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The map label for this gene is lcnDR2 [H]

Identifier: 159900255

GI number: 159900255

Start: 4697449

End: 4699284

Strand: Reverse

Name: lcnDR2 [H]

Synonym: Haur_3738

Alternate gene names: 159900255

Gene position: 4699284-4697449 (Counterclockwise)

Preceding gene: 159900256

Following gene: 159900254

Centisome position: 74.04

GC content: 53.16

Gene sequence:

>1836_bases
ATGAATTGGTTGGCAAGCCTGAATCTACGCGAGCGCCGATCGCTTGGTTTGAGCGAGCTTGGCGCTCGAACCAGCTCGCG
TTACCAACGTTGGCGCAAGCAAGCCCCATTCGAGCAAACGCTCTGGTGGCAGGCACGGCTGGCGCTGGATGGATTGGATG
ATCTGCAATTCCAAGCTTTGCTTGATCCCGCCGTTGTGGTTGCTGCTCCGCCATGGGCCGAAACCCTCACAGCATGGCGC
GAATGGCAAGCTCGTCCGCATCCACGCTGGCTCAACCAACCAAACTTGGGCTATCCACTCTGGCCAATCGTCGATTATTG
CCTAGCGCACATTGAACAAGCCTTGCAACAAGCACAGGTTAAACATGCTTGGCCGAGCTTGCAGGCGGCGATTGGCAAGG
CGCTCGTGCAACGTTTAGCCCAATTAACTGCCCAAACCATGGTGCTTGAGCTGAATGTAGCCCGTTTGCGCGGCCAACTC
CACGGGGCGACCAGCCAAGATCGCTTTGAATATTTTATCAAACGTTATAGCCAGATCGGCGATTTGCTCGATCTATTGGC
TGATTATCCAGTGTTGCTGCGGAGTTTGGTGCACGAATGCCAAACGACGATTAATTTTATCAGCCAAATTGCCCAACATC
TCGCCCACGATTGGCAGCAACTTCAACAGCATTTTGGGCTTGAACTTGCCGAATGGACAGGCTTGGAAAGCTTGGGCGAT
CGCCATGCGGGCAAGAGTGTTTGCCGCTTGGATTTTGCCAGTGGCCAACATTTGGCCTACAAACCGCGTTCGCTGAGCAC
CGAAGTTGCCTTTAATCAGGTTTTAGCGTGGCACAACCAACAACCGCAAACCATCCAATTACGTGGTTTGAAGGTGCTCG
ATTGTGGCAATTATGGCTGGACAGAATGGTTGCAAGCCTTGCCATGTGCCGATGCGGCGGCGGTACGGCGTTTTTTTCAA
CGCCATGGAGCATTATTGGCCTTGCTTTTGGTGTTACAAGCTTGCGATGTGCATTATGAAAATGTGATTGCCGTCGGCGA
ATATCCGGTCTTGATTGACCTCGAAGGCTTGTGCCATCCCCTATTATTGAGCAACACCAACGAATTGATCGAGGCTGAAC
AAGTTGGCTTGTTACCACGCTTGCACTTTGCCACCGAGCAACATCCTGGGGTCGATATGAGTGGCATCGCGGGCAATGCC
GAGCAAACCCTGCCCTTGCCTCAGCCAGTGTGGGATGAGACCAATACTGATCAAATGGCTTTGCGCTATGCCCCGACCGC
TGTGCCAGCTGCCCACAATCTACCAACCTGTAGCAAGCTCCTGATTGATCCGCTAGACTATGCCGCTGAGGTTGAGCAAG
GCTTCCGCACCACCTATTTATGCTTGTTGAGTGCCAAAGCCGAGTTGTTGAGCAAGATTCTCGCCGTTTGTGCCGATACC
ACGATTCGGGTGATTGCCCGTCCATCAAATAGTTATGCGATTTTACTGCGCCATGCCAGCCATCCCAATCGGCTGCGCGA
TGCAGTTGATCGCGATTGCTTGTTTGACCATTTGTGGCTAAGCATCCCTGAGCGACCGCATTTGAAGCCGTTTCTGCAAA
CAGAGCAAACTGCACTGTGGCAAGGCGATATTCCATGGTTTGGCACGACCCCACGTTCGCAAACCATTTGGGATGCCAAC
GGCCAAACATTGCCATTTGAACTCGCCCAAAGCAGTTGGCAACGGGTCGAACTAGCGGTCGAGCGCCTGAGCCTTGACGA
TTGCGCAAGCCAAATCGCCCAAATTCGCCATGCTTTTGGGACTAATGCTTCACCCAAATCGCCCCAGCAGCCATGA

Upstream 100 bases:

>100_bases
AGGCTCTAGCACAGCCTGATCAATCAAACTTGCCAGCCGAGCCAATTGTTGCCCAATTACTCGACCAGATGCCTAGCCTG
AAACTGCGTGAGCTGCGCAC

Downstream 100 bases:

>100_bases
TATACTGAGCCTAGTAGCCCTGCTACCAACTCCCTGAAACTTCAAACAACCCACCTTGGCTGGCATGTGCCAGTCATCGT
TTTGGTGCACATACAAAGGA

Product: lanthionine synthetase C-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MNWLASLNLRERRSLGLSELGARTSSRYQRWRKQAPFEQTLWWQARLALDGLDDLQFQALLDPAVVVAAPPWAETLTAWR
EWQARPHPRWLNQPNLGYPLWPIVDYCLAHIEQALQQAQVKHAWPSLQAAIGKALVQRLAQLTAQTMVLELNVARLRGQL
HGATSQDRFEYFIKRYSQIGDLLDLLADYPVLLRSLVHECQTTINFISQIAQHLAHDWQQLQQHFGLELAEWTGLESLGD
RHAGKSVCRLDFASGQHLAYKPRSLSTEVAFNQVLAWHNQQPQTIQLRGLKVLDCGNYGWTEWLQALPCADAAAVRRFFQ
RHGALLALLLVLQACDVHYENVIAVGEYPVLIDLEGLCHPLLLSNTNELIEAEQVGLLPRLHFATEQHPGVDMSGIAGNA
EQTLPLPQPVWDETNTDQMALRYAPTAVPAAHNLPTCSKLLIDPLDYAAEVEQGFRTTYLCLLSAKAELLSKILAVCADT
TIRVIARPSNSYAILLRHASHPNRLRDAVDRDCLFDHLWLSIPERPHLKPFLQTEQTALWQGDIPWFGTTPRSQTIWDAN
GQTLPFELAQSSWQRVELAVERLSLDDCASQIAQIRHAFGTNASPKSPQQP

Sequences:

>Translated_611_residues
MNWLASLNLRERRSLGLSELGARTSSRYQRWRKQAPFEQTLWWQARLALDGLDDLQFQALLDPAVVVAAPPWAETLTAWR
EWQARPHPRWLNQPNLGYPLWPIVDYCLAHIEQALQQAQVKHAWPSLQAAIGKALVQRLAQLTAQTMVLELNVARLRGQL
HGATSQDRFEYFIKRYSQIGDLLDLLADYPVLLRSLVHECQTTINFISQIAQHLAHDWQQLQQHFGLELAEWTGLESLGD
RHAGKSVCRLDFASGQHLAYKPRSLSTEVAFNQVLAWHNQQPQTIQLRGLKVLDCGNYGWTEWLQALPCADAAAVRRFFQ
RHGALLALLLVLQACDVHYENVIAVGEYPVLIDLEGLCHPLLLSNTNELIEAEQVGLLPRLHFATEQHPGVDMSGIAGNA
EQTLPLPQPVWDETNTDQMALRYAPTAVPAAHNLPTCSKLLIDPLDYAAEVEQGFRTTYLCLLSAKAELLSKILAVCADT
TIRVIARPSNSYAILLRHASHPNRLRDAVDRDCLFDHLWLSIPERPHLKPFLQTEQTALWQGDIPWFGTTPRSQTIWDAN
GQTLPFELAQSSWQRVELAVERLSLDDCASQIAQIRHAFGTNASPKSPQQP
>Mature_611_residues
MNWLASLNLRERRSLGLSELGARTSSRYQRWRKQAPFEQTLWWQARLALDGLDDLQFQALLDPAVVVAAPPWAETLTAWR
EWQARPHPRWLNQPNLGYPLWPIVDYCLAHIEQALQQAQVKHAWPSLQAAIGKALVQRLAQLTAQTMVLELNVARLRGQL
HGATSQDRFEYFIKRYSQIGDLLDLLADYPVLLRSLVHECQTTINFISQIAQHLAHDWQQLQQHFGLELAEWTGLESLGD
RHAGKSVCRLDFASGQHLAYKPRSLSTEVAFNQVLAWHNQQPQTIQLRGLKVLDCGNYGWTEWLQALPCADAAAVRRFFQ
RHGALLALLLVLQACDVHYENVIAVGEYPVLIDLEGLCHPLLLSNTNELIEAEQVGLLPRLHFATEQHPGVDMSGIAGNA
EQTLPLPQPVWDETNTDQMALRYAPTAVPAAHNLPTCSKLLIDPLDYAAEVEQGFRTTYLCLLSAKAELLSKILAVCADT
TIRVIARPSNSYAILLRHASHPNRLRDAVDRDCLFDHLWLSIPERPHLKPFLQTEQTALWQGDIPWFGTTPRSQTIWDAN
GQTLPFELAQSSWQRVELAVERLSLDDCASQIAQIRHAFGTNASPKSPQQP

Specific function: Could be implicated in the processing or the export process of the lantibiotic lacticin 481/lactococcin DR [H]

COG id: COG4403

COG function: function code V; Lantibiotic modifying enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007822
- InterPro:   IPR017146 [H]

Pfam domain/function: PF05147 LANC_like [H]

EC number: NA

Molecular weight: Translated: 69002; Mature: 69002

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLASLNLRERRSLGLSELGARTSSRYQRWRKQAPFEQTLWWQARLALDGLDDLQFQAL
CCCCCCCCHHHHHCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH
LDPAVVVAAPPWAETLTAWREWQARPHPRWLNQPNLGYPLWPIVDYCLAHIEQALQQAQV
CCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KHAWPSLQAAIGKALVQRLAQLTAQTMVLELNVARLRGQLHGATSQDRFEYFIKRYSQIG
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
DLLDLLADYPVLLRSLVHECQTTINFISQIAQHLAHDWQQLQQHFGLELAEWTGLESLGD
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHH
RHAGKSVCRLDFASGQHLAYKPRSLSTEVAFNQVLAWHNQQPQTIQLRGLKVLDCGNYGW
HHCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEECCCCCH
TEWLQALPCADAAAVRRFFQRHGALLALLLVLQACDVHYENVIAVGEYPVLIDLEGLCHP
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCEEEECCCCEEEECCHHHCH
LLLSNTNELIEAEQVGLLPRLHFATEQHPGVDMSGIAGNAEQTLPLPQPVWDETNTDQMA
HHHCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
LRYAPTAVPAAHNLPTCSKLLIDPLDYAAEVEQGFRTTYLCLLSAKAELLSKILAVCADT
EEECCCCCCCCCCCCHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
TIRVIARPSNSYAILLRHASHPNRLRDAVDRDCLFDHLWLSIPERPHLKPFLQTEQTALW
CEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHEE
QGDIPWFGTTPRSQTIWDANGQTLPFELAQSSWQRVELAVERLSLDDCASQIAQIRHAFG
CCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
TNASPKSPQQP
CCCCCCCCCCC
>Mature Secondary Structure
MNWLASLNLRERRSLGLSELGARTSSRYQRWRKQAPFEQTLWWQARLALDGLDDLQFQAL
CCCCCCCCHHHHHCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH
LDPAVVVAAPPWAETLTAWREWQARPHPRWLNQPNLGYPLWPIVDYCLAHIEQALQQAQV
CCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KHAWPSLQAAIGKALVQRLAQLTAQTMVLELNVARLRGQLHGATSQDRFEYFIKRYSQIG
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
DLLDLLADYPVLLRSLVHECQTTINFISQIAQHLAHDWQQLQQHFGLELAEWTGLESLGD
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHH
RHAGKSVCRLDFASGQHLAYKPRSLSTEVAFNQVLAWHNQQPQTIQLRGLKVLDCGNYGW
HHCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEECCCCCH
TEWLQALPCADAAAVRRFFQRHGALLALLLVLQACDVHYENVIAVGEYPVLIDLEGLCHP
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCEEEECCCCEEEECCHHHCH
LLLSNTNELIEAEQVGLLPRLHFATEQHPGVDMSGIAGNAEQTLPLPQPVWDETNTDQMA
HHHCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
LRYAPTAVPAAHNLPTCSKLLIDPLDYAAEVEQGFRTTYLCLLSAKAELLSKILAVCADT
EEECCCCCCCCCCCCHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
TIRVIARPSNSYAILLRHASHPNRLRDAVDRDCLFDHLWLSIPERPHLKPFLQTEQTALW
CEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHEE
QGDIPWFGTTPRSQTIWDANGQTLPFELAQSSWQRVELAVERLSLDDCASQIAQIRHAFG
CCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
TNASPKSPQQP
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8017945 [H]