| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is catD [H]
Identifier: 159900119
GI number: 159900119
Start: 4531810
End: 4532604
Strand: Reverse
Name: catD [H]
Synonym: Haur_3602
Alternate gene names: 159900119
Gene position: 4532604-4531810 (Counterclockwise)
Preceding gene: 159900128
Following gene: 159900118
Centisome position: 71.42
GC content: 51.19
Gene sequence:
>795_bases ATGCCGCCGATTGACGTTCGTGGTCATAGTTTGATGTACGATGATGGTGGTGATGGCGAGGTGGTGTTGTGTATCCATGG GTTTCCCTTCAATCGTTCGATGTGGGATGAAGCGCGATTGGCCTTAGCTAGTCGTTATCGGGTGCTTAGCCCCGATTTAC GTGGTTTTGGCGAATCAAGTGGCAGCGAGAGTTGGACGCTCGACGATCAGGCCAATGATTTAATTGAATTATTGGATCAG TTGGGAATTGATCGGGTGGCCGTGCTTGGTTTATCGATGGGTGGTTATATTGCACTGAATTTGGCGCGACGCTACCCTGA GCGTTTGTGGGCAATGGTGTTAATTGATACCAAAGCTACATCTGATAATTACGATGCTAAGCAAAATCGCTTGAAAACCG CTGAGACCGCTCTCCGCGAAGGTGCAGCCCCGATTGCCGCCCAAATGTTGCCTAAATTGCTCAGCCCCGCCAATGCTGAT GATCAGCGTTTAATTGAGCGGCTCAATAGTATGATGCTCACGACCAATCCCAAAACGATTGCCAGCGCAGCCCATGCCAT GGCCAGTCGCCCTGATTCAACGCCCTATCTTTCGACCATGGCGCTGCCAAGCATGGTGATTGTTGGCAACGACGACCAAA TTACCACGCCCAATGATGCCCATGCCATGGTTGCTGCCCTGCCACACGCCAGTTTAGTGACGATTCCCGATGCTGGGCAT ATGAGTGTTTTGGAGCAACCAGAAATTGCCTATGGCGCAATTCGGGTCTTTTTGGAGCAGGCTCAACAGGGTTGA
Upstream 100 bases:
>100_bases CCGGGACGCATATAAAGCTGCCAGTTCATTATGACCCTCCTAGCATGCTATTGTACCGCGTCCACGATCAACGAGTGTAT TTTTTGGAAGGAGCTAGCTC
Downstream 100 bases:
>100_bases TTGGCGCAAACGTTAGGGCTATAATGGGCAAGTTTGATTCTAGCTATCTAAGGAGTAGCCCTCATGGATGTGCGCAAACT ATCGCGACGACAATTTTTAG
Product: alpha/beta hydrolase fold-domain containing protein
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MPPIDVRGHSLMYDDGGDGEVVLCIHGFPFNRSMWDEARLALASRYRVLSPDLRGFGESSGSESWTLDDQANDLIELLDQ LGIDRVAVLGLSMGGYIALNLARRYPERLWAMVLIDTKATSDNYDAKQNRLKTAETALREGAAPIAAQMLPKLLSPANAD DQRLIERLNSMMLTTNPKTIASAAHAMASRPDSTPYLSTMALPSMVIVGNDDQITTPNDAHAMVAALPHASLVTIPDAGH MSVLEQPEIAYGAIRVFLEQAQQG
Sequences:
>Translated_264_residues MPPIDVRGHSLMYDDGGDGEVVLCIHGFPFNRSMWDEARLALASRYRVLSPDLRGFGESSGSESWTLDDQANDLIELLDQ LGIDRVAVLGLSMGGYIALNLARRYPERLWAMVLIDTKATSDNYDAKQNRLKTAETALREGAAPIAAQMLPKLLSPANAD DQRLIERLNSMMLTTNPKTIASAAHAMASRPDSTPYLSTMALPSMVIVGNDDQITTPNDAHAMVAALPHASLVTIPDAGH MSVLEQPEIAYGAIRVFLEQAQQG >Mature_263_residues PPIDVRGHSLMYDDGGDGEVVLCIHGFPFNRSMWDEARLALASRYRVLSPDLRGFGESSGSESWTLDDQANDLIELLDQL GIDRVAVLGLSMGGYIALNLARRYPERLWAMVLIDTKATSDNYDAKQNRLKTAETALREGAAPIAAQMLPKLLSPANADD QRLIERLNSMMLTTNPKTIASAAHAMASRPDSTPYLSTMALPSMVIVGNDDQITTPNDAHAMVAALPHASLVTIPDAGHM SVLEQPEIAYGAIRVFLEQAQQG
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI23200012, Length=264, Percent_Identity=27.6515151515151, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI23200008, Length=264, Percent_Identity=27.6515151515151, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 28687; Mature: 28556
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPIDVRGHSLMYDDGGDGEVVLCIHGFPFNRSMWDEARLALASRYRVLSPDLRGFGESS CCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCC GSESWTLDDQANDLIELLDQLGIDRVAVLGLSMGGYIALNLARRYPERLWAMVLIDTKAT CCCCEEECCHHHHHHHHHHHHCCCCEEHHHCCCCCHHHHHHHHHHHHHHEEEEEEECCCC SDNYDAKQNRLKTAETALREGAAPIAAQMLPKLLSPANADDQRLIERLNSMMLTTNPKTI CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECCCHHH ASAAHAMASRPDSTPYLSTMALPSMVIVGNDDQITTPNDAHAMVAALPHASLVTIPDAGH HHHHHHHHCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEECCCCC MSVLEQPEIAYGAIRVFLEQAQQG CHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PPIDVRGHSLMYDDGGDGEVVLCIHGFPFNRSMWDEARLALASRYRVLSPDLRGFGESS CCCCCCCCEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCC GSESWTLDDQANDLIELLDQLGIDRVAVLGLSMGGYIALNLARRYPERLWAMVLIDTKAT CCCCEEECCHHHHHHHHHHHHCCCCEEHHHCCCCCHHHHHHHHHHHHHHEEEEEEECCCC SDNYDAKQNRLKTAETALREGAAPIAAQMLPKLLSPANADDQRLIERLNSMMLTTNPKTI CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECCCHHH ASAAHAMASRPDSTPYLSTMALPSMVIVGNDDQITTPNDAHAMVAALPHASLVTIPDAGH HHHHHHHHCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEECCCCC MSVLEQPEIAYGAIRVFLEQAQQG CHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]