Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900215

Identifier: 159900215

GI number: 159900215

Start: 4651088

End: 4652641

Strand: Reverse

Name: 159900215

Synonym: Haur_3698

Alternate gene names: NA

Gene position: 4652641-4651088 (Counterclockwise)

Preceding gene: 159900222

Following gene: 159900214

Centisome position: 73.31

GC content: 51.48

Gene sequence:

>1554_bases
ATGCGTTCTTTGAAATATATAAGTCTGGCGTTATTACTCGTGGCCTGCGGTGGTCAAAGCCCTGCAACGACCACGCCAGC
AGCAACCACCAATTTACCAGCCCAAGCCACCGCCACCATCCAAACTGGCTCAGCAGCAACTACTATTCCAACAACCGTGC
CCCAAGCAACGGGTATGCCGCAAGCAACGGTTGCTACGGCCAACCAAATTAATTTAAGTGCGCCGCCTGTGGATGCGGTG
TTGACCGATTCGGTGCGCGTGGCTGGCACGATCGTGCTTACCCCATTCGAAAAAACCTTGCGCCTCGTGATTCAAACCAA
CGACGGCAACATTCTGTATGAGGGGCCAATTAATACCACTGGCGAATATGGCAGCAGCGCAACCTTCGATGTGACCGTGC
CAATCGTCGCAGCAGCAAGCGGCCCAGGTGTGATCAAGGTGATCGAAGATGATATGAGCGGTGAATTGCCCTATCGCACA
ATTGCCGAGCAACCAGTCCAATTTACTTCGACTTCTGCCGAACCGACGCCTGCCGAGCCAGGAATTTTGATCGAATTGAC
TGAACCAGCGATGCATGCGGTCGTTGGCAATCCATTGAATTTCAAAGGCACGCTCTCGGCAATGCCCTTTGAAAAAAATG
TCGTGATCGAAGTCTATGATAGTGAATTGCATTTGCTCGGTCAAACCAGCGTGATTGCCGATGGCGAATATGGCTCGGCT
GGAACATTCAGCGGCAGTATCAATTTTCAAGCCCCCTTGAGTAGCCGCATCGGTCGGATTGTGGCCTATACAACCTCGCC
CAAGGATGGTTCAGTCGTTGGGCGTGACGAAGCAACTCTGACGTTGCCTGCTTGGAATGGCACAGGCGCATATTTGGCCC
AACCTGCGCCCGAAACCAGTGCCTTCTTGCCTTTGCATGTTGAAGCCGTTGGTTTAAGCAGCGATACTTACACTGTGCGT
TTGCGCTACGCCGATGGCACCCTGTTGGAAAACACTACCCAAGCCTACAACGGGTATTTGGCCTTGAGTTTGATGTGGGA
CAATGCTGCACCCATTTTACCCAACCAAAGCGCAATTTTAGAGTTGGTCAAGGCTGATGGCACAGTTGAGTTGACCCAAA
ATCTGTATATGCAAGATCTAACCAGCCAACCGACTACGAGTGTCGAAGTCTCTTGGTTAGCTGGCGAAGGCTCGATCAAT
GGGATTCGGATTTTACCAAAAACCTCAAGTGTCGCCAGCGCTGCCTTACGCGAGTTAGTTTGGGGTCCAGTTGGCAAAGA
TTCAGCCTATAGCACAGCGATTCCTAGCCCTAAAATTATTGCCGATTACACTGGTGATAAAACTGGCTGGACTGGGCGGG
TGCATCTGCGCTCAGTGCGGATCGAAGGCGATATCGCCTACGTCGATTGGAGTCGCGAAATGCGAGCATGGGGCGGTGGG
TCAATGCAACTTGAATCACTGCAAGCTCAAGTTGACCTAACGCTCAAGCAATTTTCTCAAGTCAAGCAGGTTGTTATGAC
GGTTGAAGGCAGTGAAGAAGTGCTCCAACCATAA

Upstream 100 bases:

>100_bases
CCTAACTGCTTCATCCTTTTATCAGATGGGCCTCAGTTGCCAGCCATGGCCTGAAATATGATTAACCGCTAGAGTAAGGG
TGTATCTGAAGGAGGATTCA

Downstream 100 bases:

>100_bases
AAATCTATAGGCAAAGTAGGGTTGCTCGTGATAGCATATAGTCAAGTGGTTTTGTTGCTACGAGTAACCCTATGTTGCAA
TCGCAAGCCCAACGTTGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MRSLKYISLALLLVACGGQSPATTTPAATTNLPAQATATIQTGSAATTIPTTVPQATGMPQATVATANQINLSAPPVDAV
LTDSVRVAGTIVLTPFEKTLRLVIQTNDGNILYEGPINTTGEYGSSATFDVTVPIVAAASGPGVIKVIEDDMSGELPYRT
IAEQPVQFTSTSAEPTPAEPGILIELTEPAMHAVVGNPLNFKGTLSAMPFEKNVVIEVYDSELHLLGQTSVIADGEYGSA
GTFSGSINFQAPLSSRIGRIVAYTTSPKDGSVVGRDEATLTLPAWNGTGAYLAQPAPETSAFLPLHVEAVGLSSDTYTVR
LRYADGTLLENTTQAYNGYLALSLMWDNAAPILPNQSAILELVKADGTVELTQNLYMQDLTSQPTTSVEVSWLAGEGSIN
GIRILPKTSSVASAALRELVWGPVGKDSAYSTAIPSPKIIADYTGDKTGWTGRVHLRSVRIEGDIAYVDWSREMRAWGGG
SMQLESLQAQVDLTLKQFSQVKQVVMTVEGSEEVLQP

Sequences:

>Translated_517_residues
MRSLKYISLALLLVACGGQSPATTTPAATTNLPAQATATIQTGSAATTIPTTVPQATGMPQATVATANQINLSAPPVDAV
LTDSVRVAGTIVLTPFEKTLRLVIQTNDGNILYEGPINTTGEYGSSATFDVTVPIVAAASGPGVIKVIEDDMSGELPYRT
IAEQPVQFTSTSAEPTPAEPGILIELTEPAMHAVVGNPLNFKGTLSAMPFEKNVVIEVYDSELHLLGQTSVIADGEYGSA
GTFSGSINFQAPLSSRIGRIVAYTTSPKDGSVVGRDEATLTLPAWNGTGAYLAQPAPETSAFLPLHVEAVGLSSDTYTVR
LRYADGTLLENTTQAYNGYLALSLMWDNAAPILPNQSAILELVKADGTVELTQNLYMQDLTSQPTTSVEVSWLAGEGSIN
GIRILPKTSSVASAALRELVWGPVGKDSAYSTAIPSPKIIADYTGDKTGWTGRVHLRSVRIEGDIAYVDWSREMRAWGGG
SMQLESLQAQVDLTLKQFSQVKQVVMTVEGSEEVLQP
>Mature_517_residues
MRSLKYISLALLLVACGGQSPATTTPAATTNLPAQATATIQTGSAATTIPTTVPQATGMPQATVATANQINLSAPPVDAV
LTDSVRVAGTIVLTPFEKTLRLVIQTNDGNILYEGPINTTGEYGSSATFDVTVPIVAAASGPGVIKVIEDDMSGELPYRT
IAEQPVQFTSTSAEPTPAEPGILIELTEPAMHAVVGNPLNFKGTLSAMPFEKNVVIEVYDSELHLLGQTSVIADGEYGSA
GTFSGSINFQAPLSSRIGRIVAYTTSPKDGSVVGRDEATLTLPAWNGTGAYLAQPAPETSAFLPLHVEAVGLSSDTYTVR
LRYADGTLLENTTQAYNGYLALSLMWDNAAPILPNQSAILELVKADGTVELTQNLYMQDLTSQPTTSVEVSWLAGEGSIN
GIRILPKTSSVASAALRELVWGPVGKDSAYSTAIPSPKIIADYTGDKTGWTGRVHLRSVRIEGDIAYVDWSREMRAWGGG
SMQLESLQAQVDLTLKQFSQVKQVVMTVEGSEEVLQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54564; Mature: 54564

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLKYISLALLLVACGGQSPATTTPAATTNLPAQATATIQTGSAATTIPTTVPQATGMP
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCC
QATVATANQINLSAPPVDAVLTDSVRVAGTIVLTPFEKTLRLVIQTNDGNILYEGPINTT
CEEEEECCEEECCCCCCCEEECCCEEEEEEEEECCCCCEEEEEEEECCCCEEEECCCCCC
GEYGSSATFDVTVPIVAAASGPGVIKVIEDDMSGELPYRTIAEQPVQFTSTSAEPTPAEP
CCCCCCEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHCCCCEEECCCCCCCCCCC
GILIELTEPAMHAVVGNPLNFKGTLSAMPFEKNVVIEVYDSELHLLGQTSVIADGEYGSA
CEEEEECCCHHHHHHCCCCCCCEEEECCCCCCCEEEEEECCCEEEEECEEEEECCCCCCC
GTFSGSINFQAPLSSRIGRIVAYTTSPKDGSVVGRDEATLTLPAWNGTGAYLAQPAPETS
CEECCEEEEECCHHHCCCEEEEEEECCCCCCEEECCCCEEEEECCCCCCCEEECCCCCCC
AFLPLHVEAVGLSSDTYTVRLRYADGTLLENTTQAYNGYLALSLMWDNAAPILPNQSAIL
CEEEEEEEEEECCCCEEEEEEEECCCCEECCCHHHCCCEEEEEEEECCCCCCCCCHHHHH
ELVKADGTVELTQNLYMQDLTSQPTTSVEVSWLAGEGSINGIRILPKTSSVASAALRELV
HHHHCCCEEEEHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHH
WGPVGKDSAYSTAIPSPKIIADYTGDKTGWTGRVHLRSVRIEGDIAYVDWSREMRAWGGG
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEEEECEEEEEECCCHHHHCCCC
SMQLESLQAQVDLTLKQFSQVKQVVMTVEGSEEVLQP
CEEEEEEHHEEEHHHHHHHHHHHEEEEECCCHHHHCC
>Mature Secondary Structure
MRSLKYISLALLLVACGGQSPATTTPAATTNLPAQATATIQTGSAATTIPTTVPQATGMP
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCC
QATVATANQINLSAPPVDAVLTDSVRVAGTIVLTPFEKTLRLVIQTNDGNILYEGPINTT
CEEEEECCEEECCCCCCCEEECCCEEEEEEEEECCCCCEEEEEEEECCCCEEEECCCCCC
GEYGSSATFDVTVPIVAAASGPGVIKVIEDDMSGELPYRTIAEQPVQFTSTSAEPTPAEP
CCCCCCEEEEEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHCCCCEEECCCCCCCCCCC
GILIELTEPAMHAVVGNPLNFKGTLSAMPFEKNVVIEVYDSELHLLGQTSVIADGEYGSA
CEEEEECCCHHHHHHCCCCCCCEEEECCCCCCCEEEEEECCCEEEEECEEEEECCCCCCC
GTFSGSINFQAPLSSRIGRIVAYTTSPKDGSVVGRDEATLTLPAWNGTGAYLAQPAPETS
CEECCEEEEECCHHHCCCEEEEEEECCCCCCEEECCCCEEEEECCCCCCCEEECCCCCCC
AFLPLHVEAVGLSSDTYTVRLRYADGTLLENTTQAYNGYLALSLMWDNAAPILPNQSAIL
CEEEEEEEEEECCCCEEEEEEEECCCCEECCCHHHCCCEEEEEEEECCCCCCCCCHHHHH
ELVKADGTVELTQNLYMQDLTSQPTTSVEVSWLAGEGSINGIRILPKTSSVASAALRELV
HHHHCCCEEEEHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHH
WGPVGKDSAYSTAIPSPKIIADYTGDKTGWTGRVHLRSVRIEGDIAYVDWSREMRAWGGG
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEEEECEEEEEECCCHHHHCCCC
SMQLESLQAQVDLTLKQFSQVKQVVMTVEGSEEVLQP
CEEEEEEHHEEEHHHHHHHHHHHEEEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA