| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900136
Identifier: 159900136
GI number: 159900136
Start: 4549490
End: 4550638
Strand: Reverse
Name: 159900136
Synonym: Haur_3619
Alternate gene names: NA
Gene position: 4550638-4549490 (Counterclockwise)
Preceding gene: 159900138
Following gene: 159900135
Centisome position: 71.7
GC content: 49.17
Gene sequence:
>1149_bases ATGGCATTTTTTCGGCAGCGCTTTGAGCTAGCCCGTGGTTTAGCAGGAACCAACCTGCGCTCGATGGAAGGCTTGCGCGG AATCGCAGTTTTTCTGGTGTTTTTGGTGCACTTTCGTAGTTCAATTCAGCCGTGGTTATTCAGCGATAGCCCAACCGCAA CGATTAATAATGCATTGGCAATGGTTGGCAACACTGGGGTTGATTTATTTTTCGTGCTCAGTGGCTACTTAATTTATGCC TCATTGATTAAACGTCAGCAAGCCTATATGGGCTTTATTGGGCGACGAATTCGGCGGATCTACCCGACATTCTTTGTGAT TTTCATGGTCTATCTGGGGTTATCAATTCTTTTTCCGGCTGAAAGCAAAATCCCCAGCGGCGTAACTGCTGCAACGCTCT ATTTCATTCAAAACTTAATCTTTTTGCCTGGGTTGCTGCCGATTGAGCCAATGATTACGGTGGCTTGGTCGCTGAGTTAT GAAGTATTTTATTATCTGATTATGCCAGTCATCGTCGTGGCGATTGGCTTGCGTGGCAAAACCCCCCAATGGCGGATCGG CTTTTTCAGCGTGGTTGGCGTGGTGCTCACCGCCGTTTGTATCATCTGGCAAGGCCCGCTGAAATTGGCGATGTTTATTG CTGGCATTTTGCTGCACGAATTGTTGGAATCGTATCGCGAGCGCACGCCAGCGGCTTGGCTCGGCTTGCTTGGTTTGGTT ATGGGAACCTGTGCACCGTTGTTGCCGCTGACTGGCACGCTGGGTAATGCGATTCGGTTTACATTAATTTTCAGTGGCTT TTTGCTGGTATGCTGGCACTGTTTTAGCCAAACTGAATCGTGGCTCAAACAAGCGCTTTCGTGGACACCACTGCGTTGGT TGGGCAATATGAGCTATTCGTATTATTTGATTCATGGCTTGGCCTTGCATGCAGGCTTTATGCTGCTTGCTAAATTACTG CCCGCTACCCCGACGGCTGGCTGGTTCTTTTGGCTGATCTTGCCGTTGATGTTTGGCTTGACGCTGGTGGTTGGCGCAGC GTTATTTATTGTGGTTGAACATCCAATGTCGCTGAAAAACAATGCCAAACCTGCGGTTGAACCGCGTGATCCAGAAGTTC GCCCAGCCCTCAACGCTGACGCTGCCTAA
Upstream 100 bases:
>100_bases TGTTTGGCATTGTTGCTGCCTGTGGCGGTGATTCTTTGAGTTCTGAGTTTTTTGCAGTGTGGGGCATCGATTGGTTGGCG AATTTTGCTGAGGAGGCATT
Downstream 100 bases:
>100_bases CTTTCAAACCAGCCCTTTTCAGCTATCATGCAGAGGGCTGGTTTCTTTTTAGTTGAGGTGGCTATGGCTGAAATTCGTGT TGCGACGGTGGCTGATGCGG
Product: acyltransferase 3
Products: NA
Alternate protein names: O-Antigen Acetylase; Acyltransferase-Like Protein; Acyltransferase
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MAFFRQRFELARGLAGTNLRSMEGLRGIAVFLVFLVHFRSSIQPWLFSDSPTATINNALAMVGNTGVDLFFVLSGYLIYA SLIKRQQAYMGFIGRRIRRIYPTFFVIFMVYLGLSILFPAESKIPSGVTAATLYFIQNLIFLPGLLPIEPMITVAWSLSY EVFYYLIMPVIVVAIGLRGKTPQWRIGFFSVVGVVLTAVCIIWQGPLKLAMFIAGILLHELLESYRERTPAAWLGLLGLV MGTCAPLLPLTGTLGNAIRFTLIFSGFLLVCWHCFSQTESWLKQALSWTPLRWLGNMSYSYYLIHGLALHAGFMLLAKLL PATPTAGWFFWLILPLMFGLTLVVGAALFIVVEHPMSLKNNAKPAVEPRDPEVRPALNADAA
Sequences:
>Translated_382_residues MAFFRQRFELARGLAGTNLRSMEGLRGIAVFLVFLVHFRSSIQPWLFSDSPTATINNALAMVGNTGVDLFFVLSGYLIYA SLIKRQQAYMGFIGRRIRRIYPTFFVIFMVYLGLSILFPAESKIPSGVTAATLYFIQNLIFLPGLLPIEPMITVAWSLSY EVFYYLIMPVIVVAIGLRGKTPQWRIGFFSVVGVVLTAVCIIWQGPLKLAMFIAGILLHELLESYRERTPAAWLGLLGLV MGTCAPLLPLTGTLGNAIRFTLIFSGFLLVCWHCFSQTESWLKQALSWTPLRWLGNMSYSYYLIHGLALHAGFMLLAKLL PATPTAGWFFWLILPLMFGLTLVVGAALFIVVEHPMSLKNNAKPAVEPRDPEVRPALNADAA >Mature_381_residues AFFRQRFELARGLAGTNLRSMEGLRGIAVFLVFLVHFRSSIQPWLFSDSPTATINNALAMVGNTGVDLFFVLSGYLIYAS LIKRQQAYMGFIGRRIRRIYPTFFVIFMVYLGLSILFPAESKIPSGVTAATLYFIQNLIFLPGLLPIEPMITVAWSLSYE VFYYLIMPVIVVAIGLRGKTPQWRIGFFSVVGVVLTAVCIIWQGPLKLAMFIAGILLHELLESYRERTPAAWLGLLGLVM GTCAPLLPLTGTLGNAIRFTLIFSGFLLVCWHCFSQTESWLKQALSWTPLRWLGNMSYSYYLIHGLALHAGFMLLAKLLP ATPTAGWFFWLILPLMFGLTLVVGAALFIVVEHPMSLKNNAKPAVEPRDPEVRPALNADAA
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17559544, Length=325, Percent_Identity=26.7692307692308, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17507735, Length=348, Percent_Identity=26.4367816091954, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17507733, Length=352, Percent_Identity=26.7045454545455, Blast_Score=68, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17559158, Length=310, Percent_Identity=27.0967741935484, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42613; Mature: 42481
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFFRQRFELARGLAGTNLRSMEGLRGIAVFLVFLVHFRSSIQPWLFSDSPTATINNALA CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHH MVGNTGVDLFFVLSGYLIYASLIKRQQAYMGFIGRRIRRIYPTFFVIFMVYLGLSILFPA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ESKIPSGVTAATLYFIQNLIFLPGLLPIEPMITVAWSLSYEVFYYLIMPVIVVAIGLRGK CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TPQWRIGFFSVVGVVLTAVCIIWQGPLKLAMFIAGILLHELLESYRERTPAAWLGLLGLV CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH MGTCAPLLPLTGTLGNAIRFTLIFSGFLLVCWHCFSQTESWLKQALSWTPLRWLGNMSYS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHH YYLIHGLALHAGFMLLAKLLPATPTAGWFFWLILPLMFGLTLVVGAALFIVVEHPMSLKN HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NAKPAVEPRDPEVRPALNADAA CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AFFRQRFELARGLAGTNLRSMEGLRGIAVFLVFLVHFRSSIQPWLFSDSPTATINNALA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHH MVGNTGVDLFFVLSGYLIYASLIKRQQAYMGFIGRRIRRIYPTFFVIFMVYLGLSILFPA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ESKIPSGVTAATLYFIQNLIFLPGLLPIEPMITVAWSLSYEVFYYLIMPVIVVAIGLRGK CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TPQWRIGFFSVVGVVLTAVCIIWQGPLKLAMFIAGILLHELLESYRERTPAAWLGLLGLV CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH MGTCAPLLPLTGTLGNAIRFTLIFSGFLLVCWHCFSQTESWLKQALSWTPLRWLGNMSYS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHH YYLIHGLALHAGFMLLAKLLPATPTAGWFFWLILPLMFGLTLVVGAALFIVVEHPMSLKN HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NAKPAVEPRDPEVRPALNADAA CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA