| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900226
Identifier: 159900226
GI number: 159900226
Start: 4664340
End: 4665710
Strand: Reverse
Name: 159900226
Synonym: Haur_3709
Alternate gene names: NA
Gene position: 4665710-4664340 (Counterclockwise)
Preceding gene: 159900227
Following gene: 159900225
Centisome position: 73.52
GC content: 52.37
Gene sequence:
>1371_bases ATGCGCACAATTATGTGGATTAAGAATCATCGTTGGCTGAGTTCGTTATTGGTAGCCGTGGTTTGCCTTGGTTTAGGCGG GCTGGCAGGTTTGATGCCGTTGCGCTATTTGGCAGGCGTAGCCTTTTGCCTTGGCCTAACCGCAATTGGTTATGCTTGGG TTTGGCTAATTAGCAAGCCCGACGAGTTGCGGGGTATGCTGCTGCTCTGTTTTGCAGCGATGGGCCTGCGTTGGGGAGCC AGCTTTGCGCTCGAATTTCTCTGGCCCAGTTTTGAATCGCTGAGTGATGGCGCAGCGTATGGCCCGCATGCCATGACGAT TGCCCAAGCTTGGAACGCTAATTATTTCGCTAGTTACGAGGCGGTGGTTTCAACCCCGGTTGGTGCGCCGGGCTATGTTT ATTTTTCGGCAGTAATTTTTTGGTTATTTGGGCCAAATACCTTGCTGGTAAAATTGGCTAATGGCTTGTTTGCTGGCATG GCGGCGGTGTACACGGCCAAATTAGGCAACCATTTTTTCGATCAACGGGTTGGGCGGTTTGCCGCGTTGTGGATGTTAAT TATGCCATCGCTGATTTTGTGGACTTCGCAAAATCTCAAAGATAGCGCGGTGGTGCTGCTCTCAGTCTGGATTTTGTATG TAGCCAGTCAAGGTTTGCGCTCGTCGTTATGGCAAATTCCATTGTTGGTGCTGCTGATTGGGGCGTTGATGAGCGTGCGG CGCGAAACCTCAATTGGCATTGCTTTGATGATTGCCTTGACAATTGGCTTTCAGCAAACCCGTCATTGGCTAACCCGCCT GAGCTTGAGCGCGATCACGATTGTGGCCTTGGGCTTGGTGCTTTCGAGCAGCGGCTATGGCTTTTTGGGCAGCGATTATC TGCAAGAGCGGCTTTCGCTCAGCGCAATTAGCGAAAAACGCGAGGCCAACTCAACCGGCACAGGCACAATTGAAAATACG ATTGATACGACCACGCCGCTGGGTTTTGCCCGCTACTTGCCAATTGCCTTGATTAATTTCTGGTTGCGACCGTGGCCGTG GGAAGCTACCAAGAGCACCGCCCAATTGCTGACCATTCCCGAAGCGGCGCTGTTGTGGTATCCGTTGTGGGTTTTGGCGA TGATTGGCATGATCTTGGCGTGGCGTAGCCGTTGGCGCGAAACAATGTTGCTCTGGCTCTATCTGCTGGCTGGCAGTGCG GCGGCGGCTCCGCAGTATGGCAATTTTGGCACGGCCTATCGCCATCGGGTGCAGCTGTGGCCAATTTTCTTTTTGTTTGC AGGCTATTGTTGGTATCGTTGGCGCGATGCTAGAGTTGAGCAACGTCAGGCGTTGTTGACCCGCTATGTGCAGAGTATCA AGCAAATTTAG
Upstream 100 bases:
>100_bases TGCCACGCGCATTGGGCTGGTACAATGAACGCTGGACATCAACTTTGGACATTGCTCACCTTAGAATTATGGCTACAAAC TCATCACCAAATGAGGCCAT
Downstream 100 bases:
>100_bases GCTGTAGGCTGATGGCTATCGGCTATCGGAACGATGATGATCATTCCAATGATCGGCAATTCAAAAGCCAATAGCCCATA GCCGATAGCCTATAACGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MRTIMWIKNHRWLSSLLVAVVCLGLGGLAGLMPLRYLAGVAFCLGLTAIGYAWVWLISKPDELRGMLLLCFAAMGLRWGA SFALEFLWPSFESLSDGAAYGPHAMTIAQAWNANYFASYEAVVSTPVGAPGYVYFSAVIFWLFGPNTLLVKLANGLFAGM AAVYTAKLGNHFFDQRVGRFAALWMLIMPSLILWTSQNLKDSAVVLLSVWILYVASQGLRSSLWQIPLLVLLIGALMSVR RETSIGIALMIALTIGFQQTRHWLTRLSLSAITIVALGLVLSSSGYGFLGSDYLQERLSLSAISEKREANSTGTGTIENT IDTTTPLGFARYLPIALINFWLRPWPWEATKSTAQLLTIPEAALLWYPLWVLAMIGMILAWRSRWRETMLLWLYLLAGSA AAAPQYGNFGTAYRHRVQLWPIFFLFAGYCWYRWRDARVEQRQALLTRYVQSIKQI
Sequences:
>Translated_456_residues MRTIMWIKNHRWLSSLLVAVVCLGLGGLAGLMPLRYLAGVAFCLGLTAIGYAWVWLISKPDELRGMLLLCFAAMGLRWGA SFALEFLWPSFESLSDGAAYGPHAMTIAQAWNANYFASYEAVVSTPVGAPGYVYFSAVIFWLFGPNTLLVKLANGLFAGM AAVYTAKLGNHFFDQRVGRFAALWMLIMPSLILWTSQNLKDSAVVLLSVWILYVASQGLRSSLWQIPLLVLLIGALMSVR RETSIGIALMIALTIGFQQTRHWLTRLSLSAITIVALGLVLSSSGYGFLGSDYLQERLSLSAISEKREANSTGTGTIENT IDTTTPLGFARYLPIALINFWLRPWPWEATKSTAQLLTIPEAALLWYPLWVLAMIGMILAWRSRWRETMLLWLYLLAGSA AAAPQYGNFGTAYRHRVQLWPIFFLFAGYCWYRWRDARVEQRQALLTRYVQSIKQI >Mature_456_residues MRTIMWIKNHRWLSSLLVAVVCLGLGGLAGLMPLRYLAGVAFCLGLTAIGYAWVWLISKPDELRGMLLLCFAAMGLRWGA SFALEFLWPSFESLSDGAAYGPHAMTIAQAWNANYFASYEAVVSTPVGAPGYVYFSAVIFWLFGPNTLLVKLANGLFAGM AAVYTAKLGNHFFDQRVGRFAALWMLIMPSLILWTSQNLKDSAVVLLSVWILYVASQGLRSSLWQIPLLVLLIGALMSVR RETSIGIALMIALTIGFQQTRHWLTRLSLSAITIVALGLVLSSSGYGFLGSDYLQERLSLSAISEKREANSTGTGTIENT IDTTTPLGFARYLPIALINFWLRPWPWEATKSTAQLLTIPEAALLWYPLWVLAMIGMILAWRSRWRETMLLWLYLLAGSA AAAPQYGNFGTAYRHRVQLWPIFFLFAGYCWYRWRDARVEQRQALLTRYVQSIKQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51085; Mature: 51085
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIMWIKNHRWLSSLLVAVVCLGLGGLAGLMPLRYLAGVAFCLGLTAIGYAWVWLISKP CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC DELRGMLLLCFAAMGLRWGASFALEFLWPSFESLSDGAAYGPHAMTIAQAWNANYFASYE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHCCCHHHHHH AVVSTPVGAPGYVYFSAVIFWLFGPNTLLVKLANGLFAGMAAVYTAKLGNHFFDQRVGRF HHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALWMLIMPSLILWTSQNLKDSAVVLLSVWILYVASQGLRSSLWQIPLLVLLIGALMSVR HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RETSIGIALMIALTIGFQQTRHWLTRLSLSAITIVALGLVLSSSGYGFLGSDYLQERLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH SAISEKREANSTGTGTIENTIDTTTPLGFARYLPIALINFWLRPWPWEATKSTAQLLTIP HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHCCC EAALLWYPLWVLAMIGMILAWRSRWRETMLLWLYLLAGSAAAAPQYGNFGTAYRHRVQLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH PIFFLFAGYCWYRWRDARVEQRQALLTRYVQSIKQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRTIMWIKNHRWLSSLLVAVVCLGLGGLAGLMPLRYLAGVAFCLGLTAIGYAWVWLISKP CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC DELRGMLLLCFAAMGLRWGASFALEFLWPSFESLSDGAAYGPHAMTIAQAWNANYFASYE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHCCCHHHHHH AVVSTPVGAPGYVYFSAVIFWLFGPNTLLVKLANGLFAGMAAVYTAKLGNHFFDQRVGRF HHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALWMLIMPSLILWTSQNLKDSAVVLLSVWILYVASQGLRSSLWQIPLLVLLIGALMSVR HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RETSIGIALMIALTIGFQQTRHWLTRLSLSAITIVALGLVLSSSGYGFLGSDYLQERLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH SAISEKREANSTGTGTIENTIDTTTPLGFARYLPIALINFWLRPWPWEATKSTAQLLTIP HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHCCC EAALLWYPLWVLAMIGMILAWRSRWRETMLLWLYLLAGSAAAAPQYGNFGTAYRHRVQLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH PIFFLFAGYCWYRWRDARVEQRQALLTRYVQSIKQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA