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The map label for this gene is groS [H]

Identifier: 159900195

GI number: 159900195

Start: 4621178

End: 4621480

Strand: Direct

Name: groS [H]

Synonym: Haur_3678

Alternate gene names: 159900195

Gene position: 4621178-4621480 (Clockwise)

Preceding gene: 159900192

Following gene: 159900196

Centisome position: 72.81

GC content: 49.5

Gene sequence:

>303_bases
ATGTCTGATTTCCGGATTCGCCCCTTGGCCGATCGTGTGGTGATCAAGCCTCAAGCCAAAGAAGAAAAAACCAAGAGTGG
CTTGTTCCTGCCCGACACAGCGAATAAAGAAAAGCCTCAAGAAGGCCTCGTTGTGGCCGTTGGTGAAGGCAAGTTGGATG
ATAACGGCAAGCGCGTGCCAGTTGCAGTGCAAGTTGGTGATCGGGTGCTGTTTGCCAAATATGCTGGCACCGAGATCAAG
CTGGACGACGAAGATTATTTGATTTTGGCTGAAAAAGATATTTTGGCCGTCGTTCAAGGCTAA

Upstream 100 bases:

>100_bases
CAAGCCTTGACAAGCTTAACAGAACCACATACACTAGCACTTGGATTTAGCACTCATCACAGTAGATTGCTAAATGGTCA
ACTAAGGAGGACACATAACC

Downstream 100 bases:

>100_bases
GGCTAATTCGCGACGCTTCTTAGGAGGATTATTTACCAATGGCAAAGCAAGTTGCTTTTAATGAAGAAGCCCGCCGCGCA
CTCAAACGTGGCGTGGACGT

Product: chaperonin Cpn10

Products: NA

Alternate protein names: GroES protein; Protein Cpn10 [H]

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MSDFRIRPLADRVVIKPQAKEEKTKSGLFLPDTANKEKPQEGLVVAVGEGKLDDNGKRVPVAVQVGDRVLFAKYAGTEIK
LDDEDYLILAEKDILAVVQG

Sequences:

>Translated_100_residues
MSDFRIRPLADRVVIKPQAKEEKTKSGLFLPDTANKEKPQEGLVVAVGEGKLDDNGKRVPVAVQVGDRVLFAKYAGTEIK
LDDEDYLILAEKDILAVVQG
>Mature_99_residues
SDFRIRPLADRVVIKPQAKEEKTKSGLFLPDTANKEKPQEGLVVAVGEGKLDDNGKRVPVAVQVGDRVLFAKYAGTEIKL
DDEDYLILAEKDILAVVQG

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family [H]

Homologues:

Organism=Homo sapiens, GI4504523, Length=92, Percent_Identity=42.3913043478261, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1790585, Length=97, Percent_Identity=42.2680412371134, Blast_Score=72, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17555568, Length=94, Percent_Identity=39.3617021276596, Blast_Score=70, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324594, Length=84, Percent_Identity=46.4285714285714, Blast_Score=68, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21356029, Length=95, Percent_Identity=38.9473684210526, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032 [H]

Pfam domain/function: PF00166 Cpn10 [H]

EC number: NA

Molecular weight: Translated: 10979; Mature: 10848

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFRIRPLADRVVIKPQAKEEKTKSGLFLPDTANKEKPQEGLVVAVGEGKLDDNGKRVP
CCCCCCCCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCEECCCCCEEE
VAVQVGDRVLFAKYAGTEIKLDDEDYLILAEKDILAVVQG
EEEEECCEEEEEEECCCEEEECCCCEEEEECCCEEEEECC
>Mature Secondary Structure 
SDFRIRPLADRVVIKPQAKEEKTKSGLFLPDTANKEKPQEGLVVAVGEGKLDDNGKRVP
CCCCCCCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCEECCCCCEEE
VAVQVGDRVLFAKYAGTEIKLDDEDYLILAEKDILAVVQG
EEEEECCEEEEEEECCCEEEECCCCEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA