Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900173

Identifier: 159900173

GI number: 159900173

Start: 4597467

End: 4598468

Strand: Reverse

Name: 159900173

Synonym: Haur_3656

Alternate gene names: NA

Gene position: 4598468-4597467 (Counterclockwise)

Preceding gene: 159900174

Following gene: 159900172

Centisome position: 72.46

GC content: 32.34

Gene sequence:

>1002_bases
ATGTATTGTCCAAATTGTTATATCAAATTCCCATCAGGTGAAACCCGCTGCCCTAAATGTGGTGGGCCTGGTGTACCAAG
AAACACTCAATCACCAAAATCCCAGGTGAACTCAGTTCGTCGTACAACTGTGCCCCTAAACGGCAAACAACGTTGGAGTC
TTTTTCTGAGTAGCCTTTTTGGGTTATTACTGCTTGCAATACCAAATATTATTATTTTTGGTATTCTTTTACCAATGCAA
TTTAATTGGTTAGTATTTACGCTAGGTATTGGTGTTATAATTATTGGTATTTATAAAATCTCTAGTTTGCATGAATTAAT
TGACGGAAATTCCTATATTAAGTCATTCCAACTCATTAGGGTTGATCGTGTTCAAAATAGCAGAACTTACTACTTTGGTT
TCTTTAAAGATCTTGGCTGTGTGACAATTGATGCTGAGATGTTTGATAACGCTAAGTTAGGAGCAATATATCAGATACAG
TATAGTCCAAGAAGTAAAATCGTTTGGAGCATGAAAATTGAAGATGAAAAACCAGCTAACATAATTTCTGATATAAAACC
AAATCATCAGGAAAATATAAGTGATAAACAAAGAAAAATAACATTTATTCAGCGAAAAGAATTATTATTTATGCTGATGA
GACATAGTATTCTTGTTTCTTTGTATCCAATATATGTTATTTTTAATCCAGCTTTAGCGTTATCTGATTTAAATGTATTT
ATAATTATTATATATATCTTTATTTTTTATAACCTAGGAATGATTGTTCTTGCTCTATTAGATTTGATTTCGAATACGAA
TGAGCTTGACAATGATCGATTGATTCGGGTGGAATTTACCTATGGCCGAAGAGGGAAACGTTTTTATGCAATATTTGAAG
GCAATAATCGCCTGAATATTAATGAGCAACAGTATATAGATCTGGTTGAAAATCAAATATATCAAATTACGTATAGTCGA
TGGACTAGAAAGTTATGGGAGGCACAATTACTCGATTCTTAA

Upstream 100 bases:

>100_bases
GCGTGTATCTAGTAGCTAAAATAGGCCGATTAATCTTTGATCTTTGGCGGAGTAAACGCGAAAAGTAAGTTCTAGCATGT
GAGAACGATGGAACAGAGTT

Downstream 100 bases:

>100_bases
ACCTAAATTATTGGTTAAGCTAATTATTGATGCGATGAGCGAAGGAGTAAAATGATGAATTGCCCAAATTGTTATACCAA
AATTCCTGATAATCAAGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MYCPNCYIKFPSGETRCPKCGGPGVPRNTQSPKSQVNSVRRTTVPLNGKQRWSLFLSSLFGLLLLAIPNIIIFGILLPMQ
FNWLVFTLGIGVIIIGIYKISSLHELIDGNSYIKSFQLIRVDRVQNSRTYYFGFFKDLGCVTIDAEMFDNAKLGAIYQIQ
YSPRSKIVWSMKIEDEKPANIISDIKPNHQENISDKQRKITFIQRKELLFMLMRHSILVSLYPIYVIFNPALALSDLNVF
IIIIYIFIFYNLGMIVLALLDLISNTNELDNDRLIRVEFTYGRRGKRFYAIFEGNNRLNINEQQYIDLVENQIYQITYSR
WTRKLWEAQLLDS

Sequences:

>Translated_333_residues
MYCPNCYIKFPSGETRCPKCGGPGVPRNTQSPKSQVNSVRRTTVPLNGKQRWSLFLSSLFGLLLLAIPNIIIFGILLPMQ
FNWLVFTLGIGVIIIGIYKISSLHELIDGNSYIKSFQLIRVDRVQNSRTYYFGFFKDLGCVTIDAEMFDNAKLGAIYQIQ
YSPRSKIVWSMKIEDEKPANIISDIKPNHQENISDKQRKITFIQRKELLFMLMRHSILVSLYPIYVIFNPALALSDLNVF
IIIIYIFIFYNLGMIVLALLDLISNTNELDNDRLIRVEFTYGRRGKRFYAIFEGNNRLNINEQQYIDLVENQIYQITYSR
WTRKLWEAQLLDS
>Mature_333_residues
MYCPNCYIKFPSGETRCPKCGGPGVPRNTQSPKSQVNSVRRTTVPLNGKQRWSLFLSSLFGLLLLAIPNIIIFGILLPMQ
FNWLVFTLGIGVIIIGIYKISSLHELIDGNSYIKSFQLIRVDRVQNSRTYYFGFFKDLGCVTIDAEMFDNAKLGAIYQIQ
YSPRSKIVWSMKIEDEKPANIISDIKPNHQENISDKQRKITFIQRKELLFMLMRHSILVSLYPIYVIFNPALALSDLNVF
IIIIYIFIFYNLGMIVLALLDLISNTNELDNDRLIRVEFTYGRRGKRFYAIFEGNNRLNINEQQYIDLVENQIYQITYSR
WTRKLWEAQLLDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38732; Mature: 38732

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCPNCYIKFPSGETRCPKCGGPGVPRNTQSPKSQVNSVRRTTVPLNGKQRWSLFLSSLF
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHH
GLLLLAIPNIIIFGILLPMQFNWLVFTLGIGVIIIGIYKISSLHELIDGNSYIKSFQLIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEE
VDRVQNSRTYYFGFFKDLGCVTIDAEMFDNAKLGAIYQIQYSPRSKIVWSMKIEDEKPAN
EEECCCCCEEEEEEECCCCEEEEEHHHCCCCCCCEEEEEEECCCCCEEEEEEECCCCCHH
IISDIKPNHQENISDKQRKITFIQRKELLFMLMRHSILVSLYPIYVIFNPALALSDLNVF
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHCCHHH
IIIIYIFIFYNLGMIVLALLDLISNTNELDNDRLIRVEFTYGRRGKRFYAIFEGNNRLNI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCEECC
NEQQYIDLVENQIYQITYSRWTRKLWEAQLLDS
CHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYCPNCYIKFPSGETRCPKCGGPGVPRNTQSPKSQVNSVRRTTVPLNGKQRWSLFLSSLF
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHH
GLLLLAIPNIIIFGILLPMQFNWLVFTLGIGVIIIGIYKISSLHELIDGNSYIKSFQLIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEE
VDRVQNSRTYYFGFFKDLGCVTIDAEMFDNAKLGAIYQIQYSPRSKIVWSMKIEDEKPAN
EEECCCCCEEEEEEECCCCEEEEEHHHCCCCCCCEEEEEEECCCCCEEEEEEECCCCCHH
IISDIKPNHQENISDKQRKITFIQRKELLFMLMRHSILVSLYPIYVIFNPALALSDLNVF
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHCCHHH
IIIIYIFIFYNLGMIVLALLDLISNTNELDNDRLIRVEFTYGRRGKRFYAIFEGNNRLNI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCEECC
NEQQYIDLVENQIYQITYSRWTRKLWEAQLLDS
CHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA