| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900205
Identifier: 159900205
GI number: 159900205
Start: 4640000
End: 4641052
Strand: Direct
Name: 159900205
Synonym: Haur_3688
Alternate gene names: NA
Gene position: 4640000-4641052 (Clockwise)
Preceding gene: 159900204
Following gene: 159900209
Centisome position: 73.11
GC content: 47.39
Gene sequence:
>1053_bases ATGGCTCTAGCAACGCCCACGCCCCAACAATCGCTGGTTGAGCGAATTCGGCTTTTGGTGATTGCCCAAACCGTCATGGT TGGCTTAATTGGTATCGCCACTTGGTTTTTGGTCGAAATTCCAAAGGAGCGGGCGGGAGTTGCGCTAGGTCTAGCACTCG TCACGACTATCAATGTTTTTCTCTATCTATTGCGCAAATCGCGTCATGCTCCACGGATCGTCGTGGTCAATTTCTTGTTG ATCGTCGGGGTGATTGTGCTGACAGATGCGACAGGTGCCCAATTATCGGGCATGAATTGGACGCTGTATCTGATTTGGCC AGCCTTGACCATGTTGGTGCTGCGCGAATTACGCTATGTGCTGGTGGTCAGTGTCGTTACCTTGGCAGCATTAATTACCT TCCCTTTGCTCGAAATTTATGGGGTGATTTCGCTGGAGTTGATGATTCCTGCGCCGATGTTACTGTTAAAATTGATTATT TTTGTGGTCGTTTTTTTGATTTTGACTTCCATGATGATCGTGATTGGCTTGGCTGATCAGCGCAGTCAAAAAGTGCTAGC TGAACATACGGCATTAATCACCAATCAACAAGCTGAATTAGCCCAAGCCAATCAATCGCTGCAAGCAGGCAACCACCAAT TACAAGCCTTGGCCCAACGTCAAGAAAGCTTGCTTAATCAAATTCAACTGCTCGAAGCACCCATTATTCGCTTGGGCAAT AATGCGATTTTGCTGCCAATCACGGGTATGCTCGATCAACAACGGATTAGCCATATTCGCAGCGCCGTGCTCCAACAAAT TTACCAACTACGAGCGCAACATTTAATTCTCGATATGACTGGAGCATTATTGCCCGATGCCAGCGTGCTGCCCGATTTTG CCGATATGCTAGCAGCGATTAAACTCTTGGGTTGCGAAGTGCGGGTTACGGGCATGACCAGCGAGATTGTGCAGCAATTG GTCTTTACCGATGTCGATTTGCGCATTTTTGGCAAAACTGGCCAGTTGGAGCAATTGATTCAAGAGGTTTTACAGCCTTC AAAAGGGAAATAG
Upstream 100 bases:
>100_bases TTTCGCGCTAAAATAGACTATTCTAAAAGCATGAATCGTTTGCGCTGATTCATGCTTTTCTTTTGCTCAGTTTCCTCATT GATCGAACATACGAGGCACT
Downstream 100 bases:
>100_bases CTCTTCGATTGAGATTAATTGCAACGAGCCAGTTGGGCATTGGCTCAAACAAGCCCGATCATCATAGCCTGCGCATAAAT CGCATTTACTAGCCACGGTT
Product: anti-sigma-factor antagonist
Products: NA
Alternate protein names: Sulfate Transporter/Antisigma-Factor Antagonist STAS
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MALATPTPQQSLVERIRLLVIAQTVMVGLIGIATWFLVEIPKERAGVALGLALVTTINVFLYLLRKSRHAPRIVVVNFLL IVGVIVLTDATGAQLSGMNWTLYLIWPALTMLVLRELRYVLVVSVVTLAALITFPLLEIYGVISLELMIPAPMLLLKLII FVVVFLILTSMMIVIGLADQRSQKVLAEHTALITNQQAELAQANQSLQAGNHQLQALAQRQESLLNQIQLLEAPIIRLGN NAILLPITGMLDQQRISHIRSAVLQQIYQLRAQHLILDMTGALLPDASVLPDFADMLAAIKLLGCEVRVTGMTSEIVQQL VFTDVDLRIFGKTGQLEQLIQEVLQPSKGK
Sequences:
>Translated_350_residues MALATPTPQQSLVERIRLLVIAQTVMVGLIGIATWFLVEIPKERAGVALGLALVTTINVFLYLLRKSRHAPRIVVVNFLL IVGVIVLTDATGAQLSGMNWTLYLIWPALTMLVLRELRYVLVVSVVTLAALITFPLLEIYGVISLELMIPAPMLLLKLII FVVVFLILTSMMIVIGLADQRSQKVLAEHTALITNQQAELAQANQSLQAGNHQLQALAQRQESLLNQIQLLEAPIIRLGN NAILLPITGMLDQQRISHIRSAVLQQIYQLRAQHLILDMTGALLPDASVLPDFADMLAAIKLLGCEVRVTGMTSEIVQQL VFTDVDLRIFGKTGQLEQLIQEVLQPSKGK >Mature_349_residues ALATPTPQQSLVERIRLLVIAQTVMVGLIGIATWFLVEIPKERAGVALGLALVTTINVFLYLLRKSRHAPRIVVVNFLLI VGVIVLTDATGAQLSGMNWTLYLIWPALTMLVLRELRYVLVVSVVTLAALITFPLLEIYGVISLELMIPAPMLLLKLIIF VVVFLILTSMMIVIGLADQRSQKVLAEHTALITNQQAELAQANQSLQAGNHQLQALAQRQESLLNQIQLLEAPIIRLGNN AILLPITGMLDQQRISHIRSAVLQQIYQLRAQHLILDMTGALLPDASVLPDFADMLAAIKLLGCEVRVTGMTSEIVQQLV FTDVDLRIFGKTGQLEQLIQEVLQPSKGK
Specific function: Unknown
COG id: COG1366
COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38558; Mature: 38427
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALATPTPQQSLVERIRLLVIAQTVMVGLIGIATWFLVEIPKERAGVALGLALVTTINVF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHH LYLLRKSRHAPRIVVVNFLLIVGVIVLTDATGAQLSGMNWTLYLIWPALTMLVLRELRYV HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEHHHHHHHHHHHHHHHHHH LVVSVVTLAALITFPLLEIYGVISLELMIPAPMLLLKLIIFVVVFLILTSMMIVIGLADQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RSQKVLAEHTALITNQQAELAQANQSLQAGNHQLQALAQRQESLLNQIQLLEAPIIRLGN HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NAILLPITGMLDQQRISHIRSAVLQQIYQLRAQHLILDMTGALLPDASVLPDFADMLAAI CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH KLLGCEVRVTGMTSEIVQQLVFTDVDLRIFGKTGQLEQLIQEVLQPSKGK HHHCCCEEEECCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure ALATPTPQQSLVERIRLLVIAQTVMVGLIGIATWFLVEIPKERAGVALGLALVTTINVF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHH LYLLRKSRHAPRIVVVNFLLIVGVIVLTDATGAQLSGMNWTLYLIWPALTMLVLRELRYV HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEHHHHHHHHHHHHHHHHHH LVVSVVTLAALITFPLLEIYGVISLELMIPAPMLLLKLIIFVVVFLILTSMMIVIGLADQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RSQKVLAEHTALITNQQAELAQANQSLQAGNHQLQALAQRQESLLNQIQLLEAPIIRLGN HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NAILLPITGMLDQQRISHIRSAVLQQIYQLRAQHLILDMTGALLPDASVLPDFADMLAAI CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH KLLGCEVRVTGMTSEIVQQLVFTDVDLRIFGKTGQLEQLIQEVLQPSKGK HHHCCCEEEECCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA