| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900262
Identifier: 159900262
GI number: 159900262
Start: 4708047
End: 4708550
Strand: Reverse
Name: 159900262
Synonym: Haur_3745
Alternate gene names: NA
Gene position: 4708550-4708047 (Counterclockwise)
Preceding gene: 159900263
Following gene: 159900261
Centisome position: 74.19
GC content: 53.77
Gene sequence:
>504_bases ATGGCATTGCAGCCAGATTCATCTGAGCAACCGACCCCAGCCGAAATCGCCCAACGTTTGGCCGATGTTCCCTTATTTGA ACAAATGCGACCCGACGATTTAGCATTCTTGGCTGATCACGCCACGATTCAGCAACTCGAGCCAGCGGTAGTGCTTTCAG CCCAACAATCCAGCGAAAACGATCTGTATGTGGTGGTGCGCGGTCATTTGGAAGTGTGGCTCGACCCAAGCAGCCTCGGA GCCGAAGGCCCAGAGCGTAAACTTGCCACCTTGTTTGCCGACGAAATTGCTGGTGAATTGGCGTTGGTCGATGGCGGTGT GCGTTCGGCGCGACTCCAAGCAGGCGATGCAGGCGTGCGGGTGATTTGCATTTCGCAGGCTGCAATTCTCAATCGTTGTG AGCAAGATCCAATTTTTGGTTATCGTTTGATGCGCAATTTAGCAGCAATGTTGGCCTTACGCGCCCGCCTGACTGCCTTG AGCGCTCAAACCAATATTGCCTAG
Upstream 100 bases:
>100_bases GACCGTTGGTCTGTCAGCATTGTACGCCAAAATTAGGCCAATGTTGCCGATCACTTCAAGAACCGCTAGAATACAGGCAT GAAGCTAGTTTGGAGGCCTT
Downstream 100 bases:
>100_bases TGAGGGGGATTGACGTATGCACCGTTGGCGGCTCGCCTTTGGGCTAGGGTTGATACTTATCTGTGTGAGTTGGGCGAGTT GGCGCTGGCAACCGGTTGCC
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MALQPDSSEQPTPAEIAQRLADVPLFEQMRPDDLAFLADHATIQQLEPAVVLSAQQSSENDLYVVVRGHLEVWLDPSSLG AEGPERKLATLFADEIAGELALVDGGVRSARLQAGDAGVRVICISQAAILNRCEQDPIFGYRLMRNLAAMLALRARLTAL SAQTNIA
Sequences:
>Translated_167_residues MALQPDSSEQPTPAEIAQRLADVPLFEQMRPDDLAFLADHATIQQLEPAVVLSAQQSSENDLYVVVRGHLEVWLDPSSLG AEGPERKLATLFADEIAGELALVDGGVRSARLQAGDAGVRVICISQAAILNRCEQDPIFGYRLMRNLAAMLALRARLTAL SAQTNIA >Mature_166_residues ALQPDSSEQPTPAEIAQRLADVPLFEQMRPDDLAFLADHATIQQLEPAVVLSAQQSSENDLYVVVRGHLEVWLDPSSLGA EGPERKLATLFADEIAGELALVDGGVRSARLQAGDAGVRVICISQAAILNRCEQDPIFGYRLMRNLAAMLALRARLTALS AQTNIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18018; Mature: 17887
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQPDSSEQPTPAEIAQRLADVPLFEQMRPDDLAFLADHATIQQLEPAVVLSAQQSSEN CCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC DLYVVVRGHLEVWLDPSSLGAEGPERKLATLFADEIAGELALVDGGVRSARLQAGDAGVR CEEEEEECCEEEEECCHHCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCEEEECCCCCEE VICISQAAILNRCEQDPIFGYRLMRNLAAMLALRARLTALSAQTNIA EEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ALQPDSSEQPTPAEIAQRLADVPLFEQMRPDDLAFLADHATIQQLEPAVVLSAQQSSEN CCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC DLYVVVRGHLEVWLDPSSLGAEGPERKLATLFADEIAGELALVDGGVRSARLQAGDAGVR CEEEEEECCEEEEECCHHCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCEEEECCCCCEE VICISQAAILNRCEQDPIFGYRLMRNLAAMLALRARLTALSAQTNIA EEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA