| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900192
Identifier: 159900192
GI number: 159900192
Start: 4618829
End: 4619362
Strand: Direct
Name: 159900192
Synonym: Haur_3675
Alternate gene names: NA
Gene position: 4618829-4619362 (Clockwise)
Preceding gene: 159900191
Following gene: 159900195
Centisome position: 72.78
GC content: 55.62
Gene sequence:
>534_bases TTGACGCTTGATCAATGGTTTTATCTGGCGGCGTTGGGTTTCGGTGGGGCAATTATTGCGATCACCAAAATTCGCCGTCA GCCGCTCTGGCCTTCGCTCGAACGGATGCAACGCTCATCGCGCTGGTTGATTTTTCAGCCCTTGGTGCTGGCAAGTTGGC TCATTATGGCGGCTGGCGTGGGCTTTTTGGCCCGTGGCGCTGGAGTCAATTGGTGGTTAAGTGGCATGATTGCCTTGGCA GGAGGCTTGGCAGTTGGTTTGCTGCTCTATCGAATGATTATTGAACGTAGCATTGTGCAACAGGCTGGCACGGCGCAAAG CAAAGTTGGGCCAATCGGCCAATTGGGCGTGGTGGTCGAAGCCTTGCCCGTCGATGGCTTTGGGGTGGTCGCCTACGAAC ATCAAAAAGGCGCAGCCCGTATCAATGCCCGAGCAATTGGTGGCCGAGCAATTGAGGCAGGCTGCGCCGTGATGATCGTC GAGGTTAATGAGCAAGGAGCAACTGTGCTGCGCCTAGAGTCGCTGGAAAGCTAG
Upstream 100 bases:
>100_bases CTCAGCACAATGGCCGCGACAATTTGGCCCGTTGGCTGCAAACAGGCCGCGCCAAGCTCGATGATTAACATCCCCTTGCA ACTTGAAAGGATCAGCCATT
Downstream 100 bases:
>100_bases CCGTAAATACAATATGGCGTAGTTTGCTCGATGATTGGGCTGCCAGCGGGGGCGGTGTAGGTTTGCCATTCAGCAGGCAG TGCCTCCAATTCAACCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTLDQWFYLAALGFGGAIIAITKIRRQPLWPSLERMQRSSRWLIFQPLVLASWLIMAAGVGFLARGAGVNWWLSGMIALA GGLAVGLLLYRMIIERSIVQQAGTAQSKVGPIGQLGVVVEALPVDGFGVVAYEHQKGAARINARAIGGRAIEAGCAVMIV EVNEQGATVLRLESLES
Sequences:
>Translated_177_residues MTLDQWFYLAALGFGGAIIAITKIRRQPLWPSLERMQRSSRWLIFQPLVLASWLIMAAGVGFLARGAGVNWWLSGMIALA GGLAVGLLLYRMIIERSIVQQAGTAQSKVGPIGQLGVVVEALPVDGFGVVAYEHQKGAARINARAIGGRAIEAGCAVMIV EVNEQGATVLRLESLES >Mature_176_residues TLDQWFYLAALGFGGAIIAITKIRRQPLWPSLERMQRSSRWLIFQPLVLASWLIMAAGVGFLARGAGVNWWLSGMIALAG GLAVGLLLYRMIIERSIVQQAGTAQSKVGPIGQLGVVVEALPVDGFGVVAYEHQKGAARINARAIGGRAIEAGCAVMIVE VNEQGATVLRLESLES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18958; Mature: 18826
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDQWFYLAALGFGGAIIAITKIRRQPLWPSLERMQRSSRWLIFQPLVLASWLIMAAGV CCCHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHCH GFLARGAGVNWWLSGMIALAGGLAVGLLLYRMIIERSIVQQAGTAQSKVGPIGQLGVVVE HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEE ALPVDGFGVVAYEHQKGAARINARAIGGRAIEAGCAVMIVEVNEQGATVLRLESLES EECCCCEEEEEEECCCCCEEEEEEECCCEEEECCEEEEEEEECCCCCEEEEEECCCC >Mature Secondary Structure TLDQWFYLAALGFGGAIIAITKIRRQPLWPSLERMQRSSRWLIFQPLVLASWLIMAAGV CCHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHCH GFLARGAGVNWWLSGMIALAGGLAVGLLLYRMIIERSIVQQAGTAQSKVGPIGQLGVVVE HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEE ALPVDGFGVVAYEHQKGAARINARAIGGRAIEAGCAVMIVEVNEQGATVLRLESLES EECCCCEEEEEEECCCCCEEEEEEECCCEEEECCEEEEEEEECCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA