGAGCGAACAATCTGTGCAACAACG AATAACCGGCGCTTTAGCCGATGAAATAGGTGCGCGTCCGGCAACCTCGACCGCCGAGGCTCGTGCCGCCGCCGTGATCG CCGCTCAGATGCGTCAAGTTGGCCTCGAAGTTGGCGTGCAAACTTTCTCCGCCGCTGCTGCGCCAACCGCAGGCTTGGGC TTATTGGCAGCGATCGGCTTGTTGGCGCTCGGCTTAGGCTGGTGGTTTCCCTATCCTTCAGTCGCCTTGATTGCGCTATT ATTGCTGTTGGCAGGCCGCGAATTGCATGGCCCGCCCGTTTTGGCTGGCTTGTTGCGCCAACGCCCAAGCCAAAATGTGA TTGGCACACGGGCGGCAACCCGTATTCCTCGTGCTCGCATCGTTTTATTATGTCACCTTGATTCGCCGCGCATGCTCTCG CCACGCCGTGCCAGTTGGCTGCGGGTTTGGTTACTAACGATTCCATTTGGATTTAGTTTGAGCCTGATTGCGCTTGGGGT AGCGATTTTTCTACCTGCTTGGCATAGTGTGCTGTTAATTCCAGCATTCTTTTTGTTGCTCAGTTTGCTGGTGGTGATTC GGCGTGAGTGGAAGGCCGATTGGACGGTTGGCGCGGTCGATGCTGCTGCCGTTGGCACGGCAATCGCGTTGGCAGCCGAT TGGCCGCAACGTGAAGATGTAGAACTATGGGTCGTGGCGCTGGGCGCAGGGGCCGCCGCTGGTTCGGGTATTCAAGCCTT ATTGAATACCTATCCCTTCCCCAAAGCCGAAACGTGGTTTGTTAACCTGCCGTGGCTGGGCCGTGGCAACCTCACAATTG TGGCTGGAGAAGGATTGTGGCGCGAACGAAAGCCCGATCCTCAACTTACCAAAATGTTCCACGAACTACAATCCGCCAGC GCCCCACTGATTCGCTCGGCCTATCGGGGCGAACGCTTGGATAGCGCTCGGCTTTTGGCTATGGGCTATCACGCGGTCAG CGTGGTTGGCTTGAAATCCGATGGCACGGCAGCGGGCTTCCGTCAACCAGACGATGAAACCCGCTTACTTTCCGTGCCAC AGATGGAATTGGCCTTACGGGTGTTGCGGCGGGTGCTCGACCGCTTTGCTCGCAGTCATAGCAACGAGCCGCAATTACCC TAA
Upstream 100 bases:
>100_bases TACGATTATGTGTAGAATAGAACCCGCCCCCAAGCTGTGGGTTGACCAGAGAACTGAAGGTTTCGCCCAATCACCAACGA TTTTGCCTGTGGGGGTTGCC
Downstream 100 bases:
>100_bases GCAAGGCGTTGCTTGAGGCTTGGCGCAAACCGAAACACCGTCAGGTCCAACACCAGCATAAACAACAACGAAGCGCCAAC CAAGGGGAAGGCCAAGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MATQKKLLASRPQIALVKMSEQSVQQRITGALADEIGARPATSTAEARAAAVIAAQMRQVGLEVGVQTFSAAAAPTAGLG LLAAIGLLALGLGWWFPYPSVALIALLLLLAGRELHGPPVLAGLLRQRPSQNVIGTRAATRIPRARIVLLCHLDSPRMLS PRRASWLRVWLLTIPFGFSLSLIALGVAIFLPAWHSVLLIPAFFLLLSLLVVIRREWKADWTVGAVDAAAVGTAIALAAD WPQREDVELWVVALGAGAAAGSGIQALLNTYPFPKAETWFVNLPWLGRGNLTIVAGEGLWRERKPDPQLTKMFHELQSAS APLIRSAYRGERLDSARLLAMGYHAVSVVGLKSDGTAAGFRQPDDETRLLSVPQMELALRVLRRVLDRFARSHSNEPQLP
Sequences:
>Translated_400_residues MATQKKLLASRPQIALVKMSEQSVQQRITGALADEIGARPATSTAEARAAAVIAAQMRQVGLEVGVQTFSAAAAPTAGLG LLAAIGLLALGLGWWFPYPSVALIALLLLLAGRELHGPPVLAGLLRQRPSQNVIGTRAATRIPRARIVLLCHLDSPRMLS PRRASWLRVWLLTIPFGFSLSLIALGVAIFLPAWHSVLLIPAFFLLLSLLVVIRREWKADWTVGAVDAAAVGTAIALAAD WPQREDVELWVVALGAGAAAGSGIQALLNTYPFPKAETWFVNLPWLGRGNLTIVAGEGLWRERKPDPQLTKMFHELQSAS APLIRSAYRGERLDSARLLAMGYHAVSVVGLKSDGTAAGFRQPDDETRLLSVPQMELALRVLRRVLDRFARSHSNEPQLP >Mature_399_residues ATQKKLLASRPQIALVKMSEQSVQQRITGALADEIGARPATSTAEARAAAVIAAQMRQVGLEVGVQTFSAAAAPTAGLGL LAAIGLLALGLGWWFPYPSVALIALLLLLAGRELHGPPVLAGLLRQRPSQNVIGTRAATRIPRARIVLLCHLDSPRMLSP RRASWLRVWLLTIPFGFSLSLIALGVAIFLPAWHSVLLIPAFFLLLSLLVVIRREWKADWTVGAVDAAAVGTAIALAADW PQREDVELWVVALGAGAAAGSGIQALLNTYPFPKAETWFVNLPWLGRGNLTIVAGEGLWRERKPDPQLTKMFHELQSASA PLIRSAYRGERLDSARLLAMGYHAVSVVGLKSDGTAAGFRQPDDETRLLSVPQMELALRVLRRVLDRFARSHSNEPQLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43216; Mature: 43085
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATQKKLLASRPQIALVKMSEQSVQQRITGALADEIGARPATSTAEARAAAVIAAQMRQV CCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH GLEVGVQTFSAAAAPTAGLGLLAAIGLLALGLGWWFPYPSVALIALLLLLAGRELHGPPV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHH LAGLLRQRPSQNVIGTRAATRIPRARIVLLCHLDSPRMLSPRRASWLRVWLLTIPFGFSL HHHHHHCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHH SLIALGVAIFLPAWHSVLLIPAFFLLLSLLVVIRREWKADWTVGAVDAAAVGTAIALAAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEECC WPQREDVELWVVALGAGAAAGSGIQALLNTYPFPKAETWFVNLPWLGRGNLTIVAGEGLW CCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCEECCCCEEEEECCCCC RERKPDPQLTKMFHELQSASAPLIRSAYRGERLDSARLLAMGYHAVSVVGLKSDGTAAGF CCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHCCCEEEEEEEECCCCCCCCC RQPDDETRLLSVPQMELALRVLRRVLDRFARSHSNEPQLP CCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ATQKKLLASRPQIALVKMSEQSVQQRITGALADEIGARPATSTAEARAAAVIAAQMRQV CCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH GLEVGVQTFSAAAAPTAGLGLLAAIGLLALGLGWWFPYPSVALIALLLLLAGRELHGPPV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHH LAGLLRQRPSQNVIGTRAATRIPRARIVLLCHLDSPRMLSPRRASWLRVWLLTIPFGFSL HHHHHHCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHH SLIALGVAIFLPAWHSVLLIPAFFLLLSLLVVIRREWKADWTVGAVDAAAVGTAIALAAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEECC WPQREDVELWVVALGAGAAAGSGIQALLNTYPFPKAETWFVNLPWLGRGNLTIVAGEGLW CCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCEECCCCEEEEECCCCC RERKPDPQLTKMFHELQSASAPLIRSAYRGERLDSARLLAMGYHAVSVVGLKSDGTAAGF CCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHCCCEEEEEEEECCCCCCCCC RQPDDETRLLSVPQMELALRVLRRVLDRFARSHSNEPQLP CCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA