| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is mnmG [H]
Identifier: 159900273
GI number: 159900273
Start: 4722818
End: 4724770
Strand: Direct
Name: mnmG [H]
Synonym: Haur_3756
Alternate gene names: 159900273
Gene position: 4722818-4724770 (Clockwise)
Preceding gene: 159900272
Following gene: 159900277
Centisome position: 74.42
GC content: 54.48
Gene sequence:
>1953_bases ATGCTAAATTTAACTTATGATGTGGTCGTCGTTGGCGGCGGGCATGCGGGCTGTGAAGCGGCTTTGGCGGCTGCTCGTAT GGGTTCGCAAACCCTTTTGCTAACGATCGATCTTGATAAATTGGCGCACATGTCGTGCAATCCATCAATTGGCGGCCCAG CCAAAGGCAACCTTGTGCGCGAAATCGACGCACTCGGCGGCGCGATGGGGGTCATCACCGACCGCACCTTGATTCAGATT CGGCTGTTGAATGAAACCAAAGGCCCAGCCGTGCAAGCCTTACGCGCTCAAAGCGATAAGCGTTTGTATGCCAAGGCTAT GAAGGAGTTTCTTGAAGCGCAGCCAAATTTAGCGCTCAAACAGGCCATGGTTGAGCGCATCATTCCCTTGGCAGACCAAG CTGATGGGGCGCGTTTTGCCGTCGAAACCCAAACGGGCTGGCAATATCGGGCCAAAGCCTTGGTCTTGACCACAGGTACA TTTTTGCGTGGCCGCGCGATCACTGGCGAATCGATCATTCCTGCGGGGCGGATGGGCGAGCAACCAGCAATCAATCTTTC GAGCGATCTAAGCCAGTTGGGCTTTCCACTGGTGCGCTTGAAAACTGGCACGCCACCACGGATTGATGCGCGAACTATCG ATTTTAGTGGGCTAGAAATTCAGCCAGGTTCCAGCACGCCACTGTATTTTGGCTTTAATTACGATGGTCAGCGGCCTGAA TCGTTGGTACATGGCCCGCCCAATCCAATTTACCCTGAACCGATGCTTGATGGTTGGCAACCACAATTGCCCTGCTATCA TATTTACACTACGCCCGAATTTCACCAGCATATTCGCGATAACTTGCATCGTGCCCCGATGTTTAGCGGGGTGATCGAGG GGGTTGGGCCGCGCTACTGCCCGTCGATTGAAGATAAAATTGTGCGCTTTGCCGATAAAGAATCGCATGGGTTTTTCCTT GAGCCAGAAGGCTGGGAAACGCTCGAAATCTATGTGCAGGGCTGCAATACCTCGCTGCCTGAAGATGTGCAATGGGCTAT GTTGCGCTCGATTCCGGCTTTACGCAAGGTCGAAATTATGCGGGTTGGCTATGCGATTGAGTATGATGCCGTCGCAACTG GCGAAATTACCGCCTCGCTAGAAGCCAAACGCCTGCCAAATCTCTTCTTTGCTGGCCAAATTAATGGCACAACTGGCTAT GAAGAGGCGGGCGCTCAAGGCTTGATGGCGGGGATCAACGCTGCCTTGAAGGTTGCCGAGCGTGCACCATTCATTTTGCG CCGCGACCAAGCCTATATCGGCGTGATGATCGACGATTTAGTGACCAAGGAAATTCGCGAGCCATATCGCATGTTTACCT CACGGGCCGAGCATCGCTTGTTGTTGCGTGGCGATAATGCTGATCTGCGGCTCACCCCGTTGGCAGCTGAACTTGGTTTG GTTAGTGCTGAACGCGCTGCCCAGGTTGAGCGCAAGCAATGGGCAATTGATCAAGCAAGCCAGCAATTGCGCGGCTTGCG CTACACGCCCAGCGCTGAAACCAATGGTCGCCTGCAAGCTGCGGGCATCGAGCCATTGTTGCAACCAGCTTCAGGCGAAG ACATTCTGCGGCGGGTCGGGGTCAAGTATGCCCAACTGGCCGAAGTTCAGCCTGATCTACCAGTGGTTGAGGCCGATGTC GCCGAGCAAGTTGAGCTAAGCGCCAAATATGCGGTTTACATTGCCAAAGAGCAAGCCTCGGTTGAGCGGGTACGCAAAAT GGAAGATCGGCGCTTGCCTGCCGATTTGGATATTGAGGCGATTCCTAGCTTGCGAATCGAAGCCCGCCAAGTGCTCAAAC GCTTCCGCCCAGCAACCTTGGGCCAGGCATCACGCTTGGCAGGCATCAATCCTGCCGATATTGCCCATCTGCTGATTCAT CTCGAACGCCGCGAACGGGCGACGGTGGAGTAG
Upstream 100 bases:
>100_bases TGCGCTTCGTGTCCTTCGTGGTTAAAAACTGCCGATCCCCAAAATATCGAGTTTGCGGTACAATAAACTATCGTGTCCTT CACTTATGTCTTGTTGAGCT
Downstream 100 bases:
>100_bases AGTTTTGATCCACGAAGGACACGAAGCGCACTAAGTTTAGTTCAGTGGTTCTTTGGCATTAATTTAATTAAAGATGTCAA GCTCCCAGCGAATTCAACAT
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 650; Mature: 650
Protein sequence:
>650_residues MLNLTYDVVVVGGGHAGCEAALAAARMGSQTLLLTIDLDKLAHMSCNPSIGGPAKGNLVREIDALGGAMGVITDRTLIQI RLLNETKGPAVQALRAQSDKRLYAKAMKEFLEAQPNLALKQAMVERIIPLADQADGARFAVETQTGWQYRAKALVLTTGT FLRGRAITGESIIPAGRMGEQPAINLSSDLSQLGFPLVRLKTGTPPRIDARTIDFSGLEIQPGSSTPLYFGFNYDGQRPE SLVHGPPNPIYPEPMLDGWQPQLPCYHIYTTPEFHQHIRDNLHRAPMFSGVIEGVGPRYCPSIEDKIVRFADKESHGFFL EPEGWETLEIYVQGCNTSLPEDVQWAMLRSIPALRKVEIMRVGYAIEYDAVATGEITASLEAKRLPNLFFAGQINGTTGY EEAGAQGLMAGINAALKVAERAPFILRRDQAYIGVMIDDLVTKEIREPYRMFTSRAEHRLLLRGDNADLRLTPLAAELGL VSAERAAQVERKQWAIDQASQQLRGLRYTPSAETNGRLQAAGIEPLLQPASGEDILRRVGVKYAQLAEVQPDLPVVEADV AEQVELSAKYAVYIAKEQASVERVRKMEDRRLPADLDIEAIPSLRIEARQVLKRFRPATLGQASRLAGINPADIAHLLIH LERRERATVE
Sequences:
>Translated_650_residues MLNLTYDVVVVGGGHAGCEAALAAARMGSQTLLLTIDLDKLAHMSCNPSIGGPAKGNLVREIDALGGAMGVITDRTLIQI RLLNETKGPAVQALRAQSDKRLYAKAMKEFLEAQPNLALKQAMVERIIPLADQADGARFAVETQTGWQYRAKALVLTTGT FLRGRAITGESIIPAGRMGEQPAINLSSDLSQLGFPLVRLKTGTPPRIDARTIDFSGLEIQPGSSTPLYFGFNYDGQRPE SLVHGPPNPIYPEPMLDGWQPQLPCYHIYTTPEFHQHIRDNLHRAPMFSGVIEGVGPRYCPSIEDKIVRFADKESHGFFL EPEGWETLEIYVQGCNTSLPEDVQWAMLRSIPALRKVEIMRVGYAIEYDAVATGEITASLEAKRLPNLFFAGQINGTTGY EEAGAQGLMAGINAALKVAERAPFILRRDQAYIGVMIDDLVTKEIREPYRMFTSRAEHRLLLRGDNADLRLTPLAAELGL VSAERAAQVERKQWAIDQASQQLRGLRYTPSAETNGRLQAAGIEPLLQPASGEDILRRVGVKYAQLAEVQPDLPVVEADV AEQVELSAKYAVYIAKEQASVERVRKMEDRRLPADLDIEAIPSLRIEARQVLKRFRPATLGQASRLAGINPADIAHLLIH LERRERATVE >Mature_650_residues MLNLTYDVVVVGGGHAGCEAALAAARMGSQTLLLTIDLDKLAHMSCNPSIGGPAKGNLVREIDALGGAMGVITDRTLIQI RLLNETKGPAVQALRAQSDKRLYAKAMKEFLEAQPNLALKQAMVERIIPLADQADGARFAVETQTGWQYRAKALVLTTGT FLRGRAITGESIIPAGRMGEQPAINLSSDLSQLGFPLVRLKTGTPPRIDARTIDFSGLEIQPGSSTPLYFGFNYDGQRPE SLVHGPPNPIYPEPMLDGWQPQLPCYHIYTTPEFHQHIRDNLHRAPMFSGVIEGVGPRYCPSIEDKIVRFADKESHGFFL EPEGWETLEIYVQGCNTSLPEDVQWAMLRSIPALRKVEIMRVGYAIEYDAVATGEITASLEAKRLPNLFFAGQINGTTGY EEAGAQGLMAGINAALKVAERAPFILRRDQAYIGVMIDDLVTKEIREPYRMFTSRAEHRLLLRGDNADLRLTPLAAELGL VSAERAAQVERKQWAIDQASQQLRGLRYTPSAETNGRLQAAGIEPLLQPASGEDILRRVGVKYAQLAEVQPDLPVVEADV AEQVELSAKYAVYIAKEQASVERVRKMEDRRLPADLDIEAIPSLRIEARQVLKRFRPATLGQASRLAGINPADIAHLLIH LERRERATVE
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=658, Percent_Identity=41.0334346504559, Blast_Score=424, Evalue=1e-118, Organism=Homo sapiens, GI19882217, Length=683, Percent_Identity=39.5314787701318, Blast_Score=410, Evalue=1e-114, Organism=Homo sapiens, GI183227703, Length=698, Percent_Identity=38.6819484240688, Blast_Score=404, Evalue=1e-112, Organism=Escherichia coli, GI2367273, Length=641, Percent_Identity=49.4539781591264, Blast_Score=574, Evalue=1e-165, Organism=Caenorhabditis elegans, GI17534255, Length=644, Percent_Identity=36.1801242236025, Blast_Score=389, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6321202, Length=641, Percent_Identity=43.3697347893916, Blast_Score=489, Evalue=1e-139, Organism=Drosophila melanogaster, GI24658174, Length=658, Percent_Identity=41.6413373860182, Blast_Score=440, Evalue=1e-123,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 71571; Mature: 71571
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLTYDVVVVGGGHAGCEAALAAARMGSQTLLLTIDLDKLAHMSCNPSIGGPAKGNLVR CCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCHHH EIDALGGAMGVITDRTLIQIRLLNETKGPAVQALRAQSDKRLYAKAMKEFLEAQPNLALK HHHHHCCCEEEEECCEEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHH QAMVERIIPLADQADGARFAVETQTGWQYRAKALVLTTGTFLRGRAITGESIIPAGRMGE HHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEEEEECCEEECEECCCCCCCCCCCCCC QPAINLSSDLSQLGFPLVRLKTGTPPRIDARTIDFSGLEIQPGSSTPLYFGFNYDGQRPE CCCCCCHHHHHHHCCCEEEEECCCCCCCCEEEEECCCEEECCCCCCCEEEEECCCCCCCC SLVHGPPNPIYPEPMLDGWQPQLPCYHIYTTPEFHQHIRDNLHRAPMFSGVIEGVGPRYC HHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCHHHHHHHHCCCCCCC PSIEDKIVRFADKESHGFFLEPEGWETLEIYVQGCNTSLPEDVQWAMLRSIPALRKVEIM CCHHHHHHHHHCCCCCCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCHHHHEEEE RVGYAIEYDAVATGEITASLEAKRLPNLFFAGQINGTTGYEEAGAQGLMAGINAALKVAE EECEEEEECCEECCCEEECCHHHHCCCEEEEEEECCCCCCHHHCCHHHHHHHHHHHHHHH RAPFILRRDQAYIGVMIDDLVTKEIREPYRMFTSRAEHRLLLRGDNADLRLTPLAAELGL CCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHCC VSAERAAQVERKQWAIDQASQQLRGLRYTPSAETNGRLQAAGIEPLLQPASGEDILRRVG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHCCCCCCHHHHHHHC VKYAQLAEVQPDLPVVEADVAEQVELSAKYAVYIAKEQASVERVRKMEDRRLPADLDIEA CHHHHHHHCCCCCCEEEHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCHHC IPSLRIEARQVLKRFRPATLGQASRLAGINPADIAHLLIHLERRERATVE CCCCHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLNLTYDVVVVGGGHAGCEAALAAARMGSQTLLLTIDLDKLAHMSCNPSIGGPAKGNLVR CCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCHHH EIDALGGAMGVITDRTLIQIRLLNETKGPAVQALRAQSDKRLYAKAMKEFLEAQPNLALK HHHHHCCCEEEEECCEEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHH QAMVERIIPLADQADGARFAVETQTGWQYRAKALVLTTGTFLRGRAITGESIIPAGRMGE HHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEEEEECCEEECEECCCCCCCCCCCCCC QPAINLSSDLSQLGFPLVRLKTGTPPRIDARTIDFSGLEIQPGSSTPLYFGFNYDGQRPE CCCCCCHHHHHHHCCCEEEEECCCCCCCCEEEEECCCEEECCCCCCCEEEEECCCCCCCC SLVHGPPNPIYPEPMLDGWQPQLPCYHIYTTPEFHQHIRDNLHRAPMFSGVIEGVGPRYC HHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCHHHHHHHHCCCCCCC PSIEDKIVRFADKESHGFFLEPEGWETLEIYVQGCNTSLPEDVQWAMLRSIPALRKVEIM CCHHHHHHHHHCCCCCCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCHHHHEEEE RVGYAIEYDAVATGEITASLEAKRLPNLFFAGQINGTTGYEEAGAQGLMAGINAALKVAE EECEEEEECCEECCCEEECCHHHHCCCEEEEEEECCCCCCHHHCCHHHHHHHHHHHHHHH RAPFILRRDQAYIGVMIDDLVTKEIREPYRMFTSRAEHRLLLRGDNADLRLTPLAAELGL CCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHCC VSAERAAQVERKQWAIDQASQQLRGLRYTPSAETNGRLQAAGIEPLLQPASGEDILRRVG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHCCCCCCHHHHHHHC VKYAQLAEVQPDLPVVEADVAEQVELSAKYAVYIAKEQASVERVRKMEDRRLPADLDIEA CHHHHHHHCCCCCCEEEHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCHHC IPSLRIEARQVLKRFRPATLGQASRLAGINPADIAHLLIHLERRERATVE CCCCHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA