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The map label for this gene is cynT [C]

Identifier: 159900118

GI number: 159900118

Start: 4531030

End: 4531746

Strand: Reverse

Name: cynT [C]

Synonym: Haur_3601

Alternate gene names: 159900118

Gene position: 4531746-4531030 (Counterclockwise)

Preceding gene: 159900119

Following gene: 159900117

Centisome position: 71.4

GC content: 51.32

Gene sequence:

>717_bases
ATGGATGTGCGCAAACTATCGCGACGACAATTTTTAGGTGTGTCGGGAGTTGCGACGTTAGGTTTATTGGCTGGTTGCGG
AGCTGAAGAAACCATCAAGCCTGCGGCAACCGCTGAGCCAACTGAATTTAACGCCGATAGTGCGTTACAACTGCTCAAAG
ATGGCAATGCCCGTTTTGTGGCCAATCTTACGGTTGACCCCAACCAAGATCCCAATCGCCGCACAACCACGGCCAAAGGC
CAAAACCCCTTTGCCACAATTGTTGGCTGTGTCGATTCGCGGGTTGGGCCAGAAGTGGTATTTGATCGCGGGATTGGCGA
TTTGTTTGTGGTGCGCACGGCAGGCCAAGTGATTGATGACGTGGCGATTGGCAGCATCGAATTTGGAACTGCTGAGTTGG
GTATTCCTTTGGTGATGGTTTTGGGCCATCAAAAATGTGGTGCCGTAACCGCTACGATCGAATCGGTTGAAAAAAACACG
CCTGCGCCCGACCAAATTGCCGCAATCGTTGAGCACATTCGGCCTGCGGTTGAGGCCGTCAAGGCTTCAGGCCAAGAACC
AAGCGATTTGGTTGACGCAGTGGTGCGCGAAAATACCAAATTAACCGTGGCTGCCTTGAAAGCAGCGCCATTGTTGGCTC
AACTTGAGTCTGAAGGTAAAGTCCGAATTATCGGCGGCTACTACCATTTAGATAGTGGCACTGTCGAATTTTTCTAG

Upstream 100 bases:

>100_bases
AATTCGGGTCTTTTTGGAGCAGGCTCAACAGGGTTGATTGGCGCAAACGTTAGGGCTATAATGGGCAAGTTTGATTCTAG
CTATCTAAGGAGTAGCCCTC

Downstream 100 bases:

>100_bases
GCTTGGGTCATTAGATACGTATCTTGGGTAGCGGAACCATAACAGTGTTGGAGCCAAGGCTTGGTATGCTGGTAGCAATG
ATGCTTTGCATACAAGGAAA

Product: carbonic anhydrase

Products: NA

Alternate protein names: Carbonate dehydratase [H]

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MDVRKLSRRQFLGVSGVATLGLLAGCGAEETIKPAATAEPTEFNADSALQLLKDGNARFVANLTVDPNQDPNRRTTTAKG
QNPFATIVGCVDSRVGPEVVFDRGIGDLFVVRTAGQVIDDVAIGSIEFGTAELGIPLVMVLGHQKCGAVTATIESVEKNT
PAPDQIAAIVEHIRPAVEAVKASGQEPSDLVDAVVRENTKLTVAALKAAPLLAQLESEGKVRIIGGYYHLDSGTVEFF

Sequences:

>Translated_238_residues
MDVRKLSRRQFLGVSGVATLGLLAGCGAEETIKPAATAEPTEFNADSALQLLKDGNARFVANLTVDPNQDPNRRTTTAKG
QNPFATIVGCVDSRVGPEVVFDRGIGDLFVVRTAGQVIDDVAIGSIEFGTAELGIPLVMVLGHQKCGAVTATIESVEKNT
PAPDQIAAIVEHIRPAVEAVKASGQEPSDLVDAVVRENTKLTVAALKAAPLLAQLESEGKVRIIGGYYHLDSGTVEFF
>Mature_238_residues
MDVRKLSRRQFLGVSGVATLGLLAGCGAEETIKPAATAEPTEFNADSALQLLKDGNARFVANLTVDPNQDPNRRTTTAKG
QNPFATIVGCVDSRVGPEVVFDRGIGDLFVVRTAGQVIDDVAIGSIEFGTAELGIPLVMVLGHQKCGAVTATIESVEKNT
PAPDQIAAIVEHIRPAVEAVKASGQEPSDLVDAVVRENTKLTVAALKAAPLLAQLESEGKVRIIGGYYHLDSGTVEFF

Specific function: Catalyzes the reversible hydration of carbon dioxide to form bicarbonate [H]

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI1786534, Length=171, Percent_Identity=32.7485380116959, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765
- InterPro:   IPR015892 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 25034; Mature: 25034

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVRKLSRRQFLGVSGVATLGLLAGCGAEETIKPAATAEPTEFNADSALQLLKDGNARFV
CCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE
ANLTVDPNQDPNRRTTTAKGQNPFATIVGCVDSRVGPEVVFDRGIGDLFVVRTAGQVIDD
EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHEEECCCCCEEEEEHHHHHHHH
VAIGSIEFGTAELGIPLVMVLGHQKCGAVTATIESVEKNTPAPDQIAAIVEHIRPAVEAV
HHCCCEECCCHHHCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
KASGQEPSDLVDAVVRENTKLTVAALKAAPLLAQLESEGKVRIIGGYYHLDSGTVEFF
HHCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCEEEEEEEEEECCCEEECC
>Mature Secondary Structure
MDVRKLSRRQFLGVSGVATLGLLAGCGAEETIKPAATAEPTEFNADSALQLLKDGNARFV
CCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE
ANLTVDPNQDPNRRTTTAKGQNPFATIVGCVDSRVGPEVVFDRGIGDLFVVRTAGQVIDD
EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHEEECCCCCEEEEEHHHHHHHH
VAIGSIEFGTAELGIPLVMVLGHQKCGAVTATIESVEKNTPAPDQIAAIVEHIRPAVEAV
HHCCCEECCCHHHCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
KASGQEPSDLVDAVVRENTKLTVAALKAAPLLAQLESEGKVRIIGGYYHLDSGTVEFF
HHCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCEEEEEEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA