| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900172
Identifier: 159900172
GI number: 159900172
Start: 4596369
End: 4597415
Strand: Reverse
Name: 159900172
Synonym: Haur_3655
Alternate gene names: NA
Gene position: 4597415-4596369 (Counterclockwise)
Preceding gene: 159900173
Following gene: 159900170
Centisome position: 72.44
GC content: 33.62
Gene sequence:
>1047_bases ATGATGAATTGCCCAAATTGTTATACCAAAATTCCTGATAATCAAGCTACGTGTGAACGCTGTGGCTGGCCGGATTTAGC CGAAAAAACTGAATTAAAGCCTGCAACGCCTCGTTCAAAGCAGGCTCCAAGCATGCCAATGACCGGCAAACAACGCTGGT ATCATTTCATCAAAGCCTTGTTTCCATTATTATTTGCCTTAGTGCCAATTATTGGAATCTTTACGCTTGTTTCACCCAAA AATTTTACGTTGATTCCATTGTTGATCGTGATTGGCTTGATTGTTGCTGCTACATATTTTAATAAAGATTTACATGATCT TGTCAATAGTGTTGTGTACGTTGAATCGGACCAATTACTCAAAGTAGATCGGTTTTATGGTCATAAAGGAAGCATCATCT ATATGGCTTTTTTTAAGCGTCTTGGTGATTTTCAAGTTGATCAAGAAATATATAATACTGTTGAATTGCAATCATTCTAT CGAGTAATGTATAGCCAAAAAAGTAAAAAGCTTTGGAAGGTGAAACTTGAATCGAATCAAGCAGTTCTTGATAATGTATT AAGCGAAAAACAAATATCCTACTCACCAAATGAGGGTGTTCAAGGAGTAGGTCAATTATCACTTAATCAACGTAAAGAAA TTATAGTATCGATTGTGAATTTTGTGATTTTTATGATATTAATTTATCTATTTTTAGGTAGTTATATAAAAAGATTATTA TGGAATTCTGATAATGCATCTATAGGTATTATAGTATCTTCTGTAATTCTGTTTATATTTCTGAATTTATTTAAAGGAAT AGTATTTCAAGTTATCGATTTTATTACAGGAAAGGTTGAATCTACGATCGATACATTTATCGATTTTGATAAGAGACATA GCAATCCTGGAGTTGAATATACGGCGAAATTTCAAAAACTTGGCAAGGTATCAGTTAAGCAACAGCACTATCTTGAGCTG GTCAAAGGCGAGAAGTATCAATTATTCTATAGCCGATGGAGTAAGATAGTGTGGGATGTGCAAAAAATTAACGAAAAATC GGCCTAA
Upstream 100 bases:
>100_bases TAGTCGATGGACTAGAAAGTTATGGGAGGCACAATTACTCGATTCTTAAACCTAAATTATTGGTTAAGCTAATTATTGAT GCGATGAGCGAAGGAGTAAA
Downstream 100 bases:
>100_bases AAAACTAAAACCGCCACTCAACTGAGCGGCGGCTTGCGCCAAACTAGCGTCCAGGTAAAGGATCATCCATGGGGACGAGG CGTTGGCGTAGGGCATAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MMNCPNCYTKIPDNQATCERCGWPDLAEKTELKPATPRSKQAPSMPMTGKQRWYHFIKALFPLLFALVPIIGIFTLVSPK NFTLIPLLIVIGLIVAATYFNKDLHDLVNSVVYVESDQLLKVDRFYGHKGSIIYMAFFKRLGDFQVDQEIYNTVELQSFY RVMYSQKSKKLWKVKLESNQAVLDNVLSEKQISYSPNEGVQGVGQLSLNQRKEIIVSIVNFVIFMILIYLFLGSYIKRLL WNSDNASIGIIVSSVILFIFLNLFKGIVFQVIDFITGKVESTIDTFIDFDKRHSNPGVEYTAKFQKLGKVSVKQQHYLEL VKGEKYQLFYSRWSKIVWDVQKINEKSA
Sequences:
>Translated_348_residues MMNCPNCYTKIPDNQATCERCGWPDLAEKTELKPATPRSKQAPSMPMTGKQRWYHFIKALFPLLFALVPIIGIFTLVSPK NFTLIPLLIVIGLIVAATYFNKDLHDLVNSVVYVESDQLLKVDRFYGHKGSIIYMAFFKRLGDFQVDQEIYNTVELQSFY RVMYSQKSKKLWKVKLESNQAVLDNVLSEKQISYSPNEGVQGVGQLSLNQRKEIIVSIVNFVIFMILIYLFLGSYIKRLL WNSDNASIGIIVSSVILFIFLNLFKGIVFQVIDFITGKVESTIDTFIDFDKRHSNPGVEYTAKFQKLGKVSVKQQHYLEL VKGEKYQLFYSRWSKIVWDVQKINEKSA >Mature_348_residues MMNCPNCYTKIPDNQATCERCGWPDLAEKTELKPATPRSKQAPSMPMTGKQRWYHFIKALFPLLFALVPIIGIFTLVSPK NFTLIPLLIVIGLIVAATYFNKDLHDLVNSVVYVESDQLLKVDRFYGHKGSIIYMAFFKRLGDFQVDQEIYNTVELQSFY RVMYSQKSKKLWKVKLESNQAVLDNVLSEKQISYSPNEGVQGVGQLSLNQRKEIIVSIVNFVIFMILIYLFLGSYIKRLL WNSDNASIGIIVSSVILFIFLNLFKGIVFQVIDFITGKVESTIDTFIDFDKRHSNPGVEYTAKFQKLGKVSVKQQHYLEL VKGEKYQLFYSRWSKIVWDVQKINEKSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40110; Mature: 40110
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNCPNCYTKIPDNQATCERCGWPDLAEKTELKPATPRSKQAPSMPMTGKQRWYHFIKAL CCCCCCCCCCCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH FPLLFALVPIIGIFTLVSPKNFTLIPLLIVIGLIVAATYFNKDLHDLVNSVVYVESDQLL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEEECCCCCE KVDRFYGHKGSIIYMAFFKRLGDFQVDQEIYNTVELQSFYRVMYSQKSKKLWKVKLESNQ EHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCH AVLDNVLSEKQISYSPNEGVQGVGQLSLNQRKEIIVSIVNFVIFMILIYLFLGSYIKRLL HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WNSDNASIGIIVSSVILFIFLNLFKGIVFQVIDFITGKVESTIDTFIDFDKRHSNPGVEY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TAKFQKLGKVSVKQQHYLELVKGEKYQLFYSRWSKIVWDVQKINEKSA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMNCPNCYTKIPDNQATCERCGWPDLAEKTELKPATPRSKQAPSMPMTGKQRWYHFIKAL CCCCCCCCCCCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH FPLLFALVPIIGIFTLVSPKNFTLIPLLIVIGLIVAATYFNKDLHDLVNSVVYVESDQLL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEEECCCCCE KVDRFYGHKGSIIYMAFFKRLGDFQVDQEIYNTVELQSFYRVMYSQKSKKLWKVKLESNQ EHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCH AVLDNVLSEKQISYSPNEGVQGVGQLSLNQRKEIIVSIVNFVIFMILIYLFLGSYIKRLL HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WNSDNASIGIIVSSVILFIFLNLFKGIVFQVIDFITGKVESTIDTFIDFDKRHSNPGVEY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TAKFQKLGKVSVKQQHYLELVKGEKYQLFYSRWSKIVWDVQKINEKSA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA