| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900261
Identifier: 159900261
GI number: 159900261
Start: 4706942
End: 4708030
Strand: Reverse
Name: 159900261
Synonym: Haur_3744
Alternate gene names: NA
Gene position: 4708030-4706942 (Counterclockwise)
Preceding gene: 159900262
Following gene: 159900260
Centisome position: 74.18
GC content: 54.73
Gene sequence:
>1089_bases ATGCACCGTTGGCGGCTCGCCTTTGGGCTAGGGTTGATACTTATCTGTGTGAGTTGGGCGAGTTGGCGCTGGCAACCGGT TGCCGCCCAAAACCCCGAAGATGATGATCAGCCGCCTGCCGTTGAACAACCATTGTGTTTTTCGAGCACTGGGTTGTGTA TCAACGGGGCATTTCGGCGCTATTGGGAGACCAACGGCGGTCTAAGTCAATTCGGCTATCCAATTACTGCTGAAATTCGT GAAACAACCAGTAACGGCATTTTTACCGTGCAATATTTCGAGCGAGCACGCTTTGAATATCATCCTGAGCACTCGCGCCA GTTCGAGGTGCAGCTTGGGCGTTTGGGGGCAGAACTCTATCGCATCGCCCATGAACGCGAAACTGCCCGCGCTGGTTGCC GCTATTTCGAGCGCACTGGCTTTAATGTTTGTGAGCCGTTTCGTACCAAATGGGAAACTGTGGGCACAACGCCAGGTGCA ACCAGCCTCGAAATTTATGGCTTGCCAATCAGTCCGTTGCTGGTTGGCCGTGATCCTGCTGGCAACCCAATTTCGTTTCA ATGGTTCGAGCGGGGCCGCATGGAATTGCACCAAAGCAATTTGGTCGTGCTAGGGTTGGTTGGGGTTGAATATCGCCAAC GCGAGCAAGAGCCACGCCCAACCCCAACCCCGACGATCCCAGTTGTGCCAACTCCAGCGCCAATCGAGCCAACCGCCATT CCAACTGCGGTTCTGCCGATTCCAATCAATGTGCCATTCCCCGATCGGCCTTGTCATATCAATGTGCCAGCGCCAATCGA GGGCCTTCAAGCATGGGCCACCTTGCCCGTGGTCAGCCCGCCCGAGGATGAAGTGATTTGTGTGCGCTTGATCGTCAATG GCGAGGCGGCGCATCCAGCATTTGTCAATATCTACCGCTATATTGGCAGCGAACGGATTCCAGGCACCGGCCATACAACT GGGCTTGATGGCACTGCCAGTTTTGTGTTCCATGTGCGCGATCTGCCGATTGGCACGATTCCGGTTGAAGTGGTTGCGAC CTTTGAAGGCCGCGAATATCGCACTTGGACGAGTTTTATTCATCGCTAG
Upstream 100 bases:
>100_bases TATCGTTTGATGCGCAATTTAGCAGCAATGTTGGCCTTACGCGCCCGCCTGACTGCCTTGAGCGCTCAAACCAATATTGC CTAGTGAGGGGGATTGACGT
Downstream 100 bases:
>100_bases CGTTATCACGATTGATCGATGGAACGACGCTGGGGTGAGCTTACCTCAGCGTCGTTGCGATCTTTAGAAGATAGTAATTA TGGAAGCGAAAACCTTACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MHRWRLAFGLGLILICVSWASWRWQPVAAQNPEDDDQPPAVEQPLCFSSTGLCINGAFRRYWETNGGLSQFGYPITAEIR ETTSNGIFTVQYFERARFEYHPEHSRQFEVQLGRLGAELYRIAHERETARAGCRYFERTGFNVCEPFRTKWETVGTTPGA TSLEIYGLPISPLLVGRDPAGNPISFQWFERGRMELHQSNLVVLGLVGVEYRQREQEPRPTPTPTIPVVPTPAPIEPTAI PTAVLPIPINVPFPDRPCHINVPAPIEGLQAWATLPVVSPPEDEVICVRLIVNGEAAHPAFVNIYRYIGSERIPGTGHTT GLDGTASFVFHVRDLPIGTIPVEVVATFEGREYRTWTSFIHR
Sequences:
>Translated_362_residues MHRWRLAFGLGLILICVSWASWRWQPVAAQNPEDDDQPPAVEQPLCFSSTGLCINGAFRRYWETNGGLSQFGYPITAEIR ETTSNGIFTVQYFERARFEYHPEHSRQFEVQLGRLGAELYRIAHERETARAGCRYFERTGFNVCEPFRTKWETVGTTPGA TSLEIYGLPISPLLVGRDPAGNPISFQWFERGRMELHQSNLVVLGLVGVEYRQREQEPRPTPTPTIPVVPTPAPIEPTAI PTAVLPIPINVPFPDRPCHINVPAPIEGLQAWATLPVVSPPEDEVICVRLIVNGEAAHPAFVNIYRYIGSERIPGTGHTT GLDGTASFVFHVRDLPIGTIPVEVVATFEGREYRTWTSFIHR >Mature_362_residues MHRWRLAFGLGLILICVSWASWRWQPVAAQNPEDDDQPPAVEQPLCFSSTGLCINGAFRRYWETNGGLSQFGYPITAEIR ETTSNGIFTVQYFERARFEYHPEHSRQFEVQLGRLGAELYRIAHERETARAGCRYFERTGFNVCEPFRTKWETVGTTPGA TSLEIYGLPISPLLVGRDPAGNPISFQWFERGRMELHQSNLVVLGLVGVEYRQREQEPRPTPTPTIPVVPTPAPIEPTAI PTAVLPIPINVPFPDRPCHINVPAPIEGLQAWATLPVVSPPEDEVICVRLIVNGEAAHPAFVNIYRYIGSERIPGTGHTT GLDGTASFVFHVRDLPIGTIPVEVVATFEGREYRTWTSFIHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40653; Mature: 40653
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRWRLAFGLGLILICVSWASWRWQPVAAQNPEDDDQPPAVEQPLCFSSTGLCINGAFRR CCEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCEEECHHHH YWETNGGLSQFGYPITAEIRETTSNGIFTVQYFERARFEYHPEHSRQFEVQLGRLGAELY HHCCCCCHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHH RIAHERETARAGCRYFERTGFNVCEPFRTKWETVGTTPGATSLEIYGLPISPLLVGRDPA HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCEEEECCCC GNPISFQWFERGRMELHQSNLVVLGLVGVEYRQREQEPRPTPTPTIPVVPTPAPIEPTAI CCCCEEHHHHCCHHEEECCCEEEEEEECCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCC PTAVLPIPINVPFPDRPCHINVPAPIEGLQAWATLPVVSPPEDEVICVRLIVNGEAAHPA CEEEEEEEEECCCCCCCEEEECCCCHHHHHHHEECCCCCCCCCCEEEEEEEECCCCCCHH FVNIYRYIGSERIPGTGHTTGLDGTASFVFHVRDLPIGTIPVEVVATFEGREYRTWTSFI HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEHHHHHH HR CC >Mature Secondary Structure MHRWRLAFGLGLILICVSWASWRWQPVAAQNPEDDDQPPAVEQPLCFSSTGLCINGAFRR CCEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCEEECHHHH YWETNGGLSQFGYPITAEIRETTSNGIFTVQYFERARFEYHPEHSRQFEVQLGRLGAELY HHCCCCCHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHH RIAHERETARAGCRYFERTGFNVCEPFRTKWETVGTTPGATSLEIYGLPISPLLVGRDPA HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCEEEECCCC GNPISFQWFERGRMELHQSNLVVLGLVGVEYRQREQEPRPTPTPTIPVVPTPAPIEPTAI CCCCEEHHHHCCHHEEECCCEEEEEEECCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCC PTAVLPIPINVPFPDRPCHINVPAPIEGLQAWATLPVVSPPEDEVICVRLIVNGEAAHPA CEEEEEEEEECCCCCCCEEEECCCCHHHHHHHEECCCCCCCCCCEEEEEEEECCCCCCHH FVNIYRYIGSERIPGTGHTTGLDGTASFVFHVRDLPIGTIPVEVVATFEGREYRTWTSFI HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEHHHHHH HR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA